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A Novel Genomic Approch for the Understanding of the Structure and Function of Chromosomes

Research Project

Project/Area Number 18101007
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field 基礎ゲノム科学
Research InstitutionTokyo Institute of Technology

Principal Investigator

SHIRAHIGE Katsuhiko  Tokyo Institute of Technology, 分子細胞生物学研究所, 教授 (90273854)

Co-Investigator(Kenkyū-buntansha) HIROTA Toru  財団法人癌研究会, 癌研究所・実験病理部, 部長 (50421368)
SUTANI Takashi  東京大学, 分子細胞生物学研究所, 助教 (30401524)
ITOH Takehiko  東京工業大学, 大学院・生命理工学研究科, 教授 (90501106)
Project Period (FY) 2006 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥103,480,000 (Direct Cost: ¥79,600,000、Indirect Cost: ¥23,880,000)
Fiscal Year 2010: ¥18,070,000 (Direct Cost: ¥13,900,000、Indirect Cost: ¥4,170,000)
Fiscal Year 2009: ¥19,240,000 (Direct Cost: ¥14,800,000、Indirect Cost: ¥4,440,000)
Fiscal Year 2008: ¥21,320,000 (Direct Cost: ¥16,400,000、Indirect Cost: ¥4,920,000)
Fiscal Year 2007: ¥26,650,000 (Direct Cost: ¥20,500,000、Indirect Cost: ¥6,150,000)
Fiscal Year 2006: ¥18,200,000 (Direct Cost: ¥14,000,000、Indirect Cost: ¥4,200,000)
Keywords染色体構築 / ChIP-chip / ChIP-seq / コヒーシン / 染色体モデル / 転写制御 / コヒーシン病 / アセチル化修飾 / 脱アセチル化 / 染色体構造 / DNAチップ / 染色体分配 / 染色体凝縮 / 染色体複製
Research Abstract

We have built up the system for the efficient analysis of chromosome structure of yeast species. Based on this system, we have identified many cross talks between chromosome functions and newly developed the new system to analyze chromosome structure of higher eukaryotes. The key method is to use in vitro transcription instead of PCR for the amplification of genomic fragment from higher eukaryotes that contain many and various classes of repetitive sequences, to avoid biased amplification of repeat. Using the system we unexpectedly found that cohesion, the protein complex essential for holding sister chromatids together until the onset of M-phase, co-localizes with CTCF, the protein essential for transcriptional insulation. Our data suggest that the cohesion complex itself is required for transcriptional insulation and CTCF is required for proper localization of cohesion complexes on chromosome.

Report

(6 results)
  • 2010 Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report   Self-evaluation Report ( PDF )
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • Research Products

    (66 results)

All 2009 2008 2007 2006 2005 Other

All Journal Article (54 results) (of which Peer Reviewed: 48 results) Presentation (1 results) Book (1 results) Remarks (10 results)

  • [Journal Article] Yeast Wpl1 (Rad61)-Pds5 Complex Counteracts Sister Chromatid Cohesion-Establishing Reaction.2009

    • Author(s)
      T.Sutani, T.Kawaguchi, R.Kanno, T.Itoh, K.Shirahige
    • Journal Title

      Curr.Biol. 19

      Pages: 492-497

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Transcriptional dysregulation in NIPBL and cohesin mutant human cells.2009

    • Author(s)
      J.Liu, Z.Zhang, M.Bando, T.Itoh, M.A.Deardorff, D.Clark, M.Kaur, S.Tandy, T.Kondoh, E.Rappaport, N.B.Spinner, H.Vega, L.G.Jackson, K.Shirahige, I.D.Krantz.
    • Journal Title

      PLoS Biol. 7

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome-Organizing Factors Top2 and Hmo1 Prevent Chromosome Fragility at Sites of S phase Transcription2009

    • Author(s)
      R.Bermejo, T.Capra, V.Gonzales-Huici, D.Fachinetti, A.Cocito, G.Natoli, Y.Katou, H.Mori, K.Kurokawa, K.Shirahige, M.Foiani
    • Journal Title

      Cell 138

      Pages: 870-884

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Krantz Transcriptional Dysregulation in NIPBL and Cohesin Mutant Human Cells2009

    • Author(s)
      Liu, Z., Zhang, M., Bando, T., Itoh, M.A., Deardorff, D., Clark, M., Kaur, S., Tandy, T., Kondoh, E., Rappaport, N.B., Spinner, H., Vega, L.G., Jackson, K., Shirahige, I.D.
    • Journal Title

      PLoS Biology (in press)

    • Related Report
      2008 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Budding Yeast Wpl1(Rad61)-Pds5 Complex Counteracts Sister Chromatid Cohesion- Establishing Reaction2009

    • Author(s)
      T. Sutani, T. Kawaguchi, R. Kanno, T. Itoh, K. Shirahige
    • Journal Title

      Curr. Biol 19

      Pages: 492-497

    • Related Report
      2008 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Transcriptional Dysregulation in NIPBL and Cohesin Mutant Human Cells.2009

    • Author(s)
      J. Liu, Z. Zhang, M. Bando, T. Itoh, M. A. Deardorff, D. Clark, M. Kaur, S. Tandy, T. Kondoh, E. Rappaport, N. B. Spinner, H. Vega, L. G. Jackson, K. Shirahige, I. D. Krantz
    • Journal Title

      PLoS Biology (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Architectural roles of multiple chromatin insulators at the humanapolipoprotein gene cluster.2009

    • Author(s)
      T. Mishiro, K. Ishihara, S. Hino, S. Tsutsumi, H. Aburatani, K. Shirahige, Y. Kinoshita, M. Nakao
    • Journal Title

      EMBOJ. (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Budding Yeast Wpll(Rad61)-Pds5 Complex Counteracts Sister Chromatid Cohesion-Establishing Reaction.2009

    • Author(s)
      T. Sutani, T. Kawaguchi, R. Kanno, T. Itoh, K. Shirahige
    • Journal Title

      Curr. Biol 19

      Pages: 492-497

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cohesin mediates transcriptional insulation by CCCTC-binding factor.2008

    • Author(s)
      K.S.Wendt, K.Yoshida, T.Itoh, M.Bando, B.Koch, E.Schirghuber, S.Tsutsumi, G.Nagae, K.Ishihara, T.Mishiro, K.Yahata, F.Imamoto, H.Aburatani, M.Nakao, N.Imamoto, K.Maeshima, K.Shirahige, J.-M.Peters
    • Journal Title

      Nature (article) 451

      Pages: 796-801

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mrcl and DNA polymerase function together in linking DNA replication and the S phase checkpoint2008

    • Author(s)
      H.Lou, M.Komata, Y.Katou, Z.Guan, C.C.Reis, M.Budd, K.Shirahige, J.L.Campbelll
    • Journal Title

      Mol.Cell 32

      Pages: 106-117

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification of cis-acting sites for condens in loading onto budding yeast chromosomes.2008

    • Author(s)
      C.D' Ambrosio, C.K.Schmidt, Y.Katou, G.Kelly, T.Itoh, K.Shirahige, F.Uhlmann
    • Journal Title

      Genes Dev. 22

      Pages: 2215-2227

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Balance between distinct HP1 family proteins controls heterochromatin assembly in fission yeast.2008

    • Author(s)
      M.Sadaie, R.Kawaguchi, Y.Ohtani, F.Arisaka, K.Tanaka, K.Shirahige, J.Nakayama
    • Journal Title

      Mol Cell Biol. 28

      Pages: 6973-6988

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Rad51 suppresses gross chromosomal rearrangement at centromere in Schizosaccharomyces pombe.2008

    • Author(s)
      K.Nakamura, A.Okamoto, Y.Katou, C.Yadani, T.Shitanda, C.Kaweeteerawat, T.S.Takahashi, T.Itoh, K.Shirahige, H.Masukata, T.Nakagawa
    • Journal Title

      EMBO J. 27

      Pages: 3036-3046

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Nutrient-regulated antisense and intragenic RNAs modulate a signal transduction pathway in yeast.2008

    • Author(s)
      M.Nishizawa, T.Komai, Y.Katou, K.Shirahige, T.Itoh, A.Toh-E
    • Journal Title

      PLoS Biol. 6

      Pages: 2817-2830

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cohesin mediates transcriptional insulation by CCCTC-binding factor2008

    • Author(s)
      K.S. Wendt*, K. Yoshida*, T. Itoh*, M. Bando, B. Koch, E. Schirghuber, S. Tsutsumi, G. Nagae, K. Ishihara, T. Mishiro, K. Yahata, F. Imamoto, H. Aburatani, M. Nakao, N. Imamoto, K. Maeshima, K. Shirahige+, J.M. Peters
    • Journal Title

      Nature 451

      Pages: 796-801

    • Related Report
      2008 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Rad5 1 suppresses gross chromosomal rearrangement at centromere in Schizosaccharomyces pombe.2008

    • Author(s)
      K. Nakamura, A. Okamoto, Y. Katou, C. Yadani, T. Shitanda, C. Kaweeteerawat, T. S. Takahashi, T. Itoh, K, Shirahige. H. Masukata, T. Nakagawa
    • Journal Title

      EMBOJ. 27

      Pages: 3036-3046

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of cis-actmg sites for condensin loading onto budding yeast chromosomes2008

    • Author(s)
      C. D'Ambrosio, C. K. Schmidt, Y. Katou, G. Kelly, T. Itoh, K. Shirahige., F. Uhlmarui
    • Journal Title

      Genes Dev. 22

      Pages: 2215-2227

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mrc1 and DNA polymerase ε function together in linking DNA replication and the S phase checkpoint2008

    • Author(s)
      H. Lou, M. Komata, Y. Katou, Z. Guan, C. C. Reis, M. Budd, K. Shirahige. J. L. Campbelll
    • Journal Title

      Mol. Cell 32

      Pages: 106-117

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cohesin mediates transcriptional insulation by CCCTC-binding factor.2008

    • Author(s)
      Wendt KS#, Yoshida K#, Itoh T#, Bando M, Koch B, Schirghuber E, Tsutsumi S, Nagae G, Ishihara K, Mishiro T, Yahata K, Imamoto F, Aburatani H, Nakao M, Imamoto N, Maeshima K, Shirahige K*, Peters JM*. (#Equally Contributed Author, *Shared Corresponding Author)
    • Journal Title

      Nature (Article) 451

      Pages: 796-801

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation.2007

    • Author(s)
      R.Bermejo, Y.Doksani, T.Capra, Y.M.Katou, H.Tanaka, K.Shirahige, M.Foiani
    • Journal Title

      Genes Dev. 21

      Pages: 1921-1936

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Assembly of regulatory factors on rRNA and ribosomal protein genes in Saccharomyces cerevisiae.2007

    • Author(s)
      K.Kasahara, K.Ohtsuki, S.Ki, K.Aoyama, H.Takahashi, T.Kobayashi, K.Shirahige, T.Kokubo
    • Journal Title

      Mol Cell Biol. 27

      Pages: 6686-6705

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] The Kinetochore Proteins Pcs1 and Mde4 and Heterochromatin Are Required to Prevent Merotelic Orientation.2007

    • Author(s)
      J.Gregan, C.G.Riedel, A.L.Pidoux, Y.Katou, C.Rumpf, A.Schleiffer, S.E.Kearsey, K.Shirahige, R.C.Allshire, K.Nasmyth
    • Journal Title

      Curr Biol 17

      Pages: 1190-1200

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Postreplicative formation of cohesion is required for repair and induced by a single DNA break.2007

    • Author(s)
      L.Strom L, C.Karlsson, H.B.Lindroos, S.Wedahl, Y.Katou, K.Shirahige, C.Sjogren
    • Journal Title

      Science. 317

      Pages: 242-245

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Ohta Mrell mediates gene regulation in yeast spore development.2007

    • Author(s)
      K.Kugou, H.Sasanuma, K.Matsumoto, K.Shirahige, K.
    • Journal Title

      Genes Genet Syst. 82

      Pages: 21-33

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Meiotic recombination-related DNA synthesis and its implications for cross-over and non-cross-over recombinant formation.2007

    • Author(s)
      M.Terasawa, H.Ogawa, Y.Tsukamoto, M.Shinohara, K.Shirahige, N.Kleckner, T.Ogawa
    • Journal Title

      Proc Natl Acad Sci U S A. 104

      Pages: 5965-5970

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genome-wide localization of pre-RC sites and identification of replication origins in fission yeast.2007

    • Author(s)
      M.Hayashi, Y.Katou, T.Itoh, M.Tazumi, Y.Yamada, T.Takahashi, T.Nakagawa, K.Shirahige, H.Masukata
    • Journal Title

      EMBO J. 26

      Pages: 1327-1339

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification of novel androgen response genes in prostate cancer cells by coupling chromatin immunoprecipitation and genomic microarray analysis.2007

    • Author(s)
      K.Takayama, K.Kaneshiro, S.Tsutsumi, K.Horie-Inoue, K.Ikeda, T.Urano, N.Ijichi, Y.Ouchi, K.Shirahige, H.Aburatani, S.Inoue
    • Journal Title

      Oncogene. 26

      Pages: 4453-4463

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Perturbation of the activity of replication origin by meiosis specific transcription2007

    • Author(s)
      S.Mori, K.Shirahige
    • Journal Title

      J.Biol.Chem. 282

      Pages: 4447-4452

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Abnormality in initiation program of DNA replication is monitored by the highly repetitive rDNA array on chromosome XII in budding yeast2007

    • Author(s)
      S.Ide, K.Watanabe, H.Watanabe, K.Shirahige, T.Kobayashi, H.Maki
    • Journal Title

      Mol.Cell.Biol. 27

      Pages: 568-578

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] An integrated map of p53-binding sites and histone modification in the human2007

    • Author(s)
      K.Kaneshiro, S.Tsutsumi, S.Tsuji, K.Shirahige, H.Aburatani
    • Journal Title

      ENCODE regions Genomics 89

      Pages: 178-188

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Displacement and re-accumulation of centromeric cohesin during transient pre-anaphase centromere splitting.2007

    • Author(s)
      M.T.Ocampo-Hafalla, Y.Katou, K.Shirahige, F.Uhlmann
    • Journal Title

      Chromosoma. 116

      Pages: 531-544

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Topl-and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation.2007

    • Author(s)
      Bermejo R, Doksani Y, Capra T, Katou YM, Tanaka H, Shirahige K*, Foiani M*. (Shared Corresponding Author)
    • Journal Title

      Genes Dev. 21

      Pages: 1921-1936

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Assembly of regulatory factors on rRNA and ribosomal protein genes in Saccharomyces cerevisiae.2007

    • Author(s)
      Kasahara K, Ohtsuki K, Ki S, Aoyama K, Takahashi H, Kobayashi T, Shirahige K, Kokubo T.
    • Journal Title

      Mol Cell Biol. 27

      Pages: 6686-6705

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The kinetochore proteins Pcsl and Mde4 and heterochromatin are required to prevent merotelic orientation.2007

    • Author(s)
      Gregan J, Riedel CG, Pidoux AL, Katou Y, Rumpf C, Schleiffer A, Kearsey SE, Shirahige K, Allshire RC, Nasmyth K.
    • Journal Title

      Curr Biol. 17

      Pages: 1190-1200

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Terasawa M, Ogawa H, Tsukamoto Y, Shinohara M, Shirahige K, Kleckner N, Ogawa T.2007

    • Author(s)
      Terasawa M, Ogawa H, Tsukamoto Y, Shinohara M, Shirahige K, Kleckner N, Ogawa T.
    • Journal Title

      Proc Natl Acad Sci USA 104

      Pages: 5965-5970

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome-wide localization of pre-RC sites and identification of replication orogines in fission yeast.2007

    • Author(s)
      M.Hayashi, Y.Katou, T.Itoh, M.tazumi, Y.Yamada, T.takahashi, T.Nakagawa, K.Shirahige, H.Masukata
    • Journal Title

      EMBO J. 26

      Pages: 1327-1339

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Mrell mediates gene regulation in yeast spore development.2007

    • Author(s)
      K.Kugou, H.Sasanuma, K.Matsumoto, K.Shirahige, K.Ohta
    • Journal Title

      Genes Genet Syst. 82

      Pages: 21-33

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Genomic Approach for the Understanding of Dynamic Aspect of Chromosome Behavior.2006

    • Author(s)
      Y.Katou, K.Kaneshiro, H.Aburatani, K.Shirahige.
    • Journal Title

      METHODS IN ENZYMOLOGY "DNA Repair"(edited by J.Campbell) vol.409, chapter 23

      Pages: 389-410

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Protein Phosphatase 2A protects centromeric sister chromatid cohesion.2006

    • Author(s)
      C.G.Riedel, V.L.Katis, Y.Katou, S.Mori, T.Itoh, W.Helmhart, M.Galova, M.Petronczki, J.Gregan, B.Cetin, I.Mudrak, E.Ogris, K.Mechtler, L.Pelletier, F.Buchholz, K.Shirahige, K.Nasmyth.
    • Journal Title

      Nature (Article) 441

      Pages: 53-61

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Different requirements for the association of ATR-ATRIP and 9-1-1 to the stalled replication forks.2006

    • Author(s)
      Y.Kanoh, K.Tamai, K.Shirahige.
    • Journal Title

      Gene. 377

      Pages: 88-95

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Screening for candidate genes involved in tolerance to organic solvents in yeast.2006

    • Author(s)
      K.Matsui, T.Hirayama, K.Kuroda, K.Shirahige, T.Ashikari, M.Ueda.
    • Journal Title

      Appl Microbiol Biotechnol. 71

      Pages: 75-79

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Chromosomal Association of the Smc5/6 Complex Reveals that It Functions in Differently Regulated Pathways.2006

    • Author(s)
      H.Betts Lindroos, L.Strom, T.Itoh, Y.Katou, K.Shirahige, C.Sjogren
    • Journal Title

      Mol Cell. 22

      Pages: 755-767

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genomic Approach for the Understanding of Dynamic Aspect of Chromosome Behavior.2006

    • Author(s)
      Y.Katou, K.Kaneshiro, H.Aburatani, K.Shirahige.
    • Journal Title

      Methods in Enzymology, Elsevier Life Sciences (CA) "DNA Repair"(edited by J.Campbell) vol.409,chapter 23

      Pages: 389-410

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Evidence that Loading of Cohesin Onto Chromosomes Involves Opening of Its SMC Hinge2006

    • Author(s)
      S.Gruber, P.Arumugam, Y.Katou, D.Kuglitsch, W.Helmhart, K.Shirahige, K.Nasmyth
    • Journal Title

      Cell 127

      Pages: 523-537

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Monopolar attachment of sister kinetochores at meiosis I requires casein kinase 1.2006

    • Author(s)
      M.Petronczki, J.Matos, S.Mori, J.Gregan, A.Bogdanova, M.Schwickart, K.Mechtler, K.Shirahige, W.Zachariae, K.Nasmyth
    • Journal Title

      Cell 126

      Pages: 1049-1064

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Establishment of Sister Chromatid Cohesion at the S.cerevisiae Replication Fork.2006

    • Author(s)
      A.Lengronne, J.McIntyre, Y.Katou, Y.Kanoh, K.P.Hopfner, K.Shirahige, F.Uhlmann
    • Journal Title

      Mol Cell. 23

      Pages: 787-799

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Meiotic cohesins modulate chromosome compaction during meiotic prophase in fission yeast.2006

    • Author(s)
      D.Q.Ding, N.Sakurai, Y.Katou, T.Itoh, K.Shirahige, T.Haraguchi, Y.Hiraoka.
    • Journal Title

      J Cell Biol. 174

      Pages: 499-508

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Protein Phosphatase 2A protects centromeric sister chromatid cohesion2006

    • Author(s)
      C.G.Riesel, V.L.Katis, Y.Katou, S.Mori, T.Itoh, W.Helmhart, M.Galova, M.Petronczki, J.Gregan, B.Cetin, I.Mudrak, E.Ogris, K.Mechtler, L.Pelletier, F.Buchholz, K.Shirahige, K.Nasmyth
    • Journal Title

      Nature (Article) 441

      Pages: 53-61

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Chromosomal Association of the Smc5/6 Complex Reveals that It Functions in Differently Regulated Pathways.2006

    • Author(s)
      H.Betts Lindroos, L.Strom, T.Itoh, Y.Katou, K.Shirahige^*, C.Sjogren^* (*equally contributed author).
    • Journal Title

      Mol Cell 22

      Pages: 755-767

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Meiotic cohesins modulate chromosome compaction during meiotic prophase in fission yeart.2006

    • Author(s)
      D.Q.Ding, N.Sakurai, Y.Katou, T.Itoh, K.Shirahige, T.Haraguchi, Y.Hiraoka.
    • Journal Title

      J Cell Biol. 174

      Pages: 499-508

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Monopolar attachment of sister kinetochores at meiosis I requires casein kinase I.2006

    • Author(s)
      M.Petronczki, J.Matos., S.Mori, J.Greham, A.Bogdanova, M.Schwickart, K.Mechtler, K.Shirahige, W.Zachariae, K.Nasmyth
    • Journal Title

      Cell 126

      Pages: 1049-1064

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Glucose-dependent cell size is regulated by a G protein-coupled receptor system in yeast Saccharomyces cerevisiae.2005

    • Author(s)
      H.Tamaki, C.W.Yun, T.Mizutani, T.Tsuzuki, Y.Takagi, M.Shinozaki, Y.Kodama, K.Shirahige, H.Kumagai.
    • Journal Title

      Genes Cells. 10

      Pages: 193-206

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A checkpoint control linking meiotic S phase and recombination initiation in fission yeast2005

    • Author(s)
      Y.Tonami, H.Murakami, K.Shirahige, M.Nakanishi.
    • Journal Title

      .Proc.Natl.Acad.Sci.U.S.A. 102

      Pages: 5797-801

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification and characterization of rns4/vps32 mutation in the RNase T1 expression-sensitive strain of Saccharomyces cerevisiae : Evidence for altered ambient response resulting in transportation of the secretory protein to vacuoles.2005

    • Author(s)
      K.Unno, P.R.Juvvadi, H.Nakajima, K.Shirahige, K.Kitamoto.
    • Journal Title

      FEMS Yeast Res. 5

      Pages: 801-812

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Presentation] Genomic Approach Reveals a New Aspect of Chromosome Dynamics2009

    • Author(s)
      白髭克彦
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-09
    • Related Report
      2009 Annual Research Report
  • [Book] Methods in Enzymology, Elsevier Life Sciences (CA) vol. 409, chapter 23, 389-4102006

    • Author(s)
      Y.Kugou, H.Sasanuma, K.Matsumoto, K.Shirahige, K.Ohta
    • Total Pages
      575
    • Publisher
      Genomic Approach for the Understanding of Dynamic Aspect of Chromosome Behavior.
    • Related Report
      2006 Annual Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.iam.u-tokyo.ac.jp/chromosomeinformatics/index.html

    • Related Report
      2010 Final Research Report
  • [Remarks] 2008年5月Nature Digest誌Vol.05No.5(p.32-33)「遺伝子の転写反応を区切る壁は意外なタンパク質」

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2008年2月14日発刊Nature誌vol.451(p777-778)Frank Uhlmann, NEWS & VIEWS "Cohesin branches out"

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2008年2月7日フジサンケイビジネスアイ新聞「遺伝子「仕切る」タンパク質解明、東工大など」

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2008年2月3日毎日新聞朝刊「ゲノムの遺伝子仕切って制御」

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2008年1月31日産経新聞「ヒトゲノム遺伝子制御の仕組みを解明」

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2008年1月31日日経産業新聞「遺伝子干渉防ぐたんぱく質東工大が発見創薬に期待」

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2008年1月31日日刊工業新聞「DNA束ねるリング状たんぱく質遺伝子区切る"壁"の役割」

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2006年5月4日発刊Nature誌vol.441(p35-37)Paul Megee, NEWS & VIEWS "Chromosome guardians on duty"

    • Related Report
      2008 Self-evaluation Report
  • [Remarks] 2007年7月16日日本経済新聞朝刊19面「DNA修復するたんぱく質発見東工大、がん化の謎さぐる」

    • Related Report
      2008 Self-evaluation Report

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Published: 2006-04-01   Modified: 2016-04-21  

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