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Production of aptamer by SELEX technique and its application to diagnosis

Research Project

Project/Area Number 19590571
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Laboratory medicine
Research InstitutionShowa University

Principal Investigator

ARAKAWA Hidetoshi  Showa University, 薬学部・薬品分析化学, 教授 (70129807)

Co-Investigator(Kenkyū-buntansha) OHNO Ken-ichi  昭和大学, 薬学部, 助教 (20347272)
Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2009: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2008: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2007: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords臨床化学 / アプタマー / SELEX / キャピラリー電気泳動 / βアミロイド / アルツハイマー / β-アミロイド / マイクロチップ電気泳動 / RNA / DNA / 人工核酸抗体
Research Abstract

Aptamers are nucleic acid ligands that recognize a wide range of target molecules with high affinity and specificity. They are generated by in vitro selection of a randomized oligonucleotide pool in a technique known as systematic evolution of ligands by exponential enrichment (SELEX). The development of in vitro selection and amplification technology has allowed the identification of specific aptamers that bind target molecules with high affinity and even discriminate between closely related targets. Their binding affinities are comparable to those of antibodies and antigens. In comparison to antibodies, aptamers have the advantages of (i) simple preparation by chemical or enzymatic synthesis, (ii) thermal stability, (iii) discrimination of structural differences, (iv) ease of surface attachment for analysis, (v) ease of binding property modification through minor changes in sequence, (vi) minimization of experimental animal usage, and (viii) preparation for targets that are toxic or not inherently immunogenic. Aptamers are suitable as analytical, diagnostic, and therapeutic tools in applications requiring molecular recognition and are consequently gaining increased attention for their potential uses. In this study, to develop new diagnosis method, we developed sensitive and high performance aptamer binding assay using microchip electorophoresis, and prepared new aptamers for HMG (human menopausal gonadotropin), amyloid-β peptide and oxytocin. At first, a assay for Thronbin was developed using thrombin aptamer and microchip electrophoresis method, the result showed detection limit of 1 pmol. Next we prepared aptamer for HMG by SELEX, and HMG was detected by using the aptamer in a similar manner. In addition, amyloid-β peptide and oxytocin aptmaers were prepared.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (10 results)

All 2010 2009 2008 2007 2006 Other

All Journal Article (8 results) (of which Peer Reviewed: 5 results) Presentation (1 results) Book (1 results)

  • [Journal Article] 生物発光を用いる生体成分の分析2010

    • Author(s)
      荒川秀俊
    • Journal Title

      臨床化学 39

      Pages: 30-37

    • NAID

      10026446087

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development of ultra-high sensitivity bioluminescent enzyme immunoassay for hepatitis B virus surface antigen using firefly luciferase2009

    • Author(s)
      荒川秀俊
    • Journal Title

      LUMINESCENCE 24

      Pages: 294-399

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development of bioluminescent pyrophosphate assay using pyruvate phosphate dikinase and its application to single-nucleotide2008

    • Author(s)
      Hidetoshi Arakawa
    • Journal Title

      Analytical Biochemistry 379

      Pages: 86-90

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] アプタマーを活用した分析化学(特集)2007

    • Author(s)
      荒川秀俊
    • Journal Title

      臨床化学 36(4)

      Pages: 108-115

    • Related Report
      2009 Final Research Report
  • [Journal Article] 〓 generation of hydrogen peroxide using isoluminol-microperoxidase in &2007

    • Author(s)
      Hidetoshi Arakawa
    • Journal Title

      Luminescence 22

      Pages: 245-250

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] アプタマーを活用した分析化学2007

    • Author(s)
      荒川 秀俊
    • Journal Title

      臨床化学 36

      Pages: 108-115

    • NAID

      10021186279

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Application of microchip electrophoresis in the analysis of RNA aptamer-protein interactions2006

    • Author(s)
      F. Nishikawa, H. Arakawa, S. Nishikawa
    • Journal Title

      Nucleic Acids Research 25

      Pages: 369-382

    • Related Report
      2009 Final Research Report
  • [Journal Article] Development of novel RNA aptamer and its ligand binding assay on microchip electrophoresis

    • Author(s)
      K. Ohno, T. Nakata, F. Nishikawa, S. Nishikawa, H. Arakawa
    • Journal Title

      Nucleic Acids Research, in submit.

    • Related Report
      2009 Final Research Report
  • [Presentation] The development of ultra-high sensitive bioluminescence enzyme immunoassay for hepatitis B virus antigen using firefly luciferase as2009

    • Author(s)
      荒川秀俊
    • Organizer
      2009AACC annyual meeting
    • Place of Presentation
      米国、シカゴ
    • Year and Date
      2009-07-21
    • Related Report
      2009 Annual Research Report
  • [Book] 現代界面コロイド化学の基礎2009

    • Author(s)
      荒川秀俊
    • Total Pages
      4
    • Publisher
      丸善株式会社
    • Related Report
      2009 Annual Research Report

URL: 

Published: 2007-04-01   Modified: 2016-04-21  

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