Comprehensive search of adaptive genes relating to phenology in the Japanese oak

• Project/Area Number: 22380086
• Research Category: Grant-in-Aid for Scientific Research (B)
• Allocation Type: Single-year Grants
• Section: 一般
• Research Field: Forest science
• Research Institution: Ehime University
• Principal Investigator: HARADA Ko 愛媛大学, 農学部, 教授 (40150396)
• Co-Investigator(Kenkyū-buntansha): KOIKE Takayoshi 北海道大学, 大学院・農学研究院, 教授 (10270919)
• Co-Investigator(Renkei-kenkyūsha): SAITO Hideuki 北海道大学, 大学院・農学研究院, 講師 (70312395) ; KADOMATSU Akihiko 北海道大学, 北方生物圏フィールド科学セ ンター, 准教授 (60158847)
• Project Period (FY): 2010 – 2012
• Project Status: Completed (Fiscal Year 2012)
• Budget Amount: ¥18,850,000 (Direct Cost: ¥14,500,000、Indirect Cost: ¥4,350,000); Fiscal Year 2012: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000); Fiscal Year 2011: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000); Fiscal Year 2010: ¥8,840,000 (Direct Cost: ¥6,800,000、Indirect Cost: ¥2,040,000)
• Keywords: ミズナラ / フェノロジー / フィトクロム / 環境変動 / 遺伝子 / 適応 / オゾン濃度 / フィトクーム / 環境応答 / RT-PCR / 葉緑体DNA / ハプロタイプ / CO2濃度 / フィトクローム遺伝子 / 自然選択 / 適応的遺伝子 / 産地試験 / 窒素沈着 / 被食防御

Research Abstract

The Japanese oak (Quercus crispula Blume) broadly distributes on the Japanese archipelago and clear genetic structure, which has been derived from genetic differentiation at the glacial refugia populations, has been revealed by chloroplast DNA analysis. We examined phonological changes for the transplanted materials collected from six populations covering broad area of Japan and tested the operation of natural selection for several candidate genes by molecular population genetic methods.

Research Products

• [Journal Article] Phylogeography of Quercus phillyraeoides(Fagacea) in Japan as revealed by chloroplast DNA variation. (2013)
  • Author(s): Liu, H.Z., Takeichi, Y., Kamiya, K. and Harada, K.
  • Journal Title: J. Forest Res Volume: 18 (4)(in press)
  • NAID: 10031195251
  • Peer Reviewed
• [Journal Article] Geographic distribution and origin of the chloroplast T/C-type in Quecus mongolica var.crispulain northeastern Japan. (2013)
  • Author(s): Liu, H.Z., Harada, K
  • Journal Title: Plant Species Biology Volume: (in press)
  • Peer Reviewed
• [Journal Article] Photosynthetic traits of Siebold's beech and oak saplings grown under free air ozone exposure in northern Japan. (2013)
  • Author(s): Watanabe, M., Hoshika, Y., Inada, N., Wang XN, Mao, QZ. and Koike, T.
  • Journal Title: Environmental Pollution. Volume: 174 Pages: 50-56
  • NAID: 120005068880
  • Peer Reviewed
• [Journal Article] Phylogeography of Quercus phillyraeoides (Fagaceae) in Japan as revealed by chloroplast DNA variation (2013)
  • Author(s): Liu HZ
  • Journal Title: Journal of Forest Research Volume: * Issue: 4 Pages: 361-370
  • DOI: 10.1007/s10310-012-0357-y
  • Peer Reviewed
• [Journal Article] Gerographic distribution and origin of the chloroplast T/C-type in Quercus mongolica var. crispula in northeastern Japan (2013)
  • Author(s): Liu HZ
  • Journal Title: Plant Species Biology Volume: *
  • Peer Reviewed
• [Journal Article] Photosynthetic traits of Siebold's beech and oak saplings grown under free air ozone exposure in northern Japan. Environmental Pollution (2013)
  • Author(s): Watanabe M
  • Journal Title: Environmental Pollution Volume: 274 Pages: 50-56
  • Peer Reviewed
• [Journal Article] Leaves of Japanese oak (Quercus mongolicavar. crispula) mitigate photoinhibition by adjusting electron transport capacities and thermal energy dissipation along the intra-canopy light gradient. (2012)
  • Author(s): Kitao, M., Kitaoka, S., Komatsu, M., Utsugi, H., Tobita, H., Koike, T. and Maruyama, Y.
  • Journal Title: Physiologia Plantarum. Volume: 146 Pages: 192-204
  • Peer Reviewed
• [Journal Article] 樹木が放出する炭素化合物ガスの役割 -テルペン類に注目して- (2012)
  • Author(s): 川口光倫・渡辺 誠・小池 孝良
  • Journal Title: 北方林業 Volume: 64 Pages: 173-176
  • NAID: 40019352725
  • Peer Reviewed
• [Journal Article] 木本植物のフロリゲンをコードする遺伝子の発現調節に関する研究動向 (2012)
  • Author(s): 小倉俊治・斎藤秀之
  • Journal Title: 北海道の林木育種 Volume: 55(1) Pages: 23-29
  • NAID: 40019540762
  • Peer Reviewed
• [Journal Article] 北限ブナ林の保存と迫る病虫害 (2012)
  • Author(s): 小池孝良
  • Journal Title: 北方林業 Volume: 64 Pages: 52-55
  • NAID: 40019196144
  • Peer Reviewed
• [Journal Article] ブナのDNAマイクロアレイの開発 (2011)
  • Author(s): 斎藤秀之・瀬々 潤・清水(稲継) 理恵・神村章子・山田 宰靖・清水 健太郎
  • Journal Title: 北海道の林木育種 Volume: 54(2) Pages: 11-14
  • NAID: 40019244788
  • Peer Reviewed
• [Journal Article] メチオニンシンターゼ遺伝子(MetE)を用いた日本列島のミズナラの分子集団遺伝学的研究 (2011)
  • Author(s): 原田光・池田創作
  • Journal Title: 林木の育種 Volume: 241 Pages: 1-11
  • NAID: 40019039137
  • Peer Reviewed
• [Journal Article] 北海道の森林を対象にしたオゾン影響解明の展望 (2011)
  • Author(s): 小池孝良, 毛巧芝, 渡辺誠, 稲田直輝, 川口光倫, 星加康智
  • Journal Title: 北海道の農業気象 Volume: 63 Pages: 17-23
  • Peer Reviewed
• [Journal Article] Morphological and physiological responses of Siebold's beech (Fagus crenata) seedlings grown under CO_2 concentrations ranging from pre-industrial to expected future levels. (2011)
  • Author(s): Hirano, A.Hongo I. Koike, T.
  • Journal Title: Landscape and Ecological Engineering Volume: 7
  • Peer Reviewed
• [Journal Article] Plants defense characteristics and hypothesis (2010)
  • Author(s): Novriyanti, E., Aoyama, C., Watanabe, M., Koike, T.
  • Journal Title: Eurasian Journal of Forest Research Volume: 13 Pages: 77-85
  • Peer Reviewed
• [Journal Article] Induced defense of leaves of Japanese white birch seedlings grazed by Gypsy moth larvae. (2010)
  • Author(s): Aoyama, C., Novriyanti, E., Koike, T
  • Journal Title: Eurasian Journal of Forest Research Volume: 13 Pages: 49-55
  • Peer Reviewed
• [Presentation] ブナとミズナラを対象としたオゾンの光合成への影響-光環境とオゾン影響の関係- (2013)
  • Author(s): 稲田直輝, 星加康智, 渡辺 誠, 毛 巧芝, 小池孝良
  • Organizer: 第124回日本森林学会大会
  • Place of Presentation: 岩手県盛岡市
• [Presentation] ブナの葉の高温ストレス前歴を指標する発現遺伝子のゲノム網羅的解析 (2013)
  • Author(s): 斎藤秀之, 神村章子, 瀬々 潤, 清水(稲継)理恵, 清水健太郎
  • Organizer: 第124回日本森林学会大会
  • Place of Presentation: 岩手大学(盛岡市)
• [Presentation] ブナの花芽分化と花成遺伝子群の発現調節 (2012)
  • Author(s): 斎藤秀之, 小倉俊治, 門松昌彦
  • Organizer: 第61回北方森林学会
  • Place of Presentation: 札幌コンベンションセンター, 札幌市
  • Year and Date: 2012-11-13
• [Presentation] Photosynthetic responses of Siebold's beech and oak saplings grown in northern Japan to free air ozone exposure. (2012)
  • Author(s): Watanabe, M., Hoshika, Y., Inada, N., Wang, X., Mao, Q. and Koike, T
  • Organizer: Aerosols in East Asia and Their Impacts on Plants and Human Health
  • Place of Presentation: Koganei, Japan.
• [Presentation] Genetic variations and genetic differentiation of Quercus phillyraeoides (Fagaceae) in Japan revealed by chloroplast DNA variation and microsatellite markers. (2012)
  • Author(s): Liu, H.Z. and Harada, K
  • Organizer: Plants 2012 International Conference on Advances in Plant Scineces
  • Place of Presentation: Chiang Mai, Thailand.
• [Presentation] Genetic variations and genetic structure of Quercus phillyraeoidesin Japan revealed by chloroplast DNA variation and microsatellite markers (2012)
  • Author(s): Harada, K. and Liu H.Z
  • Organizer: IUFRO 2012 Genetics of Fagus and Nothofagus.
  • Place of Presentation: Bordaux, France.
• [Presentation] Genetic variations and genetic differentiation of Quercus phillyraeoides (Fagaceae) in Japan revealed by chloroplast DNA variation and microsatellite markers. (2012)
  • Author(s): Liu, H.Z. and Harada, K
  • Organizer: 日本遺伝学会第84回大会
  • Place of Presentation: 九州大学
• [Presentation] 高CO2に対するミズナラ萌芽の光合成・成長応答およびうどんこ病発現 (2012)
  • Author(s): 渡辺 誠, 北岡 哲, 江口則和, 渡邊陽子, 里村多香美, 高木健太郎, 佐藤冬樹, 小池孝良
  • Organizer: 第53回大気環境学会年会
  • Place of Presentation: 神奈川県横浜市.
• [Presentation] Photosynthetic traits of Fagus crenata and Quercus crispula sapling grown under free air ozone exposure. (2012)
  • Author(s): Watanabe, M., Hoshika, Y., Inada, N., Wang, X., Mao, Q. and Koike, T
  • Organizer: International Conference 'Biological Reactions of Forests to Climate Change and Air Pollution'
  • Place of Presentation: Kaunas, Lithuania
• [Presentation] 土壌水分変動がブナ苗木の葉の遺伝子発現に与える影響のゲノム網羅的解析 (2012)
  • Author(s): 斎藤秀之, 石堂 光, 神村章子, 瀬々潤, 清水(稲継)理恵, 清水健太郎
  • Organizer: 第123回日本森林学会大会
  • Place of Presentation: 宇都宮大学,宇都宮市
• [Presentation] Genetic structure analysis of Quercus phillyraeoides (Fagaceae) in the Japanese archipelago revealedby cpDNA variation and microsatellite (2012)
  • Author(s): Liu HZ
  • Organizer: 日本遺伝学会第84回大会
  • Place of Presentation: 九州大学医学部
• [Presentation] GENETIC VARIATIONS AND GENETIC STRUCTURE OF QERCUS PHILLYRAEOIDES IN JAPAN REVEALED BY CHLOROPLAST DNA VARIATION AND MICROSATELLITE MARKERS (2012)
  • Author(s): Harada K
  • Organizer: IUFRO Fagaceae Genetics 2012
  • Place of Presentation: Bordaux, France
• [Presentation] Genetic variations and genetic differentiation of Quercus phillyraeoides (Fagaceae) in Japan revealed by chloroplast DNA variation and microsatellite markers (2012)
  • Author(s): Liu HZ
  • Organizer: International conference of Advances in Plant Sciences (ICAPS 2012)
  • Place of Presentation: Chiang Mai, Thailand
• [Presentation] ブナ, ミズナラ幼樹における処理2年目の誘導防御の経時変化 (2010)
  • Author(s): 青山千穂・小池孝良
  • Organizer: 日本森林学会北海道支部第59回大会
  • Place of Presentation: 札幌コンベンションセンター
  • Year and Date: 2010-11-09
• [Presentation] ミズナラの光受容体タンパク質フィトクロム遺伝子クローニング (2010)
  • Author(s): 三好健太・原田光
  • Organizer: 日本遺伝学会第82回大会
  • Place of Presentation: 北海道大学高等機能開発総合センター
  • Year and Date: 2010-09-20
• [Presentation] ミズナラの光受容体タンパク質フィトクロムの遺伝子クローニング (2010)
  • Author(s): 三好健太・原田光
  • Organizer: 日本遺伝学会第82回大会
  • Place of Presentation: 北海道大学
• [Presentation] Genetic variation of Japanese beech (Fagus crenataBlume) in Shikoku island (2010)
  • Author(s): Hashimoto, R., Kai, C. and Harada, K.
  • Organizer: XXIII IUFRO World Congress
  • Place of Presentation: Soeul, Korea
• [Book] 「森林遺伝育種学」第2章遺伝学の基本 (2012)
  • Author(s): 原田光
  • Publisher: 文永堂
• [Book] 森林遺伝育種学 (2012)
  • Author(s): 井出雄二
  • Total Pages: 296
  • Publisher: 文永堂
• [Book] 北海道の樹木の来た道,北海道の樹木(北方森林学会編) (2011)
  • Author(s): 斎藤秀之
  • Publisher: 北海道新聞