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Search of the gene conferring tannin accumulation in persimmon fruit and its utilization for the analysis of genome composition and the seedling selection

Research Project

Project/Area Number 19380019
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Horticulture/Landscape architecture
Research InstitutionKyoto University

Principal Investigator

YONEMORI Keizo  Kyoto University, 農学研究科, 教授 (10111949)

Co-Investigator(Kenkyū-buntansha) YAMADA Masahiko  果樹研究所, ブドウ・カキ研究チーム, 上席研究員 (00355439)
SATO Akihiko  果樹研究所, ブドウ・カキ研究チーム, 上席研究員 (30355440)
TAO Ryutaro  京都大学, 農学研究科, 准教授 (10211997)
YAMANE Hisayo  京都大学, 農学研究科, 助教 (80335306)
北島 宣  近畿大学, 農学部, 講師 (70135549)
Co-Investigator(Renkei-kenkyūsha) KANNZAKI Shinya  近畿大学, 農学部, 講師 (20330243)
Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥20,540,000 (Direct Cost: ¥15,800,000、Indirect Cost: ¥4,740,000)
Fiscal Year 2009: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2008: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2007: ¥11,440,000 (Direct Cost: ¥8,800,000、Indirect Cost: ¥2,640,000)
Keywordsマメガキ / 倍数体 / 甘渋性決定遺伝子 / 転写因子 / 定量PCR / DNAマーカー / 遺伝子単離 / プロアントシアニジン / AFLP / 羅田甜柿 / 甘渋性関与遺伝子 / 遺伝子発現 / フラボノイド合成 / タンニン細胞
Research Abstract

The gene conferring the trait of astringency-loss in Japanese-type PCNA is shown to be located at 100kb away of fosmid contig constructed from Diospyros lotus, a close relative of D.kaki. This single gene controls the astringency trait in persimmon fruit and 6 alleles are responsible for the appearance of this trait. The DkMyb4, a regulatory gene, is also found to control tannin biosynthesis in the fruit and is indicated to determine whether an individual is PCNA or non-PCNA due to its strength of expression. Using the DNA sequences linked to this gene, we could construct a primer pair for PCR analysis for selecting PCNA offspring of Japanese-type. In addition, we also found an AFLP marker to distinguish Chinese-type PCNA among breeding population.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (24 results)

All 2010 2009 2008 2007 Other

All Journal Article (15 results) (of which Peer Reviewed: 14 results) Presentation (9 results)

  • [Journal Article] SCAR markers for practical application of marker-assisted selection in persimmon (Diospyros kaki Thunb. ) breeding2010

    • Author(s)
      S. Kanzaki, T. Akagi, T. Masuko, M. Kimura, M. Yamada, A. Sato, N. Mitani, N. Utsunomiya, K. Yonemori
    • Journal Title

      J. Japan. Soc. Hort. Sci. 79

      Pages: 150-155

    • NAID

      130004951602

    • Related Report
      2009 Final Research Report
  • [Journal Article] Quantitative genotyping for the astringency locus in hexaploid persimmon cultivars using quantitative real-time PCR2010

    • Author(s)
      T. Akagi, Y. Takeda, K. Yonemori, A. Ikegami, A. Kono, M. Yamada, S. Kanzaki
    • Journal Title

      J. Amer. Soc. Hort. Sci. 135

      Pages: 59-66

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative genotyping for the astringency locus in hexaploid persimmon cultivars using quantitative real-time PCR2010

    • Author(s)
      T.Akagi, Y.Takeda, K.Yonemori, A.Ikegami, A.Kono, M.Yamada, S.Kanzaki,
    • Journal Title

      J.Amer.Soc.Hort.Sci. 135

      Pages: 59-66

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] SCAR markers for practical application of marker-assisted selection in persimmon (Diospyros kaki Thunb.) breeding2010

    • Author(s)
      S.Kanzaki, T.Akagi, T Masuko, M.Kimura, M.Yamada, A.Sato, N.Mitani, N.Utsunomiya, K.Yonemori
    • Journal Title

      J.Japan.Soc.Hort.Sci. 79(in press)

    • NAID

      130004951602

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DkMyb4 is a Myb transcription factor involved in proanthocyanidin biosynthesis in persimmon fruit2009

    • Author(s)
      T. Akagi, A. Ikegami, T. Tsujimoto, S. Kobayashi, A. Sato, A. Kono, K. Yonemori
    • Journal Title

      Plant Physiology 151

      Pages: 2028-2045

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Construction of a reliable PCR marker for selecting pollination constant and non-astringent (PCNA) type offspring among breeding population of persimmon (Diospyros kaki Thunb. )2009

    • Author(s)
      K. Yonemori, T. Akagi, S. Kanzaki
    • Journal Title

      Acta Horticulturae 839

      Pages: 625-629

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative real-time PCR to determine allele number for the astringency locus by analysis of a linked marker in Diospyros kaki Thunb.2009

    • Author(s)
      T. Akagi, S. Kanzaki, M. Gao, R. Tao, D.E. Parfitt, K. Yonemori
    • Journal Title

      Tree Genetics & Genomes 5

      Pages: 483-492

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Conversion of RFLP Markers for the Selection of Pollination-Constant and Non-Astringent Type Persimmons (Diospyros kaki Thunb. ) into PCR-Based Markers2009

    • Author(s)
      S. Kanzaki, M. Yamada, A. Sato, N. Mitani, N. Utsunomiya, K. Yonemori
    • Journal Title

      J. Japan. Soc. Hort. Sci. 78

      Pages: 68-73

    • NAID

      130004951578

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Expression balances of structural genes in shikimate and flovonoid biosynthesis cause a difference in proanthocyanidin accumulation in persimmon (Diospyros kaki Thunb. ) fruit2009

    • Author(s)
      T. Akagi, A. Ikegami, Y. Suzuki, J. Yoshida, M. Yamada, A. Sato,, K. Yonemori
    • Journal Title

      Planta 230

      Pages: 899-915

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] DkMyb4 is a Myb transcription factor involved in proanthocyanidin biosynthesis in persimmon fruit2009

    • Author(s)
      T.Akagi, A.Ikegami, T.Tsujimoto, S.Kobayashi, A.Sato, A.Kono, K.Yonemori
    • Journal Title

      Plant Physiology 151

      Pages: 2028-2045

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conversion of RFLP Markers for the Selection of Pollination-Constant and Non-Astringent Type Persimmons (Diospyros kaki Thunb. ) into PCR-Based Markers2009

    • Author(s)
      S. Kanzaki, M. Yamada, A. Sato, N. Mitani, N. Utsunomiya, K. Yonemori
    • Journal Title

      Journal of the Japanese Society for HorticulturalScience 78(1)

      Pages: 68-73

    • NAID

      130004951578

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative real-time PCR to determine allele number for the astringency locus by analysis of a linked marker in Diospyros kaki Thunb.2009

    • Author(s)
      T. Akagi, S. Kanzaki, M. Gao, R. Tao, D. E. Parfitt, K. Yonemori
    • Journal Title

      Tree Genetics & Genomes (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Construction of a reliable PCR marker for selecting pollination constantand non-astringent (PCNA)type offspring among breeding population of persimmon (Diospyros kaki Thumb. )2009

    • Author(s)
      K. Yonemori, T. Akagi, S. Kanzaki
    • Journal Title

      Acta Horticulturae (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] RFLP markers for the selection of pollination-constant and non-astringent (PCNA)-type persimmon and examination of the inheritance mode of the markers2008

    • Author(s)
      S. Kanzaki, A. Sato, M. Yamada, N. Utsunomiya, A. Kitajima, A. Ikegami,, K. Yonemori
    • Journal Title

      J. Japan. Soc. Hort. Sci. 77

      Pages: 28-32

    • NAID

      130004951536

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] RFLP markers for the selection of pollination-constant and non-astringent (PCNA)-type persimmon and examination of the inheritance mode of the markers.2008

    • Author(s)
      S. Kanzaki, A. Sato, M. Yamada, N. Utsunomiya, A. Kitajima, A. Ikegami, and K. Yonemori
    • Journal Title

      Journal of the Japanese Society for Horticultural Science 77

      Pages: 28-32

    • NAID

      130004951536

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] Identification of the genetic region including astringency (AST) locus in hexaploid persimmon (Diospyros kaki Thunb. ) by positional cloning in a diploid relative, D. lotus2010

    • Author(s)
      T. Tsujimoto, T. Akagi, A. Kono, N. Mitani, K. Yonemori
    • Organizer
      Plant and Animal Genome XVIII
    • Place of Presentation
      San Diego, USA
    • Year and Date
      2010-01-11
    • Related Report
      2009 Final Research Report
  • [Presentation] カキの甘渋性を決定するDkMyb4の季節的発現制御因子についての解析2009

    • Author(s)
      赤木剛士・池上礼子・小林省三・佐藤明彦・米森敬三
    • Organizer
      園芸学会平成21年度秋季大会
    • Place of Presentation
      秋田大学手形キャンパス
    • Year and Date
      2009-09-26
    • Related Report
      2009 Annual Research Report 2009 Final Research Report
  • [Presentation] カキの甘渋性決定に関与する転写因子DkMyb4の同定2009

    • Author(s)
      赤木剛士・池上礼子・佐藤明彦・小林省三・米森敬三
    • Organizer
      園芸学会平成21年度春季大会
    • Place of Presentation
      明治大学駿河台キャンパス
    • Year and Date
      2009-03-19
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Presentation] Identification of the genetic region including astringency (AST) locus in hexaploid persimmon (Diospyros kaki Thunb.) by positional cloning in a diploid relative. D. lotus2009

    • Author(s)
      T.Tsujimoto, T.Akagi, A.Kono, N.Mitani, K.Yonemori
    • Organizer
      Plant and Animal Genome XVIII
    • Place of Presentation
      San Diego, USA
    • Year and Date
      2009-01-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] Analysis of differentially expressed genes in astringent fruit using suppression subtractive hybridization2008

    • Author(s)
      A. Ikegami, T. Akagi, M. Yamada, A. Kitajima, K. Yonemori
    • Organizer
      4th International Symposium on Persimmon
    • Place of Presentation
      Faenza, Italy
    • Year and Date
      2008-11-10
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Presentation] Molecular characterization of a marker locus linked to the AST gene in persimmon2008

    • Author(s)
      S. Kanzaki, T. Akagi, M. Yamada, N. Mitani, , K. Yonemori
    • Organizer
      Plant & Animal Genome XVI
    • Place of Presentation
      San Diego California, USA
    • Year and Date
      2008-01-14
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] Molecular marker linked to natural astringency-loss in Chinese-type PCNA persimmon (Diospyros kaki Thunb.) fruit.2007

    • Author(s)
      K. Yonemori, S. Eguchi, A. Ikegami Y. Sakaguchi, T. Akagi, A. Kitajima M. Yamada, and Dan E. Parfitt.
    • Organizer
      104th Annual International Conference of the American Society for Horticultural Science
    • Place of Presentation
      Scottsdale, Arizona, USA
    • Year and Date
      2007-07-18
    • Related Report
      2007 Annual Research Report
  • [Presentation] カキ果実で発現するフラボノイド合成系に関連した転写因子群の単離とタンニン蓄積への関与2007

    • Author(s)
      赤木剛士・吉田純一・山田昌彦・米森敬三
    • Organizer
      園芸学会平成19年度秋季大会
    • Place of Presentation
      香川大学幸町キャンパス
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] Molecular marker linked to natural astringency-loss in Chinese-type PCNA persimmon (Diospyros kaki Thunb. ) fruit

    • Author(s)
      K. Yonemori, S. Eguchi, A. Ikegami, Y. Sakaguchi, T. Akagi, A. Kitajima, M. Yamada, , Dan E. Parfitt
    • Organizer
      104th Annual International Conference of the American Society for Horticultural Science
    • Place of Presentation
      Scottsdale, Arizona, USA
    • Related Report
      2009 Final Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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