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Direct observation of multiple reaction pathway and transition state ensembles in molecular systems having large degree of freedom by single molecule measurements

Research Project

Project/Area Number 17KT0009
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeMulti-year Fund
Section特設分野
Research Field Transition State Control
Research InstitutionOsaka City University

Principal Investigator

Sakota Kenji  大阪市立大学, 大学院理学研究科, 准教授 (80346767)

Project Period (FY) 2017-07-18 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥18,590,000 (Direct Cost: ¥14,300,000、Indirect Cost: ¥4,290,000)
Fiscal Year 2019: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2018: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2017: ¥9,230,000 (Direct Cost: ¥7,100,000、Indirect Cost: ¥2,130,000)
Keywords微小液滴 / タンパク質 / イオントラップ / 顕微分光 / 油中水滴 / 励起光共鳴 / Mie理論 / 一分子測定 / 大自由度分子系 / 一分子計測
Outline of Final Research Achievements

The following studies were conducted to measure fluorescence from proteins dissolved in microdroplets with high sensitivity. (1) The electrode for droplet trapping used in the previous studies cannot increase the solid angle of light collection, which makes it difficult to measure fluorescence with high sensitivity. The fluorescence emitted from microdroplets was measured 80 times more sensitively by using the end-cap trap we have developed in this study. (2) We observed the fluorescence enhancement effect caused by the confinement of the excitation light irradiated on the droplet inside the droplet. The sensitivity was improved by about three orders of magnitude compared with the conventional method, together with the improvement of the sensitivity of fluorescence detection by the improvement of the ion trap.

Academic Significance and Societal Importance of the Research Achievements

蛍光検出は,測定対象を「その場」で「非破壊的に」観測できる有力な手段である.本研究では,光共振器として振る舞う単一微小液滴を上手く利用することにより,蛍光検出感度の更なる向上を達成した.この方法をタンパク質のような大自由度分子系に適用することによって,これまで感度不足のために計測することができなかった分子系の振る舞いを明らかにすることが可能となり,大自由度分子系が示す複雑なダイナミクスを分子レベルで理解するための基礎データを取得することが可能となる.

Report

(6 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Research-status Report
  • 2019 Research-status Report
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (28 results)

All 2021 2020 2019 2018 2017

All Journal Article (5 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 5 results,  Open Access: 1 results) Presentation (23 results) (of which Int'l Joint Research: 7 results,  Invited: 6 results)

  • [Journal Article] Cooperative dissociation of J-aggregates into monomers in the 2- isobutoxyethanol/water binary solvent with the lower critical solution temperature2020

    • Author(s)
      Mio Harada, Shunsuke Yamamoto, Tomoyuki Yatsuhashi, Kenji Sakota
    • Journal Title

      Chemical Physics

      Volume: 536 Pages: 110817-110817

    • DOI

      10.1016/j.chemphys.2020.110817

    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Journal Article] An electron-capture efficiency in femtosecond filamentation2020

    • Author(s)
      Nakashima Nobuaki、Yatsuhashi Tomoyuki、Sakota Kenji、Iwakura Izumi、Hashimoto Sena、Yokoyama Keiichi、Matsuda Shohei
    • Journal Title

      Chemical Physics Letters

      Volume: 752 Pages: 137570

    • DOI

      10.1016/j.cplett.2020.137570

    • URL

      https://ocu-omu.repo.nii.ac.jp/records/2019723

    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Journal Article] Synthesis of Bare Iron Nanoparticles from Ferrocene Hexane Solution by Femtosecond Laser Pulses2018

    • Author(s)
      T. Okamoto, T. Nakamura, R. Kihara, T. Asahi, K. Sakota, T. Yatsuhashi
    • Journal Title

      ChemPhysChem

      Volume: 19 Issue: 19 Pages: 2480-2485

    • DOI

      10.1002/cphc.201800436

    • NAID

      120006734420

    • URL

      https://ocu-omu.repo.nii.ac.jp/records/2019763

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Real-time observation of the photoionization-induced water rearrangement dynamics in the 5-hydroxyindole-water cluster by time-resolved IR spectroscopy2018

    • Author(s)
      Mitsuhiko Miyazaki, Ayumi Naito, Takamasa Ikeda, Johanna Klyne, Kenji Sakota, Hiroshi Sekiya, Otto Dopfer, Masaaki Fujii
    • Journal Title

      Phys. Chem. Chem. Phys.

      Volume: 20 Issue: 5 Pages: 3079-3091

    • DOI

      10.1039/c7cp06127g

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Elevation of the Energy Threshold for Isomerization of 5-Hydroxyindole-(tert-butyl alcohol)1 Cluster Cations2017

    • Author(s)
      Takamasa Ikeda, Kenji Sakota, Hiroshi Sekiya
    • Journal Title

      J. Phys. Chem. A

      Volume: 121 Issue: 31 Pages: 5809-5816

    • DOI

      10.1021/acs.jpca.7b05434

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Presentation] 単一微小液滴に溶存した色素分子の分子配向と空間分布の濃度依存性2021

    • Author(s)
      亀井航汰,佐野元哉,八ッ橋知幸,迫田憲治
    • Organizer
      第15回分子科学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 蛍光イメージングを用いた微小空間におけるタンパク質の安定性と空間分布の評価2021

    • Author(s)
      臼山拓実,八ッ橋知幸,迫田憲治
    • Organizer
      第15回分子科学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 微小液滴内における分子配向の観測および断熱チャンバーを用いた微小液滴の蒸発速度の制御2021

    • Author(s)
      宮下凌,野口昌起,亀井航汰,八ッ橋知幸,迫田憲治
    • Organizer
      第15回分子科学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 溶液中における超分子J会合体の蛍光イメージングと配列度の評価2021

    • Author(s)
      原田美緒,山本駿介,八ッ橋知幸,迫田憲治
    • Organizer
      日本化学会第101春季年会
    • Related Report
      2020 Research-status Report
  • [Presentation] 光閉じ込め効果を用いた単一微小液滴における分子配向効果の観測2021

    • Author(s)
      亀井航汰,佐野元哉,八ッ橋知幸,迫田憲治
    • Organizer
      日本化学会第101春季年会
    • Related Report
      2020 Research-status Report
  • [Presentation] 超分子J会合体の溶液内蛍光イメージング2020

    • Author(s)
      原田美緒,山本駿介,八ッ橋知幸,迫田憲治
    • Organizer
      分子科学会オンライン討論会
    • Related Report
      2020 Research-status Report
  • [Presentation] リポソームに内包されたタンパク質の構造安定性および空間分布に関する蛍光イメージング評価2020

    • Author(s)
      臼山拓実,原田美緒,三宅宏典,中島洋,八ッ橋知幸,迫田憲治
    • Organizer
      分子科学会オンライン討論会
    • Related Report
      2020 Research-status Report
  • [Presentation] 単一微小液滴で生じる分子配向に起因する蛍光増強の観測2020

    • Author(s)
      亀井航汰,佐野元哉,八ッ橋知幸,迫田憲治
    • Organizer
      分子科学会オンライン討論会
    • Related Report
      2020 Research-status Report
  • [Presentation] Fluorescence enhancement caused by the excitation light confinement in a single microdroplet2019

    • Author(s)
      Kenji Sakota
    • Organizer
      Manchester International Symposium: Highly-excited States and Non-covalent Interactions
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] The cavity mode dependent confinement of excitation light in a single levitated microdroplet2019

    • Author(s)
      Kenji Sakota
    • Organizer
      The 23th East Asian Workshop on Chemical Dynamics
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] A single droplet microscopy for highly sensitive fluorescence detection2019

    • Author(s)
      Kenji Sakota
    • Organizer
      WRHI International Workshop
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Microscopy of a single levitated microdroplet for biomolecular applications2019

    • Author(s)
      Kenji Sakota
    • Organizer
      13th International Symposium on Nanomedicine (ISNM2019)
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 単一微小液滴で生じる励起光の閉じ込めに起因した蛍光増強とその液滴径依存性2019

    • Author(s)
      佐野元哉,八ッ橋知幸,迫田憲治
    • Organizer
      第13回分子科学討論会
    • Related Report
      2019 Research-status Report
  • [Presentation] 平行平板型イオントラップとエンドキャップトラップの性能比較2019

    • Author(s)
      野口昌起,佐野元哉,八ッ橋知幸,迫田憲治
    • Organizer
      第13回分子科学討論会
    • Related Report
      2019 Research-status Report
  • [Presentation] Performance comparison with a parallel plate iontrap and an endcap iontrap2019

    • Author(s)
      Masaki Noguchi, Motoya Sano, Tomoyuki Yatsuhashi, Kenji Sakota
    • Organizer
      International Workshop on Quantum Sensing & Biophotonics 2019
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] 空間捕捉した単一微小液滴が示す励起光共鳴に起因した蛍光増強効果の液滴サイズ依存性2019

    • Author(s)
      佐野元哉,八ッ橋知幸,迫田憲治
    • Organizer
      第99回日本化学会春季年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Development of a small endcap trap for laser microscopy in a single levitated microdroplet2018

    • Author(s)
      Motoya Sano, Tomoyuki Yatsuhashi, Kenji Sakota
    • Organizer
      34th Symposium on Chemical Kinetics and Dynamics
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] 小型エンドキャプトラップの製作と微小液滴が示す励起光共鳴に起因した蛍光増強効果の観測2018

    • Author(s)
      佐野元哉,八ッ橋知幸,迫田憲治
    • Organizer
      第12回分子科学討論会
    • Related Report
      2018 Research-status Report
  • [Presentation] Laser chemistry for Eu recovery2018

    • Author(s)
      Nobuaki Nakashima, Tomoyuki Yatsuhashi, Kenji Sakota, Izumi Iwakura, Keiichi Yokoyama
    • Organizer
      日本化学会第98春季年会
    • Related Report
      2017 Research-status Report
  • [Presentation] Laser spectroscopy of a single levitated microdroplet ~Lasing and resonance energy transfer~2017

    • Author(s)
      Kenji Sakota
    • Organizer
      International Symposium on "Diversity of Chemical Reaction Dynamics"
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 単一微小液滴の顕微分光とバルク溶液中におけるキラルJ会合体の研究2017

    • Author(s)
      迫田憲治
    • Organizer
      第40回溶液化学シンポジウム
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 空間捕捉した単一微小液滴のレーザー顕微分光2017

    • Author(s)
      安冨翔太,佐野元哉,山本駿介,大谷拓也,関谷博,八ツ橋知幸,迫田憲治
    • Organizer
      第11回分子科学討論会
    • Related Report
      2017 Research-status Report
  • [Presentation] 両親媒性シアニン色素のキラルJ会合体形成における混合溶媒の組成比依存性2017

    • Author(s)
      大谷拓也,三宅弘之,八ツ橋知幸,迫田憲治
    • Organizer
      第40回溶液化学シンポジウム
    • Related Report
      2017 Research-status Report

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Published: 2017-07-21   Modified: 2023-01-30  

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