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D-amino acids and beta-amino acids : a new frontier in Ribosomal synthesis of non-standard polypeptides

Research Project

Project/Area Number 20681022
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Living organism molecular science
Research InstitutionThe University of Tokyo

Principal Investigator

MURAKAMI Hiroshi  The University of Tokyo, 大学院・総合文化研究科, 准教授 (10361669)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥24,960,000 (Direct Cost: ¥19,200,000、Indirect Cost: ¥5,760,000)
Fiscal Year 2010: ¥7,670,000 (Direct Cost: ¥5,900,000、Indirect Cost: ¥1,770,000)
Fiscal Year 2009: ¥9,620,000 (Direct Cost: ¥7,400,000、Indirect Cost: ¥2,220,000)
Fiscal Year 2008: ¥7,670,000 (Direct Cost: ¥5,900,000、Indirect Cost: ¥1,770,000)
Keywords生合成 / 翻訳合成 / D体アミノ酸 / ベータアミノ酸 / 非蛋白質性アミノ酸 / D-アミノ酸 / 翻訳
Research Abstract

It is believed that the ribosomal translation machinery does not accept D-amino acids and beta-amino acids. In this study, we investigated the incorporation of these non-proteinogenic amino acids into peptides, and found that the translation machinery actually accepts several kinds of D-amino acids as well as beta-amino acids. These results open the way for the ribosomal synthesis of novel non-standard peptides with main-chain modified groups, and would facilitate the use of these unique building blocks in peptides for drug discovery.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (16 results)

All 2010 2009 2008 Other

All Journal Article (3 results) (of which Peer Reviewed: 2 results) Presentation (12 results) Remarks (1 results)

  • [Journal Article] Bases in the anticodon loop of tRNA (Ala) (GGC) prevent misreading.2009

    • Author(s)
      Murakami, H., Ohta, A., Suga, H
    • Journal Title

      Nat.Struct.Mol.Biol. 16

      Pages: 353-358

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Bases in the anticodon loop of tRNA(Ala)(GGC)prevent misreading2009

    • Author(s)
      Murakami, H., Ohta, A., Suga, H
    • Journal Title

      Nat.Struct.Mol.Biol. 16

      Pages: 353-358

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 新創薬技術RAPIDシステムとマイクロ・ナノディバイスへの期待2008

    • Author(s)
      村上裕・菅裕明
    • Journal Title

      化学工業 59

      Pages: 463-469

    • Related Report
      2010 Final Research Report 2008 Annual Research Report
  • [Presentation] Flexible in vitro translation system for development of non-standard peptide inhibitors2010

    • Author(s)
      Murakami, H., Yuki Goto, Hiroaki Suga
    • Organizer
      Pacifichem2010
    • Place of Presentation
      Hawaii Convention Center, Honolulu, Hawaii, USA
    • Year and Date
      2010-12-18
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 進化工学の創薬への応用2010

    • Author(s)
      村上裕
    • Organizer
      第2回バイオサイエンスリトリート
    • Place of Presentation
      長岡技術大学
    • Year and Date
      2010-11-27
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] フレキシブル無細胞翻訳系を用いた特殊ペプチドの創製2010

    • Author(s)
      村上裕
    • Organizer
      第4回バイオ関連化学シンポジウム
    • Place of Presentation
      大阪大学
    • Year and Date
      2010-09-24
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 翻訳系の研究と応用2009

    • Author(s)
      Murakami, H.
    • Organizer
      細胞を創る2009
    • Place of Presentation
      東京、東京大学本郷
    • Year and Date
      2009-10-02
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Bases in the anticodon loop of tRNA^<Ala> GGC evolved to avoid misreading2009

    • Author(s)
      村上裕, Ohta, A., Suga, H
    • Organizer
      2nd Switzerland-Japan Biomolecular Chemistry Symposium
    • Place of Presentation
      東京、東京大学駒場II
    • Year and Date
      2009-09-11
    • Related Report
      2010 Final Research Report
  • [Presentation] Bases in the anticodon loop of tRNA^<Ala>_<GGC> evolved to avoid misreading2009

    • Author(s)
      Murakami, H., Ohta, A., Suga, H
    • Organizer
      2nd Switzerland-Japan Biomolecular Chemistry Symposium
    • Place of Presentation
      東京、東京大学駒場II
    • Year and Date
      2009-09-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] 特殊ペプチドの翻訳合成-創薬を目指した新技術の開発2009

    • Author(s)
      村上裕
    • Organizer
      2008年度第二回東京大学工学部化学生命工学科談話会
    • Place of Presentation
      本郷、東京大学
    • Year and Date
      2009-02-07
    • Related Report
      2010 Final Research Report
  • [Presentation] 特殊ペプチドの翻訳合成-創薬を自指した新技術の開発-2009

    • Author(s)
      村上裕
    • Organizer
      2008年度第二回東京大学工学部化学生命工学科談話会
    • Place of Presentation
      本郷、東京大学
    • Year and Date
      2009-02-07
    • Related Report
      2008 Annual Research Report
  • [Presentation] 特殊ペプチドの翻訳合成-創薬を目指した新技術の創成2008

    • Author(s)
      村上裕
    • Organizer
      第11回生命化学研究会
    • Place of Presentation
      群馬県、水上館
    • Year and Date
      2008-11-19
    • Related Report
      2010 Final Research Report 2008 Annual Research Report
  • [Presentation] 特殊ペプチドの翻訳合成2008

    • Author(s)
      村上裕
    • Organizer
      大阪大学蛋白質研究所セミナー
    • Place of Presentation
      吹田、大阪大学
    • Year and Date
      2008-09-25
    • Related Report
      2010 Final Research Report 2008 Annual Research Report
  • [Presentation] Ribosomal synthesis of non-natural peptides for drug discovery2008

    • Author(s)
      Murakami, H., Hiroaki Suga
    • Organizer
      第22回内藤コンファレンス ケミカルバイオロジー[I]
    • Place of Presentation
      札幌、シャトレーゼ ガトーキングダム
    • Year and Date
      2008-09-11
    • Related Report
      2010 Final Research Report
  • [Presentation] Ribosomal synthesis of non-natural peptides for drug discovery2008

    • Author(s)
      Hiroshi Murakanii and Hiroaki Suga
    • Organizer
      第22回内藤コンファレンスケミカルバイオロジー[I]
    • Place of Presentation
      札幌、シャトレーゼガトーキングダム
    • Year and Date
      2008-09-10
    • Related Report
      2008 Annual Research Report
  • [Remarks] ホームページ等

    • Related Report
      2010 Final Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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