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RNA metabolism during cellular transition

Research Project

Project/Area Number 18K06065
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 43010:Molecular biology-related
Research InstitutionKyoto Prefectural University of Medicine

Principal Investigator

Kami Daisuke  京都府立医科大学, 医学(系)研究科(研究院), 講師 (80415588)

Co-Investigator(Kenkyū-buntansha) 秋光 信佳  東京大学, アイソトープ総合センター, 教授 (40294962)
五條 理志  京都府立医科大学, 医学(系)研究科(研究院), 教授 (90316745)
Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2020: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2019: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
KeywordsRNA metabolism / Cellular transition / FAPS / RNA-seq / LC-MS/MS
Outline of Final Research Achievements

This study clarified the role of RNA metabolism in differentiation and transformation, and demonstrated that the loss of old trait RNA in the P-body, which plays a central role in RNA metabolism, especially in RNA decay, is essential for the differentiation process. Using A549, we analyzed RNA in the P-body during EMT by RNA-seq and analyzed the changes in RNA present. The RNA in the P-body changed drastically during the differentiation process. In a model of adipogenic differentiation from 3T3-L1 to adipocytes, Ddx6, one of the P-body component proteins, plays an important role in adipogenic differentiation, and its KO suppressed the induction of adipogenic differentiation. In addition, comprehensive gene expression analysis by RNA-seq showed that Ddx6-KO maintained the expression of RNA encoding old traits and Dlk1, a suppressor of adipogenic differentiation. We found that degradation of multiple RNAs that maintain progenitor cell traits, but not removal of suppressors, is important.

Academic Significance and Societal Importance of the Research Achievements

本研究は転写されたRNAが細胞内でどのように代謝されているかに着目している。今回、我々はRNA代謝の中心となるP-body内のRNAに着目し、EGFP-DDX6を融合し、P-body内のRNAの変化を解析した。また脂肪分化誘導時におけるP-body形成とDDX6の重要性についても証明しており、細胞内のRNA代謝が重要であることも証明した。以上の結果は、分化制御機構にRNA代謝が能動的に関与する重要な知見であり、発生過程におけるダイナミックな分化制御へのより深い理解に寄与すると共に、癌化の新たな創薬ターゲットとなり得ることを示唆しており、社会的意義は極めて大きいと考える。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (3 results)

All 2021 2019

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (2 results)

  • [Journal Article] RNA decay in processing bodies is indispensable for adipogenesis.2021

    • Author(s)
      Maeda R, Kami D, Shikuma A, Suzuki Y, Taya T, Matoba S, Gojo S.
    • Journal Title

      Cell Death Dis.

      Volume: 12 Issue: 4 Pages: 285-285

    • DOI

      10.1038/s41419-021-03537-7

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] RNA Decay in Processing Bodies is Indispensable for Adipogenesis2021

    • Author(s)
      前田遼太朗 、志熊明 、鈴木陽介 、田谷俊彦 、上大介 、的場聖明 、五條理志
    • Organizer
      第85回日本循環器学会学術総会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Analysis of RNAs in processing body during epithelial mesenchymal transition2019

    • Author(s)
      Daisuke Kami, Satoshi Gojo
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Research-status Report

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Published: 2018-04-23   Modified: 2022-01-27  

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