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Comprehensive analysis of GmNAC family in soybean for improvement of drought resistance

Research Project

Project/Area Number 21870046
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Plant molecular biology/Plant physiology
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

TRAN Lam-Son・P  The Institute of Physical and Chemical Research, 発現調節研究ユニット, ユニットリーダー (10549009)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥2,717,000 (Direct Cost: ¥2,090,000、Indirect Cost: ¥627,000)
Fiscal Year 2010: ¥1,222,000 (Direct Cost: ¥940,000、Indirect Cost: ¥282,000)
Fiscal Year 2009: ¥1,495,000 (Direct Cost: ¥1,150,000、Indirect Cost: ¥345,000)
Keywordsダイズ / 転写因子 / GmNAC / データベース / シス因子解析 / アノテーション
Research Abstract

We have identified the repertoire of soybean transcription factor (TFs), within which the GmNAC family and its upstream regulatory two-component systems (TCSs) were analyzed in more details. Our study provides a solid foundation for selection of potential GmNAC gene candidates and respective promoters for the improvement of drought resistance in soybean via genetic engineering, and first insight in upstream regulating TCSs of drought-responsive NAC signaling.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (24 results)

All 2011 2010 2009 Other

All Journal Article (17 results) (of which Peer Reviewed: 14 results) Presentation (1 results) Book (1 results) Remarks (5 results)

  • [Journal Article] Genome-wide survey and expression analysis of plant-specific NAC transcription factor family in soybean during development and dehydration stress.2011

    • Author(s)
      Le TD, Nishiyama R, Watanabe Y, Mochida K, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS
    • Journal Title

      DNA Res (accepted)

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Progress studies of drought-responsive genes in rice.2011

    • Author(s)
      Hadiarto T, Tran LS
    • Journal Title

      Plant Cell Reports 30

      Pages: 297-310

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Progress studies of drought-responsive genes in rice2011

    • Author(s)
      Toto Hadiarto
    • Journal Title

      Plant Cell Reports

      Volume: 30 Pages: 297-310

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] LegumeTFDB : An integrative database of Glycine max, Lotus japonicus and Medicago truncatula transcription factors.2010

    • Author(s)
      Mochida K, Yoshida T, Sakurai T, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS
    • Journal Title

      Bioinformatics 26

      Pages: 290-291

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genome-wide analysis of two-component system and prediction of stress-responsive TCS members in soybean.2010

    • Author(s)
      Mochida K, Yoshida T, Sakurai T, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS
    • Journal Title

      DNA Res 17

      Pages: 303-324

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Amino acids conferring herbicide resistance in tobacco acetohydroxyacid synthase.2010

    • Author(s)
      Le TD, Choi J-D, Tran LS
    • Journal Title

      GM Crops 1

      Pages: 62-67

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Potential utilization of NAC transcription factors to enhance abiotic stress tolerance in plants by biotechnological approach.2010

    • Author(s)
      Tran LS, Nishiyama R, Yamaguchi-Shinozaki K, Shinozaki K
    • Journal Title

      GM Crops 1

      Pages: 34-41

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Functional genomics of soybean for improvement of productivity in adverse conditions.2010

    • Author(s)
      Tran LS, Mochida K
    • Journal Title

      Funct Integr Genomics 10

      Pages: 447-462

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A platform for functional prediction and comparative analyses of transcription factors of legumes and beyond.2010

    • Author(s)
      Tran LS, Mochida K
    • Journal Title

      Plant Signal Behav(Addendum to Mochida K et al. Bioinformatics 26: 290-291) 5

      Pages: 550-552

    • Related Report
      2010 Final Research Report
  • [Journal Article] Identification and prediction of abiotic stress responsive transcription factors involved in abiotic stress signaling in soybean.2010

    • Author(s)
      Tran LS, Mochida K
    • Journal Title

      Plant Signal Behav(Addendum to Mochida K et al. DNA Res 16: 353-369) 5

      Pages: 255-257

    • Related Report
      2010 Final Research Report
  • [Journal Article] Role of cytokinin responsive two- component system in ABA and osmotic stress signalings.2010

    • Author(s)
      Tran LS, Shinozaki K, Yamaguchi-Shinozaki K
    • Journal Title

      Plant Signal Behav(Addendum to Tran LS et al. PNAS 104: 20623-8) 5

      Pages: 148-150

    • Related Report
      2010 Final Research Report
  • [Journal Article] Genome-wide analysis of two-component system and prediction of stress-responsive TCS members in soybean2010

    • Author(s)
      Mochida K
    • Journal Title

      DNA Research

      Volume: 17 Pages: 303-324

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Functional genomics of soybean for improvement of productivity in adverse conditions2010

    • Author(s)
      Tran LS
    • Journal Title

      Functional & Integrative Genomics

      Volume: 10 Pages: 447-462

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] LegumeTFDB : An integrative database of Glycine max, Lotus japonicus and Medicago truncatula transcription factors2010

    • Author(s)
      Mochida K.
    • Journal Title

      Bioinformatics 26

      Pages: 290-291

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean.2009

    • Author(s)
      Mochida K, Yoshida T, Sakurai T, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS
    • Journal Title

      DNA Res 16

      Pages: 353-369

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean2009

    • Author(s)
      Mochida K.
    • Journal Title

      DNA Research 16

      Pages: 353-369

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Physiological and molecular approaches to improve drought resistance in soybean2009

    • Author(s)
      Manavalan L.P.
    • Journal Title

      Plant Cell Physiology 50

      Pages: 1260-1276

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] LegumeTFDB : An integrative database for functional genomics of Glycine max, Lotus japonicus and Medicago truncatula transcription factors2010

    • Author(s)
      Mochida K
    • Organizer
      The 21^<th> International Conference on Arabidopsis Research
    • Place of Presentation
      横浜、日本
    • Related Report
      2010 Annual Research Report
  • [Book] Environmental Adaptations and Stress Tolerance of Plants in the Era of Climatic Change(eds.Ahmad P and Prasad MNV)(Transcription factors involved in environmental stress response in plants)2011

    • Author(s)
      Xin H, Qin F, Tran LS
    • Publisher
      Springer Science, New York, NY 10013, USA(in press)
    • Related Report
      2010 Final Research Report
  • [Remarks] ホームページ等

    • URL

      http://labs.psc.riken.jp/spru/

    • Related Report
      2010 Final Research Report
  • [Remarks] ダイズの全転写因子データベース(SoybeanTFDB)

    • URL

      http://soybeantfdb.psc.riken.jp

    • Related Report
      2010 Final Research Report
  • [Remarks] マメ科植物の転写因子統合データベース(LegumeTFDB)

    • URL

      http://legumetfdb.psc.riken.jp/index.pl

    • Related Report
      2010 Final Research Report
  • [Remarks] ダイズ転写因子データベース:SoybeanTFDB

    • URL

      http://soybeantfdb.psc.riken.jp

    • Related Report
      2009 Annual Research Report
  • [Remarks] マメ科植物転写因子データベース:LegumeTFDB

    • URL

      http://legumetfdb.psc.riken.jp/index.pl

    • Related Report
      2009 Annual Research Report

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Published: 2009-04-01   Modified: 2021-04-07  

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