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Molecular Basis of Self-incompatibility in Fruit Tree Species in Prunus

Research Project

Project/Area Number 17380021
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Horticulture/Landscape architecture
Research InstitutionKyoto University

Principal Investigator

TAO Ryutaro  Kyoto University, Graduate School of Agriculture, Associate Professor (10211997)

Co-Investigator(Kenkyū-buntansha) YAMANE Hisayo  Kyoto University, Graduate School of Agriculture, Assistant Professor (80335306)
HABU Tsuyoshi  Kyoto University, Graduate School of Agriculture, Assistant Professor (60335304)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥13,910,000 (Direct Cost: ¥13,100,000、Indirect Cost: ¥810,000)
Fiscal Year 2007: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2006: ¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2005: ¥6,900,000 (Direct Cost: ¥6,900,000)
Keywordsalmond / apricot / cherry / Japanese apricot / plum / SFB / stone fruit / S-RNase / 自家不和合性
Research Abstract

It has been known that the specificity of the self-incompatibility system in Prunus is determined by the pistil- and pollen-determinants, S-RNase (S-ribonuclease) and SFB (S haplotype-specific F-box protein), respectively; however, the molecular mechanism underlying the self-incompatibility reaction is still unclear. This study was conducted to elucidate the molecular basis of the gametophytic self-incompatibility system in Prunus (Rosaceae). To this end, we cloned and sequenced the Slocus region of several self-compatible mutant S haplotypes of cherries, almonds, Japanese apricots, and Japanese plums. It appeared that most of the self-compatible S haplotypes encode truncated dysfunctional SFB, indicating that mutation in SFB confers self-compatibility in Prunus. Molecular cloning of the self-compatible peach also indicated that SC in peach is conferred by mutation in its SFB. These observations are in contrast to the solanaceous self-incompatibility system, in which dysfunction in the pollen-determinant leads to self- and cross-incompatibilities. Furthermore, genetic and molecular analyses using the tetraploid sour cherry demonstrated that the presence of two different pollen S alleles in a pollen grain does not confer self-compatibility in Prunus. Namely, the well-known phenomenon of competitive interaction is ablsent in Prunus, as opposed to the solanaceous system. Based on these results, we have proposed the one-allele match model to explain the molecular basis of self-incompatibility system in Prunus.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (43 results)

All 2008 2007 2006 2005

All Journal Article (35 results) (of which Peer Reviewed: 16 results) Presentation (8 results)

  • [Journal Article] Characterization of a novel self-compatible S^3 haplotype leads to the development of a universal PCR marker for two distinctly originated self-compatible S haplotypes in Japanese apricot (Prunus mume sieb. et Zucc.)2008

    • Author(s)
      Yamane, H., et al.
    • Journal Title

      J. Japan. Soc. Hort. Sci. 78

      Pages: 40-48

    • NAID

      110007044037

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The Prunus self-incompatibility locus (S locus) is seldom rearranged2008

    • Author(s)
      Viera, J., et al.
    • Journal Title

      J. Hered. 99

      Pages: 657-660

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Cloning and characterization of twelve S-RNase alleles in Japanese apricot (Prunus mume Sieb. et Zucc)2008

    • Author(s)
      Habu, T., et al.
    • Journal Title

      J. Japan. Soc. Hort. Sci. 77

      Pages: 374-381

    • NAID

      110006975674

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Genetic and molecular characterization ofthree novel S-haplotypes in sour cherry (Prunus-cerasus L. )2008

    • Author(s)
      Tsukamoto, T., et al.
    • Journal Title

      J. Exp. Bot. 59

      Pages: 3169-3185

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The number. age, sharing and relatedness of S-locus specificities in Prunus2008

    • Author(s)
      Viera, J., et al.
    • Journal Title

      Genet. Res., Camb. 90

      Pages: 17-26

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] PCR markers for mutated S-haplotypes enable discrimination between self-incompatible and self-compatible sour cherry selections2008

    • Author(s)
      Tsukamoto, T., et al.
    • Journal Title

      Mol. Breed. 21

      Pages: 67-80

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Characterization of a novel self-compatible S haplotype leads to the development of a universal PCR marker for two distinctly originated self-compatible S haplotypes in Japanese apricot (Prunus mume sieb. et Zucc.)2008

    • Author(s)
      Yamane, H., et al.
    • Journal Title

      J. Japan. Soc. Hort. Sci. 78

      Pages: 40-48

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The Prunus self-incompatibility locus (S locus) is seldom rearranged.2008

    • Author(s)
      Viera, J., et al.
    • Journal Title

      J. Hered. 99

      Pages: 657-660

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Cloning and characterization of twelve S-RNase alleles in Japanese apricot(Prunus mume Sieb. et Zucc).2008

    • Author(s)
      Habu, T., et al.
    • Journal Title

      J. Japan. Soc. Hort. Sci. 77

      Pages: 374-381

    • NAID

      110006975674

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Genetic and molecular characterization of three novel S-haplotypes in sour cherry (Prunus cerasusL.).2008

    • Author(s)
      Tsukamoto, T., et al.
    • Journal Title

      J. Exp. Bot. 59

      Pages: 3169-3185

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The number, age, sharing and relatedness of S- locus specificities in Prun us. Genet.2008

    • Author(s)
      Viera, J., N. A. Fonseca, R. A. M. Santos, T. Habu, R. Tao, C. P. Viera.
    • Journal Title

      Res., Camb. 90

      Pages: 17-26

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Characterization of SLFL1, a pollen-expressed F-box gene located in the Prunus Slocus.2008

    • Author(s)
      Matsumoto, D., et al.
    • Journal Title

      Sex. Plant Reprd. 21

      Pages: 113-121

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] PCR markers, for mutated S-haplotypes enable discrimination between self-incompatible and self-compatible sour cherry selections.2008

    • Author(s)
      Tsukamoto, T., et al.
    • Journal Title

      Mol. Breed. 21

      Pages: 67-80

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Accumulation of nonfunctional S-haplotypes results in the breakdown of gametophytic self-incompatibility in tetraploid Prunus.2008

    • Author(s)
      Hauck, N. R., et al.
    • Journal Title

      Genetics 172

      Pages: 1191-1198

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Alow transcriptional level of S^e-RNase in the S^e-haplotype confers self-compatibility in Japanese plum2007

    • Author(s)
      Watari, A., et al.
    • Journal Title

      J. Amer. Soc. Hot. Sci. 76

      Pages: 396-406

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Self-compatible peach (Prunus persica) has mutant versions of the S haplotypes found in self-incompatible Prunus species2007

    • Author(s)
      Tao, R., et al.
    • Journal Title

      Plant Mol. Biol. 63

      Pages: 109-123

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A low transcriptional level of S^e-RNase in the S^e-haplotype confers self-compatibility in Japanese plum.2007

    • Author(s)
      Watari, A., et al.
    • Journal Title

      J. Amer. 132

      Pages: 396-406

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Self-compatible peach (Prunus persica) has mutant versions of the S haplotypes found in self-incompatible Prun us species.2007

    • Author(s)
      Tao, R., et al.
    • Journal Title

      Plant Mol. Biol. 63

      Pages: 109-123

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Self-comatible peach (Prunus persica) has mutant versions of the S haplotypes found in self-incompatible Prunus species.2007

    • Author(s)
      Tao, R., A. Watari, T. Hanada, T. Habu, H. Yaegaki, M. Yamaguchi, and H. Yamane
    • Journal Title

      Plant Molecular Biology 63

      Pages: 109-123

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A low transcriptional level of Se-RNase in the Se-haplotype confers self-compatibility in Japanese plum.2007

    • Author(s)
      Watari, A., T. Hanada, H. Yamane, T. Esumi, R. Tao, H. Yaegaki, M. Yamaguchi, K. Beppu, and I. Kataoka.
    • Journal Title

      J. Amer. Soc. Hort. Sci. 132

      Pages: 396-406

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular characterization of three non-functional S-haplotypes in sour cherry (Prunus cerasus)2006

    • Author(s)
      Tsukamoto, T., et al.
    • Journal Title

      Plant Mol. Biol. 62

      Pages: 371-383

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A simple and rapid procedure for the detection of self-compatible individuals in Japanese apricot (Prunus mume Sieb. et Zucc. ) using loop-mediated isothermal amplification (LAMP) method2006

    • Author(s)
      Habu, T., et al.
    • Journal Title

      HortScience 41

      Pages: 1156-1158

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Accumulation of nonfunctional S-haplotypes results in the breakdown of gametophytic self-incompatibility in tetraploid Prunus2006

    • Author(s)
      Hauck, N. R., et al.
    • Journal Title

      Genetics 172

      Pages: 1191-1198

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The mutated Sr haplotype specific F-box protein gene.2006

    • Author(s)
      Hauck, N. R., et al.
    • Journal Title

      J. Hered. 97

      Pages: 514-520

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Molecular characterization of three non-functional ^-haplotypes in sour cherry (Prunus cerasus).2006

    • Author(s)
      Tsukamoto, T., et al.
    • Journal Title

      Plant Mol. Riol. 62

      Pages: 371-383

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] A simple and rapid procedure for the detection of self-compatible individuals in Japanese apricot (Prunus mume Sieb. et Zucc.) using loop-mediated isothermal amplification (LAMP) method.2006

    • Author(s)
      Habu, T., et al.
    • Journal Title

      HortScience 41

      Pages: 1156-1158

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The mutated S1-haplotype specific F-box protein gene2006

    • Author(s)
      Hauck, N.R., K.Ikeda, R.Tao, A.F.Iezzoni.
    • Journal Title

      Journal of Heredity 97

      Pages: 1156-1158

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Accumulation of nonfunctional S-haplotypes results in the breakdown of gametophytic self-incompatibility in tetraploid Prunus2006

    • Author(s)
      Hauck, N.R., H.Yamane, R.Tao, A.F.Iezzoni
    • Journal Title

      Genetics 172

      Pages: 1191-1198

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Molecular characterization of three non-functional S-haplotypes in sour cherry (Prunus cerasus)2006

    • Author(s)
      Tsukamoto, T., N.R.Hauck, R.Tao, N.Jiang, A.F.Iezzoni
    • Journal Title

      Plant Molecular Biology 62

      Pages: 371-383

    • Related Report
      2006 Annual Research Report
  • [Journal Article] S^e-haplotype confers self-compatibility in Japanse plum (Prunus salicina Lindl. )2005

    • Author(s)
      Beppu, K., et al.
    • Journal Title

      J. Hortic. Sci. & Biotech. 80

      Pages: 760-764

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A coupled yeast signal sequence trap and transient plant expression strategy to identify genes encoding secreted proteins from peach pistils2005

    • Author(s)
      Yamane, H., et al.
    • Journal Title

      J. Exp. Bot. 56

      Pages: 2229-2238

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Linkage and physical distances between the S-haplotype S-RNase and SFB genes in sweet cherry2005

    • Author(s)
      Ikeda, K., et al.
    • Journal Title

      Sex. Plant Reprod. 17

      Pages: 289-296

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] S^e-haplotype confers self-compatibility in Japanse plum (Prunus salicina Lindl.).2005

    • Author(s)
      Beppu, K., et al.
    • Journal Title

      J. Hortic. Sci. and Biotech. 80

      Pages: 760-764

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Linkage and physical distances between the 5-haplotype S-RNase and SFB genes in sweet cherry.2005

    • Author(s)
      Ikeda, K., et al.
    • Journal Title

      Sex. Plant Reprod. 17

      Pages: 289-296

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] A coupled yeast signal sequence trap and transient plant expression strategy to identify genes encoding secreted proteins from peach pistils.2005

    • Author(s)
      Yamane H, S.J.Lee, B.D.Kim, R.Tao, J.C.Rose
    • Journal Title

      Journal of Experimental Botany 56

      Pages: 2229-2238

    • Related Report
      2005 Annual Research Report
  • [Presentation] A distinct recognition mechanism in the gametophytic self-incompatibility system in Prunus2008

    • Author(s)
      Tao, R., et al.
    • Organizer
      The 4th Intemational Rosaceae Genomics Conference
    • Place of Presentation
      Pucon, Chile
    • Year and Date
      2008-03-16
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] A distinct recognition mechanism in the gametophytic self-incompatibility system in Prvnus.2008

    • Author(s)
      Tao, R., et al.
    • Organizer
      The 4th International Rosaceae Genomics Conference.
    • Place of Presentation
      Pucon Chile.
    • Year and Date
      2008-03-16
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Cloning of self-compatible S^f locus in almond2007

    • Author(s)
      Tao, R., et al.
    • Organizer
      Eucarpia XII Fruit Section-Symposium
    • Place of Presentation
      Zaragosa, Spain
    • Year and Date
      2007-09-16
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Cloning of self-compatible Sf locus in almond.2007

    • Author(s)
      Tao, R., et al.
    • Organizer
      Ecuarpia XII Fruit Section Symposium.
    • Place of Presentation
      Zaragosa, Spain.
    • Year and Date
      2007-09-16
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Self-compatible peach has mutant versions of the S locus genes2006

    • Author(s)
      Tao, R., et al.
    • Organizer
      The 3rd International Rosaceae Genomics Conference
    • Place of Presentation
      Napier, New Zealand
    • Year and Date
      2006-03-19
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Self-compatible peach has mutant versions of the S locus genes.2006

    • Author(s)
      Tao, R., et al.
    • Organizer
      The 3rd International Rosaceae Genomic Conference.
    • Place of Presentation
      Napier, New Zealand.
    • Year and Date
      2006-03-19
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Molecular markers for the self-compatible S^4-haplotype2005

    • Author(s)
      Tao, R., et al.
    • Organizer
      The 5th International Cherry Symposium
    • Place of Presentation
      Bursa, Turkey
    • Year and Date
      2005-06-06
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Molecular markers for the self-compatible S4'-haplotype.2005

    • Author(s)
      Tao, R., et al.
    • Organizer
      The 5th International Cherry Symposium.
    • Place of Presentation
      Bursa, Turkey.
    • Year and Date
      2005-06-06
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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