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Identification of colorectal cancer driver genes involved in cancer development and therapeutic resistance.

Research Project

Project/Area Number 17H03586
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Tumor biology
Research InstitutionNational Cancer Center Japan (2019-2020)
Kanazawa University (2017-2018)

Principal Investigator

Takeda Haruna  国立研究開発法人国立がん研究センター, 研究所, ユニット長 (80647975)

Project Period (FY) 2017-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Fiscal Year 2019: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2018: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2017: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords大腸がん / マウスモデル / がんドライバー遺伝子 / オルガノイド / 大腸がん抑制遺伝子 / CRISPR-Cas9 / モデルマウス / トランスポゾン / ドライバー遺伝子 / 薬剤抵抗性 / がん抑制遺伝子 / 薬剤耐性 / 治療抵抗性 / スクリーニング / 癌 / ゲノム / 遺伝子 / 遺伝学 / 動物
Outline of Final Research Achievements

Colorectal cancer (CRC) is the third leading cause of cancer-related deaths worldwide. In our previous study, we performed genome-wide Sleeping Beauty transposon-based mutagenesis screening in mice and provided comprehensive datasets of candidate CRC driver genes. However, functional validation for most candidate CRC driver genes has not been performed. Here, we describe a platform for functionally validating CRC driver genes that utilizes CRISPR-Cas9 in mouse intestinal tumor organoids in xenograft models. We used genetically defined benign tumor-derived organoids carrying mutations in Apc and Kras. These studies showed that Acvr1b, Acvr2a and Arid2 could function as tumor suppressor genes in CRC. This experimental system can also be applied to mouse intestinal organoids carrying other sensitizing mutations as well as organoids derived from other organs, which could further contribute to identification of novel cancer driver genes and new drug targets.

Academic Significance and Societal Importance of the Research Achievements

本研究のオルガノイドを用いたがん化能検証実験系は、多くの組織に応用可能であり、急速に進むがんゲノム解読研究から明らかにされる多くの変異遺伝子が、がん形成に寄与する変異であるかを生体内で効率的に検証する方法として利用できる。今後のがん研究は、ゲノム解読によって同定された変異遺伝子の機能検証を行う方向に展開していくと考えられ、本研究で確立した方法が、がんの機序解明に大きく貢献できると考えられる。

Report

(4 results)
  • 2020 Final Research Report ( PDF )
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (17 results)

All 2020 2019 2018 2017 Other

All Journal Article (4 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 3 results,  Open Access: 3 results) Presentation (12 results) (of which Int'l Joint Research: 7 results,  Invited: 7 results) Remarks (1 results)

  • [Journal Article] CRISPR-Cas9と消化管由来オルガノイドを用いた大腸がんドライバー遺伝子の機能検証2020

    • Author(s)
      武田はるな
    • Journal Title

      消化器病学サイエンス

      Volume: 4 Pages: 55-58

    • Related Report
      2019 Annual Research Report
  • [Journal Article] CRISPR-Cas9 mediated gene knockout in intestinal tumor organoids provides functional validation for colorectal cancer driver genes.2019

    • Author(s)
      Takeda H, Kataoka S, Nakayama M, Ali MAE, Oshima H, Yamamoto D, Park JW, Takegami Y, An T, Jenkins NA, Copeland NG, and Oshima M.
    • Journal Title

      Proc Natl Acad Sci USA

      Volume: 116 Issue: 31 Pages: 15635-15644

    • DOI

      10.1073/pnas.1904714116

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Activation of Erk in ileal epithelial cells engaged in ischemic-injury repair2017

    • Author(s)
      Takeda Haruna、Kiyokawa Etsuko
    • Journal Title

      Sci Rep.

      Volume: 7 Issue: 1 Pages: 1-11

    • DOI

      10.1038/s41598-017-16714-6

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] p120-Catenin is an obligate haploinsufficient tumor suppressor in intestinal neoplasia2017

    • Author(s)
      1.Sarah P. Short, Jumpei Kondo, Whitney G. Smalley-Freed, Haruna Takeda, Michael R. Dohn, Anne E. Powell, Robert H. Carnahan, Mary K. Washington, Manish Tripathi, D. Michael Payne, Nancy A. Jenkins, Neal G. Copeland, Robert J. Coffey and Albert B. Reynolds
    • Journal Title

      J Clin Invest.

      Volume: 127 Pages: 4462-4476

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] マウス消化管腫瘍由来のオルガノイドとCRISPR-Cas9を用いたがん化能検証実験系の確立2019

    • Author(s)
      武田はるな
    • Organizer
      第42回日本分子生物学会
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] CRISPR-Cas9-mediated gene knockout in intestinal tumor organoids provides functional validation for colorectal cancer driver genes2019

    • Author(s)
      武田はるな
    • Organizer
      2.Duke-NUS joint symposium, Kanazawa, Ishikawa, Japan
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] マウス消化管腫瘍由来のオルガノイドとCRISPR-Cas9を用いたがん化能検証実験系の確立2019

    • Author(s)
      武田はるな
    • Organizer
      3.蛋白研セミナー, 大阪大学 微生物病研究所 谷口記念講堂
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] CRISPR-Cas9 screening in organoids identified Acvr2a, Acvr1b and Arid2 as colorectal tumor suppressor genes2019

    • Author(s)
      Haruna Takeda
    • Organizer
      11th AACR-JCA Joint Conference
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Sleeping Beauty トランスポゾンを用いた大腸がん悪性化に関与する遺伝子の同定2019

    • Author(s)
      武田はるな
    • Organizer
      第一回 日本医学会連合Rising Starリトリート
    • Related Report
      2018 Annual Research Report
  • [Presentation] Sleeping Beauty transposon mutagenesis identifies genes involved in colorectal cancer progression2018

    • Author(s)
      Haruna Takeda
    • Organizer
      AACR Annual Meeting 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Sleeping Beauty (SB) トランスポゾンを用いた大腸がん形成に関与する遺伝子の同定2018

    • Author(s)
      武田はるな
    • Organizer
      第65回日本実験動物学会総会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Sleeping Beauty transposon mutagenesis identified genes involved in colorectal cancer progression2018

    • Author(s)
      武田はるな
    • Organizer
      国立遺伝学研究所国際シンポジウム 2018, Genome Editing and Functional Genomics
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Sleeping Beautyトランスポゾンを用いた大腸がん形成に関与する遺伝子の同定2018

    • Author(s)
      武田はるな
    • Organizer
      第77回日本癌学会学術総会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] マウスモデルを用いた大腸がんドライバー遺伝子の同定と機能評価2017

    • Author(s)
      武田はるな
    • Organizer
      共同利用・共同研究拠点シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Identification of driver genes promoting colorectal tumorigenesis2017

    • Author(s)
      武田はるな
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of colorectal cancer driver genes2017

    • Author(s)
      武田はるな
    • Organizer
      XVIth KICancer & StratCan Retreat
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Remarks] 国立がん研究センター内の研究内容に関するページ

    • URL

      https://www.ncc.go.jp/jp/ri/division/molecular_genetics/index.html

    • Related Report
      2019 Annual Research Report

URL: 

Published: 2017-04-28   Modified: 2022-01-27  

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