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Two-photon live image rendering - volume exploration of micro biological structure

Research Project

Project/Area Number 22300156
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biomedical engineering/Biological material science
Research InstitutionNara Institute of Science and Technology

Principal Investigator

MINATO Kotaro  奈良先端科学技術大学院大学, 情報科学研究科, 教授 (00127143)

Co-Investigator(Kenkyū-buntansha) SUGIURA Tadao  奈良先端科学技術大学院大学, 情報科学研究科, 准教授 (60304010)
SATO Tetsuo  奈良先端科学技術大学院大学, 情報科学研究科, 助教 (90362839)
NAKAO Megumi  京都大学, 情報学研究科, 准教授 (10362526)
Co-Investigator(Renkei-kenkyūsha) NEMOTO Tomomi  北海道大学, 電子科学研究所, 教授 (50291084)
KAWAKAMI Ryosuke  北海道大学, 電子科学研究所, 助教 (40508818)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥14,430,000 (Direct Cost: ¥11,100,000、Indirect Cost: ¥3,330,000)
Fiscal Year 2012: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2011: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2010: ¥6,890,000 (Direct Cost: ¥5,300,000、Indirect Cost: ¥1,590,000)
Keywordsバイオイメージング / 知的可視化 / 二光子顕微鏡
Research Abstract

We developed a system for visualizing 3-d micro biological structure in real-time. The system can also be utilized by biological researchers both in visualization and analysis.With the help of biological researchers, a network of nervous system in the brain can be visualized and that image consists of 2000 x 2000 x 2000 volume matrices. A complex circuit of the brain nervous system is proved by our visualization system.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (39 results)

All 2013 2012 2011 2010 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results) Presentation (24 results) (of which Invited: 1 results) Book (6 results)

  • [Journal Article] Respiratory Motion and Correlation Simulation Platform for Coronary MR Angiography2013

    • Author(s)
      F. R. Punzalan, Tetsuo Sato, T. Okada,S. Kuhara, K. Togashi and Kotaro Minato
    • Journal Title

      IEICE Trans. on Information and Systems

      Volume: E96-D(1) Pages: 111-119

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Respiratory Motion and Correlation Simulation Platform for Coronary MR Angiography2013

    • Author(s)
      Florencio Rusty Punzalan
    • Journal Title

      IEICE Trans. on Information and Systems

      Volume: E96-D Pages: 111-119

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cell palpationwith an optically trapped particle2012

    • Author(s)
      Tadao Sugiura, H. Miyoshi, T. Nishio and A. Honda
    • Journal Title

      Journal of Micro-Nano Mechatronics

      Volume: 7(4) Pages: 131-136

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cardiovascular Vessel Modeling of Congenital Heart Disease Based on Neonatal Echocardiographic Images2012

    • Author(s)
      Megumi Nakao, K. Maeda, R. Haraguchi,K. Kurosaki, K. Kagisaki, I. Shiraishi,K. Nakazawa and Kotaro Minato
    • Journal Title

      IEEE Trans. on Information Technology in BioMedicine

      Volume: 16(1) Pages: 70-79

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cell palpation with an optically trapped particle2012

    • Author(s)
      Tadao Sugiura
    • Journal Title

      Journal of Micro-Nano Mechatronics

      Volume: 7 Pages: 131-136

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Background-incorporated Volumetric Model for Patient-Specific Surgical Simulation: A Segmentation-free,Modeling-free Framework2011

    • Author(s)
      K. W. C. Hung, Megumi Nakao, K.Yoshimura and Kotaro Minato
    • Journal Title

      International Journal of Computer Assisted Radiology and Surgery

      Volume: 6(1) Pages: 35-45

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Interactive Bone Drilling using a 2D Pointing Device to Support Microendoscopic Discectomy Planning2010

    • Author(s)
      Megumi Nakao, R. Kitamura, Tetsuo Sato and Kotaro Minato
    • Journal Title

      IEEE Trans. on Haptics

      Volume: 3(4) Pages: 292-296

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Interactive Bone Drilling using a 2D Pointing Device to Support Microendoscopic Discectomy Planning2010

    • Author(s)
      K. Imanishi, Megumi Nakao, M. Kioka,M. Mori, M. Yoshida, T. Takahashi and Kotaro Minato
    • Journal Title

      International Journal of Computer Assisted Radiology and Surgery

      Volume: 5(5) Pages: 461-469

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Physics-based Interactive Volume Manipulation for Sharing Surgical Process2010

    • Author(s)
      Megumi Nakao and Kotaro Minato
    • Journal Title

      IEEE Trans. on Information Technology in Biomedicine

      Volume: 14(3) Pages: 809-816

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Presentation] Synchronized Visualization of Bone Cutting to Support Microendoscopic Discectomy2012

    • Author(s)
      Megumi Nakao, K. Imanishi, M. Kioka,M. Yoshida, Kotaro Minato and T.Matsuda
    • Organizer
      19th International Display Workshop
    • Place of Presentation
      Kyoto
    • Year and Date
      2012-12-06
    • Related Report
      2012 Final Research Report
  • [Presentation] Axial particle displacement using optical tweezers2012

    • Author(s)
      Mary-Clare Dy, Tadao Sugiura and Kotaro Minato
    • Organizer
      第73回応用物理学会学術講演会講演予稿集
    • Place of Presentation
      愛媛大学
    • Year and Date
      2012-09-14
    • Related Report
      2012 Final Research Report
  • [Presentation] 新生児エコー画像に基づく先天性心疾患の形状モデル構築支援システム2012

    • Author(s)
      益田 祐次, 原口 亮, 中尾 恵, 黒嵜 健一, 白石 公, 中沢 一雄, 鍵崎 康治, 湊 小太郎
    • Organizer
      第51回生体医工学会大会抄録集
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2012-05-11
    • Related Report
      2012 Final Research Report
  • [Presentation] 三次元画像診断支援を目的としたすりガラス状陰影のボリューム可視化法2012

    • Author(s)
      加村 翔平, 中尾 恵, 今西 勁峰,湊 小太郎
    • Organizer
      電子情報通信学会技術研究報告
    • Place of Presentation
      那覇市ぶんかテンブス館
    • Year and Date
      2012-01-19
    • Related Report
      2012 Final Research Report
  • [Presentation] 三次元画像診断支援を目的としたすりガラス状陰影のボリューム可視化法2012

    • Author(s)
      加村翔平
    • Organizer
      電子情報通信学会医用画像研究会(MI)
    • Place of Presentation
      沖縄県那覇市ぶんかテンブス館
    • Year and Date
      2012-01-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] 特徴量空間を用いた二光子顕微鏡画像のボリューム可視化2012

    • Author(s)
      紅林 広亮, 中尾 恵, 杉浦 忠男,佐藤 哲大, 澤田 和明, 川上 良介,根本 知己, 湊 小太郎
    • Organizer
      生体医工学シンポジウム2012 講演予稿集
    • Place of Presentation
      大阪大学基礎工学部
    • Related Report
      2012 Final Research Report
  • [Presentation] 新生児心エコー画像に基づく先天性心疾患の3 次元モデル構築支援システム2012

    • Author(s)
      益田 祐次, 原口 亮, 中尾 恵, 岩田 倫明, 黒崎 健一, 鍵崎 泰治,中沢 一雄, 湊 小太郎
    • Organizer
      生体医工学シンポジウム2012 講演予稿集
    • Place of Presentation
      大阪大学基礎工学部
    • Related Report
      2012 Final Research Report
  • [Presentation] 特徴量空間を用いた二光子顕微鏡画像のボリューム可視化2012

    • Author(s)
      紅林 広亮
    • Organizer
      生体医工学シンポジウム2012
    • Place of Presentation
      大阪大学基礎工学部
    • Related Report
      2012 Annual Research Report
  • [Presentation] 新生児心エコー画像に基づく先天性心疾患の3次元モデル構築支援システム2012

    • Author(s)
      益田 祐次
    • Organizer
      生体医工学シンポジウム2012
    • Place of Presentation
      大阪大学基礎工学部
    • Related Report
      2012 Annual Research Report
  • [Presentation] 高感度二光子顕微鏡イメージング2011

    • Author(s)
      井元 兼太郎, 杉浦 忠男, 湊 小太郎
    • Organizer
      Optics Photonics Japan 2011
    • Place of Presentation
      大阪大学
    • Year and Date
      2011-11-30
    • Related Report
      2012 Final Research Report
  • [Presentation] 高感度二光子顕微鏡イメージング2011

    • Author(s)
      井元兼太郎
    • Organizer
      Optics Photonics Japan 2011
    • Place of Presentation
      大阪大学コンベンションセンター・体育館
    • Year and Date
      2011-11-30
    • Related Report
      2011 Annual Research Report
  • [Presentation] Direct Volume Manipulation for Navigating Lever Resection2011

    • Author(s)
      Y. Oda, Megumi Nakao, K.Imanishi, K.Taura and Kotaro Minato
    • Organizer
      Int. Conf.Artificial Reality and Tele-existence
    • Place of Presentation
      大阪大学
    • Year and Date
      2011-11-29
    • Related Report
      2012 Final Research Report
  • [Presentation] Direct Volume Manipulation for Navigating Liver Resection2011

    • Author(s)
      小田裕也
    • Organizer
      ICAT 2011 (International Conference on Artificial Reality and Telexistence)
    • Place of Presentation
      大阪大学基礎工学部国際棟シグマホール
    • Year and Date
      2011-11-29
    • Related Report
      2011 Annual Research Report
  • [Presentation] 局所構造の大きさに基づくボリューム探索2011

    • Author(s)
      衛藤 聖, 中尾 恵, 杉浦 忠男, 湊小太郎
    • Organizer
      メディカルイメージング連合フォーラム 電子情報通信学会信学技法
    • Place of Presentation
      那覇市ぶんかテンブス館
    • Year and Date
      2011-01-20
    • Related Report
      2012 Final Research Report
  • [Presentation] 局所構造の大きさに基づくボリューム探索2011

    • Author(s)
      衛藤聖
    • Organizer
      電子情報通信学会 医用画像研究会(MI)
    • Place of Presentation
      那覇市ぶんかテンブス館(沖縄)
    • Year and Date
      2011-01-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] 医用グラフィクスアプリケーション開発におけるGPU の活用事例2010

    • Author(s)
      中尾 恵
    • Organizer
      第3回GPU コンピューティングセミナー
    • Place of Presentation
      梅田センタービル
    • Year and Date
      2010-09-16
    • Related Report
      2012 Final Research Report
  • [Presentation] 医用グラフィクスアプリケーション開発におけるGPUの活用事例2010

    • Author(s)
      中尾恵
    • Organizer
      第3回GPUコンピューティングセミナー
    • Place of Presentation
      梅田センタービル(大阪)
    • Year and Date
      2010-09-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Direct Medical Image Deformation2010

    • Author(s)
      Megumi Nakao and Kotaro Minato
    • Organizer
      第49回日本生体医工学会大会
    • Place of Presentation
      大阪国際交流センター
    • Year and Date
      2010-06-25
    • Related Report
      2012 Final Research Report
  • [Presentation] 脈管の太さを指標としたボリューム可視化法の提案2010

    • Author(s)
      衛藤 聖, 中尾 恵, 杉浦 忠男, 湊小太郎
    • Organizer
      第49回日本生体医工学会大会
    • Place of Presentation
      大阪国際交流センター
    • Year and Date
      2010-06-25
    • Related Report
      2012 Final Research Report
  • [Presentation] 脈管の太さを指標としたボリューム可視化法の提案2010

    • Author(s)
      衛藤聖
    • Organizer
      第49生体医工学会大会
    • Place of Presentation
      大阪国際交流センター(大阪)
    • Year and Date
      2010-06-25
    • Related Report
      2010 Annual Research Report
  • [Presentation] Direct Medical Image Deformation2010

    • Author(s)
      中尾恵
    • Organizer
      第49生体医工学会大会
    • Place of Presentation
      大阪国際交流センター(大阪)
    • Year and Date
      2010-06-25
    • Related Report
      2010 Annual Research Report
  • [Presentation] Synchronized Visualization of Bone Cutting to Support Microendoscopic Discectomy

    • Author(s)
      Megumi Nakao
    • Organizer
      19th International Display Workshop
    • Place of Presentation
      Kyoto International Conference Center, Kyoto
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 新生児エコー画像に基づく先天性心疾患の形状モデル構築支援システム

    • Author(s)
      益田 祐次
    • Organizer
      第51回日本生体医工学会大会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] Axial particle displacement using optical tweezers

    • Author(s)
      Mary-Clare Dy
    • Organizer
      第73回応用物理学会学術講演会
    • Place of Presentation
      愛媛大学
    • Related Report
      2012 Annual Research Report
  • [Book] MRI による神経束の可視化-トラクトグラフィ作成法を中心として2012

    • Author(s)
      佐藤 哲大, 湊 小太郎
    • Publisher
      実践医用画像解析ハンドブック
    • Related Report
      2012 Final Research Report
  • [Book] Biomedical Engineering and Cognitive Neuroscience for Healthcare:Interdisciplinary Applications2012

    • Author(s)
      佐藤 哲大 and 湊 小太郎
    • Publisher
      Differences in Analysis Methods of the Human Uncinate Fasciculus Using Diffusion Tensor MRI
    • Related Report
      2012 Final Research Report
  • [Book] 筋肉2012

    • Author(s)
      佐藤 哲大
    • Publisher
      医用画像工学ハンドブック
    • Related Report
      2012 Final Research Report
  • [Book] 実践医用画像解析ハンドブック2012

    • Author(s)
      佐藤 哲大
    • Publisher
      オーム社
    • Related Report
      2012 Annual Research Report
  • [Book] Biomedical Engineering and Cognitive Neuroscience for Healthcare: Interdisciplinary Applications2012

    • Author(s)
      Tetsuo Sato
    • Publisher
      IGI Grobal
    • Related Report
      2012 Annual Research Report
  • [Book] 医用画像工学ハンドブック2012

    • Author(s)
      佐藤 哲大
    • Publisher
      日本医用画像工学会
    • Related Report
      2012 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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