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CRISPR/Cas9 mediated identification of novel gene targets for XPA-associated skin cancer using in vitro reconstituted skin from iPS cells

Research Project

Project/Area Number 17K07165
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Tumor biology
Research InstitutionKyoto University

Principal Investigator

Oceguera-Yanez Fabian  京都大学, iPS細胞研究所, 特命助教 (80751304)

Co-Investigator(Kenkyū-buntansha) ウォルツェン クヌート  京都大学, iPS細胞研究所, 准教授 (50589489)
Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2019: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2017: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsHuman iPSCs / CRISPR/Cas9 / Squamous Cell Carcinoma / Skin differentiation / Xeroderma pigmentosum
Outline of Final Research Achievements

Skin cancer develops as a result of the accumulation of mutations in stem cells of the tissue. Exposure to ultraviolet light leads to accumulation of mutations in the skin; however, the understanding of how skin malignancy progresses is poor and imposes a bottleneck to designing efficient treatments to overcome the disease.
In order to identify novel oncogenes and tumor suppressor genes as targets of UV-induced mutagenesis, I took advantage of iPSCs and gene editing technologies. Xeroderma pigmentosum (XP) patient-derived iPSCs were obtained. The XPA mutation was repaired in order to generate isogenic control cells. Then, I engineered genetically the aforementioned cells to be able to delete tumor suppressor genes using CRISPR/Cas9 nuclease. Application of UV-induced mutagenesis in conjunction with CRISPR/Cas9 in iPSC differentiated skin keratinocytes may allow to induce cell transformation and identify cancer causative mutations using massive parallel sequencing.

Academic Significance and Societal Importance of the Research Achievements

The aim of this work is to generate a model of skin cancer in vitro. The model permits to emulate the acquisition of cancer driver mutations and may allow design custom-made individual patient therapies, compound screening and drug development thus reducing the use of animals for experimentation.

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (11 results)

All 2020 2019 2018

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (9 results) (of which Int'l Joint Research: 2 results,  Invited: 6 results) Book (1 results)

  • [Journal Article] OVOL1 Influences the Determination and Expansion of iPSC Reprogramming Intermediates2019

    • Author(s)
      Kagawa H, Shimamoto R, Kim S-I, Oceguera-Yanez F,Yamamoto T,Schroeder T, and Woltjen K
    • Journal Title

      Stem Cell Reports

      Volume: 12 Issue: 2 Pages: 1-14

    • DOI

      10.1016/j.stemcr.2018.12.008

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Applications of genetically engineered human iPSCs to understand skin cancer development and pathology.2020

    • Author(s)
      Fabian Oceguera-Yanez
    • Organizer
      Keystone Symposium on Tissue Organoids
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Applications of genetically engineered human iPSCs to understand skin cancer development and pathology. Poster presentation2020

    • Author(s)
      Fabian Oceguera-Yanez, Thomas Luc Maurissen, Michiko Nakamura, Tomoko Matsumoto and Knut Woltjen
    • Organizer
      Keystone Symposia on Tissue Organoids
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development and application of genome editing and iPSC differentiation to model skin damage and disease2019

    • Author(s)
      Fabian Oceguera-Yanez
    • Organizer
      第4回 京都皮膚基礎研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Bringing iPSC Technology to the Bedside2019

    • Author(s)
      Fabian Oceguera-Yanez
    • Organizer
      Dior Skincare Summit, Tokyo
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Introduction to CiRA and iPSC Research2019

    • Author(s)
      Fabian Oceguera-Yanez
    • Organizer
      Capture Totale Japan Event, Tokyo
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Application of genetically engineered iPSCs to dissect skin cancer pathology. Poster presentation2019

    • Author(s)
      Fabian Oceguera-Yanez, Thomas Luc Maurissen, Michiko Nakamura, Tomoko Matsumoto and Knut Woltjen
    • Organizer
      MBSJ 日本分子生物学会 2019
    • Related Report
      2019 Annual Research Report
  • [Presentation] Applications of genetically engineered human iPSCs to understand skin cancer development and pathology. Poster presentation2019

    • Author(s)
      Fabian Oceguera-Yanez, Thomas Luc Maurissen, Michiko Nakamura, Tomoko Matsumoto and Knut Woltjen
    • Organizer
      CiRA International Symposium 2019
    • Related Report
      2019 Annual Research Report
  • [Presentation] Development and application of genome editing and iPSC differentiation to model skin damage and disease2019

    • Author(s)
      Fabian Oceguera-Yanez
    • Organizer
      第4回 京都皮膚基礎研究会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Modeling skin development and genodermatoses using genetically engineered iPSCs2018

    • Author(s)
      Fabian Oceguera-Yanez
    • Organizer
      Presentation at Institute of Cellular Physiology, Neurosciences, National University of Mexico
    • Related Report
      2018 Research-status Report
    • Invited
  • [Book] ヒトiPS細胞 のAAVS1遺伝子座への遺伝子組込み。2019

    • Author(s)
      Lee, S., 香川晴信, 松本智子, Oceguera-Yanez, F., and Woltjen, K.
    • Total Pages
      386
    • Publisher
      実験医学
    • ISBN
      9784758122443
    • Related Report
      2019 Annual Research Report

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Published: 2017-04-28   Modified: 2021-02-19  

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