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The roles of R-loop structure in DNA damage signaling and genome

Research Project

Project/Area Number 18K18191
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 63020:Radiation influence-related
Research InstitutionThe University of Tokyo

Principal Investigator

Yasuhara Takaaki  東京大学, 大学院医学系研究科(医学部), 助教 (90757056)

Project Period (FY) 2018-04-01 – 2022-03-31
Project Status Discontinued (Fiscal Year 2021)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2021: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2020: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2019: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2018: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
KeywordsR-loop構造 / DNA二重鎖切断 / DNA損傷シグナリング / DNA修復
Outline of Final Research Achievements

In this study, we revealed that R-loops, a special structure consisting of DNA and RNA, are formed when DNA double-strand breaks are induced in the transcribed genomic regions. Moreover, recognition of R-loops by Rad52 promotes the activation of the accurate repair pathway, or homologous recombination repair, a mechanism designated as Transcription-Associated Homologous Recombination Repair (TA-HRR). Furthermore, we demonstrated that inhibiting TA-HRR significantly increased interchromatid fusions, a precursor of genomic abnormalities frequently observed in cancer, suggesting that TA-HRR is critical for suppressing cancer development.
These findings represent an inherent mechanism by which human cells suppress cancer development. Detailed understanding of these kinds of protection mechanisms in human cells and how the collapse of these mechanisms leads to development of diseases may pave the way for finding a novel target to develop new drugs.

Academic Significance and Societal Importance of the Research Achievements

今回明らかになった転写共役型相同組換え修復のメカニズムは、ゲノム異常を原因として生じるがんなどの疾患を防ぐために細胞が保持している防御機構の一つであり、それらの破綻は疾患の発症と密接に関連していることが示唆された。このようなメカニズムの解明によって将来的には、疾患を予防したり、治療したりする手法の開発につながると考えられる。

Report

(4 results)
  • 2021 Final Research Report ( PDF )
  • 2020 Annual Research Report
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (18 results)

All 2020 2019 2018 Other

All Int'l Joint Research (6 results) Journal Article (6 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 5 results,  Open Access: 4 results) Presentation (3 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results) Remarks (3 results)

  • [Int'l Joint Research] マサチューセッツ総合病院(米国)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] オックスフォード大学(英国)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] マサチューセッツ総合病院(米国)

    • Related Report
      2019 Research-status Report
  • [Int'l Joint Research] オックスフォード大学(英国)

    • Related Report
      2019 Research-status Report
  • [Int'l Joint Research] マサチューセッツ総合病院(米国)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] オックスフォード大学(英国)

    • Related Report
      2018 Research-status Report
  • [Journal Article] RNF8 promotes high linear energy transfer carbon-ion-induced DNA double-stranded break repair in serum-starved human cells2020

    • Author(s)
      Nakajima Nakako Izumi、Yamauchi Motohiro、Kakoti Sangeeta、Cuihua Liu、Kato Reona、Permata Tiara Bunga Mayang、Iijima Moito、Yajima Hirohiko、Yasuhara Takaaki、Yamada Shigeru、Hasegawa Sumitaka、Shibata Atsushi
    • Journal Title

      DNA Repair

      Volume: 91-92 Pages: 102872-102872

    • DOI

      10.1016/j.dnarep.2020.102872

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] p53 deficiency augments nucleolar instability after ionizing irradiation.2019

    • Author(s)
      Kakoti, S., Yamauchi, M., Gu, W., Kato, R., Yasuhara, T., Hagiwara, Y., Laskar, S., Oike, T., Sato, H., Held, KD., Nakano, T., and Shibata, A.
    • Journal Title

      Oncology Reports

      Volume: 42 Pages: 2293-2302

    • DOI

      10.3892/or.2019.7341

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The role of R-loops in transcription-associated DNA double-strand break repair2019

    • Author(s)
      Kato Reona、Miyagawa Kiyoshi、Yasuhara Takaaki
    • Journal Title

      Molecular & Cellular Oncology

      Volume: 6 Issue: 1 Pages: 1542244-1542244

    • DOI

      10.1080/23723556.2018.1542244

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Elucidation of the Mechanism Regulating Transcription Associated Dna Double Strand Break Repair and Its Pathway2019

    • Author(s)
      Shibata Atsushi、Yasuhara Takaaki
    • Journal Title

      Impact

      Volume: 2019 Issue: 3 Pages: 50-51

    • DOI

      10.21820/23987073.2019.3.50

    • Related Report
      2018 Research-status Report
  • [Journal Article] Base excision repair regulates PD-L1 expression in cancer cells2019

    • Author(s)
      Permata, MBT, Hagiwara, Y., Sato, H., Yasuhara, T., Oike, T., Gondhowiardjo, S., Held, KD, Nakano, T., and Shibata, A.
    • Journal Title

      Oncogene

      Volume: 印刷中 Issue: 23 Pages: 4452-4466

    • DOI

      10.1038/s41388-019-0733-6

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Human Rad52 Promotes XPG-Mediated R-loop Processing to Initiate Transcription-Associated Homologous Recombination Repair2018

    • Author(s)
      Yasuhara Takaaki、Kato Reona、Hagiwara Yoshihiko、Shiotani Bunsyo、Yamauchi Motohiro、Nakada Shinichiro、Shibata Atsushi、Miyagawa Kiyoshi
    • Journal Title

      Cell

      Volume: 175 Issue: 2 Pages: 558-570

    • DOI

      10.1016/j.cell.2018.08.056

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] RNA転写とDNA二重鎖切断修復のクロストーク2019

    • Author(s)
      安原崇哲
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Research-status Report
    • Invited
  • [Presentation] Rad52 promotes XPG-mediated R-loop processing to initiate transcription-associated homologous recombination repair2019

    • Author(s)
      Takaaki Yasuhara、Kato Reona、Shibata Atsushi、Miyagawa Kiyoshi
    • Organizer
      Keystone Symposia - Genomic Instability and DNA Repair
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Rad52 promotes XPG-mediated R-loop processing to initiate transcription-associated homologous recombination repair2018

    • Author(s)
      Takaaki Yasuhara、Kato Reona、Shibata Atsushi、Miyagawa Kiyoshi
    • Organizer
      Abcam meeting - Mechanisms of Recombination 2018
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Remarks] 東京大学大学院医学系研究科 プレスリリース

    • URL

      http://www.m.u-tokyo.ac.jp/news/admin/release_20180921.pdf

    • Related Report
      2018 Research-status Report
  • [Remarks] UTokyo Research 日本語版

    • URL

      https://www.u-tokyo.ac.jp/focus/ja/articles/z0508_00107.html

    • Related Report
      2018 Research-status Report
  • [Remarks] UTokyo Research English

    • URL

      https://www.u-tokyo.ac.jp/focus/en/articles/z0508_00108.html

    • Related Report
      2018 Research-status Report

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Published: 2018-04-23   Modified: 2023-01-30  

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