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Study for developing information of cis-elements related to regulation of gene expression in rice

Research Project

Project/Area Number 20880041
Research Category

Grant-in-Aid for Young Scientists (Start-up)

Allocation TypeSingle-year Grants
Research Field Breeding science
Research InstitutionNational Institute of Agrobiological Sciences

Principal Investigator

SATO Yutaka  National Institute of Agrobiological Sciences, ゲノムリソースセンター, 任期付研究員 (90510694)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥3,302,000 (Direct Cost: ¥2,540,000、Indirect Cost: ¥762,000)
Fiscal Year 2009: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2008: ¥1,742,000 (Direct Cost: ¥1,340,000、Indirect Cost: ¥402,000)
Keywords遺伝子発現 / シス配列 / マイクロアレイ / 転写因子 / イネ
Research Abstract

In order to construct an analysis tool for identifying cis-elements related to regulation of gene expression, we extracted the sequences of putative promoter regions of all annotated genes in rice, which correspond to the 1kb and 2kb from the start point of transcription for each gene, and performed a wide range of co-expression analyses. Furthermore, we designed probes for protein binding microarray in order to extract the sequence, with which a transcription factor directly interact.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report

URL: 

Published: 2008-04-01   Modified: 2016-04-21  

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