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Establishment of new human pluripotent stem cell with unbiased differentiation potency.

Research Project

Project/Area Number 18K14714
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 44020:Developmental biology-related
Research InstitutionKyoto University

Principal Investigator

Nakamura Tomonori  京都大学, 白眉センター, 特定准教授 (90648429)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2020: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsカニクイザル / 多能性幹細胞 / scRNA-seq / 霊長類 / 高次元空間ノイズ / 次元の呪い / 分化偏向性
Outline of Final Research Achievements

Pluripotent stem cells (PSCs) are cells that can proliferate indefinitely while retaining the ability to contribute to whole adult cells. In this study, we attempted to establish a new culture system that eliminates the differentiation bias seen in human PSCs by mimicking the environment in vivo. Since the target in vivo pluripotent cells correspond immediately after implantation, we aimed to analyze the traits of cynomolgus monkey implantation embryos using scRNA-seq, examine the culture conditions using the monkey PSC, and reproduce them in human PSC. In this process, we have established a new robust and stable culture system for monkey PSC, which has been unstable, and surprisingly discovered a universal problem in scRNA-seq analysis, and found a solution.

Academic Significance and Societal Importance of the Research Achievements

ヒトiPSCが樹立されて以来、モデル動物としての非ヒト霊長類が見直されてきている。また、霊長類に関わらず昨今の分子生物学ではscRNA-seqを筆頭に単一細胞レベルの研究領域に突入している。これらの状況を鑑みると本研究成果はこれからの時代の基礎となる知見や技術になり、学術的意義は高いと考える。今後本研究の成果をもとに有意義な研究を展開していきたい。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (13 results)

All 2021 2020 2019 2018

All Journal Article (7 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 7 results,  Open Access: 4 results) Presentation (5 results) (of which Int'l Joint Research: 2 results,  Invited: 5 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] GATA transcription factors, SOX17 and TFAP2C, drive the human germ-cell specification program2021

    • Author(s)
      Kojima Yoji、Yamashiro Chika、Murase Yusuke、Yabuta Yukihiro、Okamoto Ikuhiro、Iwatani Chizuru、Tsuchiya Hideaki、Nakaya Masataka、Tsukiyama Tomoyuki、Nakamura Tomonori、Yamamoto Takuya、Saitou Mitinori
    • Journal Title

      Life Science Alliance

      Volume: 4 Issue: 5 Pages: 202000974-202000974

    • DOI

      10.26508/lsa.202000974

    • NAID

      120006979739

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Capturing human trophoblast development with naive pluripotent stem cells in vitro2021

    • Author(s)
      S Io M Kabata Y Lemura N Morone A Minagawa B Wong I Okamoto T Nakamura Y Kojima C Iwatani H Tsuchiya B Kawswandy E KondohS Kaneko K Woltjen M Saitou T Yamanoto M Mandai Y Takashima
    • Journal Title

      Cell Stem Cell

      Volume: 21 Issue: 6 Pages: 10-10

    • DOI

      10.1016/j.stem.2021.03.013

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Cyclosporin A and FGF signaling support the proliferation/survival of mouse primordial germ cell-like cells in vitro†2020

    • Author(s)
      Ohta Hiroshi、Yabuta Yukihiro、Kurimoto Kazuki、Nakamura Tomonori、Murase Yusuke、Yamamoto Takuya、Saitou Mitinori
    • Journal Title

      Biology of Reproduction

      Volume: 104 Issue: 2 Pages: 344-360

    • DOI

      10.1093/biolre/ioaa195

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ZGLP1 is a determinant for the oogenic fate in mice2020

    • Author(s)
      Nagaoka So I.、Nakaki Fumio、Miyauchi Hidetaka、Nosaka Yoshiaki、Ohta Hiroshi、Yabuta Yukihiro、Kurimoto Kazuki、Hayashi Katsuhiko、Nakamura Tomonori、Yamamoto Takuya、Saitou Mitinori
    • Journal Title

      Science

      Volume: 367 Issue: 6482 Pages: 4115-4115

    • DOI

      10.1126/science.aaw4115

    • NAID

      120006850276

    • Related Report
      2020 Annual Research Report 2019 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Long‐term expansion with germline potential of human primordial germ cell‐like cells in?vitro2020

    • Author(s)
      Murase Yusuke、Yabuta Yukihiro、Ohta Hiroshi、Yamashiro Chika、Nakamura Tomonori、Yamamoto Takuya、Saitou Mitinori
    • Journal Title

      The EMBO Journal

      Volume: 39 Issue: 21 Pages: 104929-104929

    • DOI

      10.15252/embj.2020104929

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Induction of the germ cell fate from pluripotent stem cells in cynomolgus monkeys.2020

    • Author(s)
      Sakai Y, Nakamura T, Okamoto I, Gyobu-Motani S, Ohta H, Yabuta Y, Tsukiyama T, Iwatani C, Tsuchiya H, Ema M, Morizane A, Takahashi J, Yamamoto T, Saitou M.
    • Journal Title

      Biol Reprod

      Volume: 102(3) Issue: 3 Pages: 620-638

    • DOI

      10.1093/biolre/ioz205

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Generation of human oogonia from induced pluripotent stem cells in vitro.2018

    • Author(s)
      30.Yamashiro C, Sasaki K, Yabuta Y, Kojima Y, Nakamura T, Okamoto I, Yokobayashi S, Murase Y, Ishikura Y, Shirane K, Sasaki H, Yamamoto T, Saitou M.
    • Journal Title

      Science

      Volume: 362(6412) Issue: 6412 Pages: 356-360

    • DOI

      10.1126/science.aat1674

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Presentation] 霊長類特異的多能性状態の解明2020

    • Author(s)
      Tomonori Nakamura* , Yusuke Imoto, Yasuaki Hiraoka, Mitinori Saitou
    • Organizer
      第53回発生生物学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Identifying cells hidden by curse of dimensionality2020

    • Author(s)
      Tomonori Nakamura
    • Organizer
      The 1st ASHBi SignAC international workshop 2021
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Dissecting the spectrum of pluripotency in primates2020

    • Author(s)
      Tomonori Nakamura
    • Organizer
      第53回日本発生生物学会年会
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Induction of the Germ-Cell Fate from Pluripotent Stem Cells in Cynomolgus Monkeys2019

    • Author(s)
      Tomonori Nakamura
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 次元の呪い~高次元観測データにおけるノイズとノイズ低減解析法~2019

    • Author(s)
      中村友紀
    • Organizer
      第6回六甲医学研究会
    • Related Report
      2019 Research-status Report
    • Invited
  • [Patent(Industrial Property Rights)] 観測ノイズ削減法の開発2020

    • Inventor(s)
      井元祐介、中村友紀、平岡、斎藤通紀
    • Industrial Property Rights Holder
      井元祐介、中村友紀、平岡、斎藤通紀
    • Industrial Property Rights Type
      特許
    • Filing Date
      2020
    • Related Report
      2020 Annual Research Report

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Published: 2018-04-23   Modified: 2023-12-25  

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