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Alteration of gene expression networks with a rice transposon mPing

Research Project

Project/Area Number 22380006
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionKyoto University

Principal Investigator

YUTAKA Okumoto  京都大学, (連合)農学研究科(研究院), 教授 (90152438)

Co-Investigator(Kenkyū-buntansha) TERAISHI Masayoshi  京都大学, 大学院・農学研究科, 講師 (80378819)
TSUKIYAMA Takuji  京都大学, 大学院・農学研究科, 助教 (00423004)
SAITO Hiroki  京都大学, 大学院・農学研究科 (10536238)
Project Period (FY) 2010-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥18,850,000 (Direct Cost: ¥14,500,000、Indirect Cost: ¥4,350,000)
Fiscal Year 2013: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2012: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2011: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2010: ¥8,320,000 (Direct Cost: ¥6,400,000、Indirect Cost: ¥1,920,000)
Keywordsトランスポゾン / イネ / 遺伝子発現 / ストレス応答 / 転移因子 / ストレス耐性 / ゲノム改変
Research Abstract

The rice transposon mPing is expected as a genetic tool to create genes showing
novel expression profiles since the mPing insertions render adjacent genes stress inducible. In this study, we first established the screening system for mutant genes harboring de novo mPing insertion into the upstream region. Then, we evaluated the effect of the mPing insertion on the expression profiles of stress-response genes. Furthermore, we investigated the methylation degree of promoter region of stress-response genes harboring the mPing insertion. It was found that mPing could confer various expression profiles to stress-response genes independent of DNA methylation.

Report

(5 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (14 results)

All 2013 2012 2011 2010

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (13 results) (of which Invited: 1 results)

  • [Journal Article] Utilization of transposable element mPing as a novel genetic tool for modification of the stress response in rice. Mol2013

    • Author(s)
      Yasuda K, Ito M, Sugita T, Tsukiyama T, Saito H, Naito K, Teraishi M, Tanisaka T, Okumoto Y
    • Journal Title

      Breed

      Volume: 32 Issue: 3 Pages: 505-516

    • DOI

      10.1007/s11032-013-9885-1

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Presentation] Utilization of active MITE mPing as a novel genetic tool for modification of stress response in rice2013

    • Author(s)
      Yasuda K
    • Organizer
      7th International Rice Genetics Symposium
    • Place of Presentation
      Manila, Philippines
    • Year and Date
      2013-11-09
    • Related Report
      2013 Final Research Report
  • [Presentation] イネ転移因子mPing 挿入(STAmP)データベースの活用2013

    • Author(s)
      安田加奈子
    • Organizer
      日本育種学会第124回講演会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2013-10-13
    • Related Report
      2013 Final Research Report
  • [Presentation] Utilization of active MITE mPing as a novel genetic tool for modification of stress response in rice2013

    • Author(s)
      Yasuda K., Tsukiyama T., Saito H., Naito K., Teraishi M., Tanisaka T., Okumoto Y.
    • Organizer
      7th International Rice Genetic Symposium
    • Place of Presentation
      Manila
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] イネ転移因子mPing挿入(STAmP)データベースの 活用2013

    • Author(s)
      安田加奈子、築山拓司、齊藤大樹、内藤健、寺石政義、谷坂隆俊、奥本裕
    • Organizer
      日本育種学会第124回講演会
    • Place of Presentation
      鹿児島大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] イネ活性型トランスポゾンmPingを利用した銀坊主の誘発突然変異遺伝子の迅速単離2012

    • Author(s)
      徐銓
    • Organizer
      日本育種学会第122回講演会
    • Place of Presentation
      京都産業大学
    • Year and Date
      2012-09-14
    • Related Report
      2013 Final Research Report
  • [Presentation] イネ転移因子mPing配列内のシス因子がストレス耐性遺伝子の発現に及ぼす影響2012

    • Author(s)
      安田加奈子
    • Organizer
      日本遺伝学会第84回大会
    • Place of Presentation
      九州大学医学部
    • Related Report
      2012 Annual Research Report
  • [Presentation] イネ活性型転移因子mPingを利用したストレス応答性遺伝子の発現改変を目指して2011

    • Author(s)
      安田加奈子
    • Organizer
      日本育種学会第120回講演会
    • Place of Presentation
      福井県立大学
    • Year and Date
      2011-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] イネ転移因子mPing によるHd3a遺伝子の挿入変異体2011

    • Author(s)
      伊藤真
    • Organizer
      日本育種学会第120回講演会
    • Place of Presentation
      福井県立大学
    • Year and Date
      2011-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] イネ活性型転移因子mPingを利用したストレス応答性遺伝子の発現改変を目指して2011

    • Author(s)
      安田加奈子
    • Organizer
      日本育種学会
    • Place of Presentation
      福井県立大学
    • Year and Date
      2011-09-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] イネ転移因子mPingによるHd3a遺伝子の押入変異体2011

    • Author(s)
      伊藤真
    • Organizer
      日本育種学会
    • Place of Presentation
      福井県立大学
    • Year and Date
      2011-09-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] mPingはなぜ転移するのか?-エピジェネティクな制御機構から逸脱したイネ転移因子Pingの影響2011

    • Author(s)
      門田有希・内藤健・SR Wessler・奥本裕
    • Organizer
      第52回日本植物生理学会
    • Place of Presentation
      東北大学川内北キャンパス
    • Year and Date
      2011-03-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] mPingはなぜ転移するのか?エピジェネティックな制御機構から逸脱したイネ転移因子Pingの影響2010

    • Author(s)
      門田有希・内藤健・T.Chen・SR Wessler・奥本裕
    • Organizer
      日本育種学会 第118回講演会
    • Place of Presentation
      秋田県立大学
    • Year and Date
      2010-09-24
    • Related Report
      2010 Annual Research Report
  • [Presentation] DNAメチル化がイネ非自律性転移因子mPingの転移に与える効果2010

    • Author(s)
      森奈々子・築山拓司・寺石政義・奥本裕・谷坂隆俊
    • Organizer
      日本育種学会 第118回講演会
    • Place of Presentation
      秋田県立大学
    • Year and Date
      2010-09-24
    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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