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Development and application of site specific fluorescent labeling of proteins

Research Project

Project/Area Number 21790115
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Drug development chemistry
Research InstitutionNagoya City University

Principal Investigator

UMEZAWA Naoki  Nagoya City University, 大学院・薬学研究科, 准教授 (40347422)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2009: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywords医薬分子機能学 / 生体機能関連化学 / 蛍光標識 / ペプチド / タンパク質 / 蛍光色素 / 金属錯体
Research Abstract

We have developed "turn-on" fluorescent probes for labeling of His-tag ((His)_6), which later turned out to have some problems. The purpose of this research is the clarification and solution of these problems, to develop useful methodology for fluorescently label proteins. The main problem of our probes is the weak binding to His-tag without N-terminal primary amino group. We determined the problem is mainly due to the His-tag recognition site, a metal complex. We explored the better His-tag recognition site and identified a metal-complex, which can bind to His-tag at any position.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (13 results)

All 2011 2010 2009 Other

All Journal Article (6 results) (of which Peer Reviewed: 3 results) Presentation (2 results) Remarks (3 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article]2010

    • Author(s)
      Naoki Umezawa, Nobuyoshi Matsumoto, Shinsuke Iwama, Nobuki Kato, Tsunehiko Higuchi
    • Journal Title

      Bioorg. Med. Chem. 18(17)

      Pages: 6340-6350

    • Related Report
      2010 Final Research Report
  • [Journal Article]2010

    • Author(s)
      Shinya Mimasu, Naoki Umezawa, Shin Sato, Tsunehiko Higuchi, Takashi Umehara, Shigeyuki Yokoyama
    • Journal Title

      Biochemistry 49(30)

      Pages: 6494-6503

    • Related Report
      2010 Final Research Report
  • [Journal Article] Facile synthesis of peptide-porphyrin conjugates : Towards artificial catalase2010

    • Author(s)
      N.Umezawa, N.Matsumoto, S.Iwama, N.Kato, T.Higuchi
    • Journal Title

      Bioorg.Med.Chem.

      Volume: 18 Pages: 6340-6350

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structurally designed trans-2-phenylcyclopropylamine derivatives potently inhibit histone demethylase LSD1/KDM12010

    • Author(s)
      S.Mimasu, N.Umezawa, S.Sato, T.Higuchi, T.Umehara, S.Yokoyama
    • Journal Title

      Biochemistry

      Volume: 49 Pages: 6494-6503

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article]2009

    • Author(s)
      Mie Kamoto, Naoki Umezawa, Nobuki Kato, Tsunehiko Higuchi
    • Journal Title

      Bioorg. Med. Chem. Lett. 19(8)

      Pages: 2285-2288

    • Related Report
      2010 Final Research Report
  • [Journal Article] Turn-on fluorescent probe with visible light excitation for labeling of hexahistidine tagged protein2009

    • Author(s)
      M.Kamoto, N.Umezawa, N.Kato T.Higuchi
    • Journal Title

      Bioorg.Med.Chem.Lett. 19

      Pages: 2285-2288

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] フォルダマーを用いた医薬化学:γ-セクレターゼ阻害剤の開発2011

    • Author(s)
      梅澤直樹
    • Organizer
      日本薬学会第131年会
    • Place of Presentation
      静岡
    • Year and Date
      2011-03-31
    • Related Report
      2010 Annual Research Report
  • [Presentation]

    • Author(s)
      梅澤直樹
    • Organizer
      日本薬学会第131年会、S31-6
    • Place of Presentation
      静岡
    • Related Report
      2010 Final Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.phar.nagoya-cu.ac.jp/hp/ysk/index.html

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.phar.nagoya-cu.ac.jp/hp/ysk/index.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.phar.nagoya-cu.ac.jp/hp/ysk/index.html

    • Related Report
      2009 Annual Research Report
  • [Patent(Industrial Property Rights)] キナーゼ活性検出法2011

    • Inventor(s)
      梅澤直樹、秋田昌二、樋口恒彦
    • Industrial Property Rights Holder
      名古屋市立大学
    • Acquisition Date
      2011-02-10
    • Related Report
      2010 Final Research Report
  • [Patent(Industrial Property Rights)] 抗マラリア活性化合物及び抗マラリア薬2010

    • Inventor(s)
      樋口恒彦、梅澤直樹、加藤信樹
    • Industrial Property Rights Holder
      名古屋市立大学/(株)セラバリューズ
    • Industrial Property Number
      2010-198651
    • Filing Date
      2010-09-06
    • Related Report
      2010 Annual Research Report 2010 Final Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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