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Analysis of counting and enumeration problems pertaining to physically realistic biological systems

Research Project

Project/Area Number 18F18117
Research Category

Grant-in-Aid for JSPS Fellows

Allocation TypeSingle-year Grants
Section外国
Research Field Life / Health / Medical informatics
Research InstitutionThe University of Tokyo

Principal Investigator

陶山 明  東京大学, 大学院総合文化研究科, 教授 (90163063)

Co-Investigator(Kenkyū-buntansha) BARISH ROBERT  東京大学, 大学院総合文化研究科, 外国人特別研究員
Project Period (FY) 2018-04-25 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2019: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2018: ¥600,000 (Direct Cost: ¥600,000)
KeywordsCounting complexity / Graph theory / Combinatorics / Network analysis / Cycles / Paths / 2-Factors
Outline of Annual Research Achievements

We have successfully finished fully characterizing the computational complexity of exactly counting, approximately counting, and enumerating Hamiltonian cycles, Hamiltonian paths, simple cycles, and simple paths for all classes of graphs in the ISGCI database where complexity results are known for the Hamiltonian cycle decision problem (1,246 classes) or the Hamiltonian path decision problem (1,214 classes). We reported a part of the results in the publication, wherein we used novel techniques to prove hardness results on 4-regular 4-vertex-connected planar graphs. To understand the significance of this work, we can observe for this class of graphs that all pairs of vertices are connected by a Hamiltonian path, and moreover, that Hamiltonian cycles can be found in linear time. This places the relevant Hamiltonian cycle counting problem very close the oddly sharp boundary between integer counting problems that are polynomial time tractable and those that are complete for Valiant's class #P. Accordingly, it is reasonable to state that our findings were not necessarily those that were expected by the graph theoretic or theoretical computer science communities.

Concerning results for open conjectures, we report the entirely novel use of parity counting problems to constrain Barnette's famous 1969 conjecture. We also show that three well-known open conjectures of Sheehan, Bondy & Jackson, and Fleischner are true if and only if a reduction exists from #SAT to the Hamiltonian cycle decision problem.

Research Progress Status

令和元年度が最終年度であるため、記入しない。

Strategy for Future Research Activity

令和元年度が最終年度であるため、記入しない。

Report

(2 results)
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • Research Products

    (8 results)

All 2020 2019 2018

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (5 results) (of which Int'l Joint Research: 5 results)

  • [Journal Article] Barnette's conjecture through the lens of the ModkP complexity classes2020

    • Author(s)
      R. D. Barish and A. Suyama
    • Journal Title

      Lecture Notes in Computer Science

      Volume: -

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Randomized reductions and the topology of conjectured classes of uniquely Hamiltonian graphs2020

    • Author(s)
      R. D. Barish and A. Suyama
    • Journal Title

      Journal of Information Processing

      Volume: -

    • NAID

      130007956341

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Counting Hamiltonian cycles on quartic 4-vertex-connected planar graphs2019

    • Author(s)
      R. D. Barish and A. Suyama
    • Journal Title

      Graphs and Combinatorics

      Volume: 36 Issue: 2 Pages: 387-400

    • DOI

      10.1007/s00373-019-02101-7

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Presentation] Counting w-rainbow k-connected colorings of graphs2020

    • Author(s)
      R. D. Barish and A. Suyama
    • Organizer
      4th Bangkok Workshop on Discrete Geometry Dynamics and Statistics
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Randomized reductions and the topology of conjectured classes of uniquely Hamiltonian graphs2019

    • Author(s)
      R. D. Barish and A. Suyama
    • Organizer
      22nd Japan Conference on Discrete and Computational Geometry, Graphs, and Games
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Fully packed loop configurations and the alternating sign matrix theorem2019

    • Author(s)
      Barish, R. D., Suyama A.
    • Organizer
      3rd Bangkok Workshop on Discrete Geometry Dynamics and Statistics
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Barnette's conjecture through the lens of the Mod_k P complexity classes.2018

    • Author(s)
      Barish, R. D., Suyama A.
    • Organizer
      Japan Conference on Discrete and Computational Geometry, Graphs, and Games (JCDCG^3)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Rotationally constrained simple cycles in combinatorial embeddings of graphs2018

    • Author(s)
      Barish, R. D., Suyama A.
    • Organizer
      30th Workshop on Topological Graph Theory
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research

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Published: 2018-05-01   Modified: 2024-03-26  

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