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Genomic profiling of gastric carcinoma in situ by array-based comparative genomic hybridization

Research Project

Project/Area Number 20790286
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Human pathology
Research InstitutionOita University

Principal Investigator

TSUKAMOTO Yoshiyuki  Oita University, 医学部, 助教 (00433053)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2009: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2008: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords分子病理 / アレイCGH / 早期胃癌 / 胃腺腫 / ゲノムコピー数異常 / 進行胃癌
Research Abstract

Although genomic copy number aberrations (CNAs) of gastric carcinoma at the advanced stage have already been extensively characterized by array comparative genomic hybridization (array CGH) analysis, those of gastric carcinoma in situ (CIS) are still poorly understood. In this study, we investigated CNAs of 20 gastric CISs (Vienna category 4.2) using oligonucleotide-based array CGH. The most frequent aberrations in CIS were gains at 8q (85%) and 20q (50%), and losses at 5q (50%) and 17p (50%), suggesting that these CNAs are involved in the development of CIS.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • Research Products

    (12 results)

All 2010 2009 2008 Other

All Journal Article (6 results) (of which Peer Reviewed: 4 results) Presentation (5 results) Remarks (1 results)

  • [Journal Article] Genomic profiling of gastric carcinoma in situ and adenomas by array-based comparative genomic hybridization2010

    • Author(s)
      Uchida M, Tsukamoto Y, et al.
    • Journal Title

      Journal of Pathology 221

      Pages: 96-105

    • Related Report
      2009 Final Research Report
  • [Journal Article] MicroRNA-375 is downregulated in gastric carcinomas and regulates cell survival by targeting PDK1 and 14-3-3zeta2010

    • Author(s)
      Tsukamoto Y, et al.
    • Journal Title

      Cancer Research 70

      Pages: 2339-49

    • Related Report
      2009 Final Research Report
  • [Journal Article] Genomic profiling of gastric carcinoma in situ and adenomas byarray-based comparative genomic hybridization.2010

    • Author(s)
      Uchida M, Tsukamoto Y, et al.
    • Journal Title

      Journal of Patholgy 221

      Pages: 96-105

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MicroRNA-375 is downregulated in gastric carcinomas and regulates cell survival by targeting PDK1 and 14-3-3zeta.2010

    • Author(s)
      Tsukamoto Y, et al.
    • Journal Title

      Cancer Research 70

      Pages: 2339-2349

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome-wide analysis of DNA copy number alterations and gene expres sion in gastric cancer2008

    • Author(s)
      Tsukamoto, et.al.
    • Journal Title

      Journal of Pathology 216

      Pages: 471-482

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome-wide microRNA expression profiling in renal cell carcinoma : significant down-regulation of miR-141 and miR-200c2008

    • Author(s)
      Nakada, et.al.
    • Journal Title

      Journal of Pathology 216

      Pages: 418-427

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] Genome-wide microRNA expression profiling in gastric carcinoma2009

    • Author(s)
      塚本善之
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] Genome-wide microRNA expression profiling in gastric carcinoma2009

    • Author(s)
      塚本善之
    • Organizer
      第68回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-10-02
    • Related Report
      2009 Annual Research Report
  • [Presentation] Genome-wide analysis of DNA copy number alterations and gene expression in gastric cancer2008

    • Author(s)
      塚本善之
    • Organizer
      日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2008-10-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] Genome-wide microRNA expression profiling in gastric carcinoma

    • Author(s)
      塚本善之
    • Organizer
      第68回日本癌学会学術総会塚本善之
    • Related Report
      2009 Final Research Report
  • [Presentation] Genome-wide microRNA expression profiling in gastric carcinoma

    • Author(s)
      塚本善之
    • Organizer
      第32回日本分子生物学会年会
    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.med.oita-u.ac.jp/byori2/index.htm

    • Related Report
      2009 Final Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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