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Crystallization of GPCR and its specific antibody

Research Project

Project/Area Number 22590270
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General medical chemistry
Research InstitutionKyoto University

Principal Investigator

ASADA Hidetsugu  京都大学, 大学院・医学研究科, 特定助教 (20399041)

Co-Investigator(Kenkyū-buntansha) SHIROISHI Mitsunori  九州大学, 大学院・薬学研究科, 助教 (00380527)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2012: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2011: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2010: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords構造生物 / GPCR / 抗体 / 結晶化 / X線結晶構造解析 / 共結晶 / 構造解析
Research Abstract

Angiotensin II receptor type2 (AT2) play an importantrole for regulating blood pressure. Recent studies strongly suggest that AT2 not only mediates blood pressure control but also plays an important role in cardiovascular protection such as anti cardiac hypertrophy. To solve AT2 structure is important for understanding of the molecular mechanism of blood pressure control and developing of drug against cardiac hypertrophy. Recently, several GPCR structures have been solved. However, to determine of GPCR crystal structure still remains having some problems. In this study, we developed AT2 structure specific recognition antibodies to overcome these problems. We have been trying to crystallize of AT2 with Fab in order to solve the structure in this study. Stabilized AT2 mutant (AT2-T4L) has been constructed by deletion of the flexible N- and C-terminus and insertion of T4 lysozyme (T4L) to the third intracellular loop (i3). AT2-T4L has been expressed in Sf9 insect cells. The expression lev … More els of AT2-T4L have been assessed by flow cytometric analysis (FACS) and specific ligand-binding assay. We have purified from the cell membrane expressing AT2-T4L using TALON resin and size exclusion chromatography (SEC). The characteristics of the purified receptors have been assessed by thermal stability (CPM) assay. The antibodies have been developed from immunization of mice with wild type AT2. The antibodies have been screened using liposome-ELISA, dot plot analysis, FACS, and fluorescence size exclusion chromatography (FSEC). We have prepared Fab region from the screened antibodies for crystallization. The purified AT2T4L has been incubated with its Fab. Then, the complex has been purified by means of SEC. The complex has been crystallized in vapordiffusion. The AT2-T4L could be expressed and purified successfully. The expression level was 57.3±8.9% (Average±SD) of whole infected cells (FACS) and 91.7±37.8pmol/mg -membrane (ligand-binding assay). The thermal stability of AT2-T4L had melting temperature (Tm) of 34 and 58℃. This data show that thermal stability of AT2-T4L is not enough for crystallization. Actually, we could not acquire the crystals from this sample in LCP. To contribute improvement of AT2-T4L stability, we have established three AT2 specific antibodies via the screening steps. The complex of AT2-T4L and Fab had Tm of 62℃. This thermal stability was higher than AT2-T4L. Furthermore, the thermal stability of complex was maintained for a week at 4℃. These data strongly suggested the complex is more suitable for crystallization. The complex was crystallized in vapor diffusion. We acquired some crystals of complex but their resolution had very low at the present study. So, we have been trying to crystallization in vapor diffusion and LCP under the various conditions. Less

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (18 results)

All 2012 2011 2010

All Journal Article (15 results) (of which Peer Reviewed: 5 results) Presentation (3 results)

  • [Journal Article] Structure of the human M2 muscarinic acetylcholine receptor bound to an antagonist2012

    • Author(s)
      Haga, K*., A. C. Kruse*,H. Asada*, T. Yurugi-Kobayashi, M. Shiroishi, C. Zhang, W. I. Weis, T. Okada, B. K. Kobilka, T. Haga, and T. Kobayashi
    • Journal Title

      These authors contributed equally to this work

      Volume: 482 Pages: 547-551

    • NAID

      120003752107

    • Related Report
      2012 Final Research Report
  • [Journal Article] Platform for the rapid construction and evaluation of GPCRs for crystallography in Saccharoroyces cerevisiae.2012

    • Author(s)
      Shiroishi M., et al.
    • Journal Title

      Micorb, Cell Fact.

      Volume: 11 Issue: 1 Pages: 78-78

    • DOI

      10.1186/1475-2859-11-78

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structure of the human M2 muscarinic acetylcholine receptor bound to an antagonist2012

    • Author(s)
      Haga K., et al
    • Journal Title

      Nature

      Volume: 482 Issue: 7386 Pages: 547-551

    • DOI

      10.1038/nature10753

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Production of the stable human histamine H1 receptor in Pichia pastoris for structural determination2011

    • Author(s)
      Shiroishi, M, T. Kobayashi, S. Ogasawara, H. Tsujimoto, C. Ikeda-Suno, S. Iwata, T. Shimamura
    • Journal Title

      Methods

      Volume: 55 Pages: 281-286

    • Related Report
      2012 Final Research Report
  • [Journal Article] Crystal structure-based virtual screening for fragment-like ligands of the human histamine H(1) receptor2011

    • Author(s)
      de Graaf C, AJ. Kooistra, HF. Vischer, V. Katritch, M. Kuijer, M. Shiroishi, S. Iwata, T. Shimamura, RC. Stevens, IJ. de Esch, R. Leurs
    • Journal Title

      J Med Chem

      Volume: 54 Pages: 8195-8206

    • Related Report
      2012 Final Research Report
  • [Journal Article] Molecular Basis for Herpesvirus Entry Mediator Recognition by the Human Immune Inhibitory Receptor CD160 and Its Relationship to the Cosignaling Molecules BTLA and LIGHT2011

    • Author(s)
      Kojima R, M. Kajikawa, M. Shiroishi, K. Kuroki, K. Maenaka
    • Journal Title

      J Mol Biol

      Volume: 413 Pages: 762-772

    • NAID

      120003660598

    • Related Report
      2012 Final Research Report
  • [Journal Article] Structure of the human histamine H(1) receptor complex with doxepin, These authors contributed equally to this work2011

    • Author(s)
      Shimamura T*, M. Shiroishi *, S. Weyand, H. Tsujimoto, G. Winter, V. Katritch, R. Abagyan, V. Cherezov, W. Liu, GW. Han, T. Kobayashi, RC. Stevens, S. Iwata
    • Journal Title

      Nature

      Volume: 475 Pages: 65-70

    • Related Report
      2012 Final Research Report
  • [Journal Article] Cloning, expression and purification of the anion exchanger 1 homologue from the basidiomycete Phanerochaete chrysosporium2011

    • Author(s)
      Tokuda, N., K. Igarashi, T. Shimamura, T. Yurugi-Kobayashi, M. Shiroishi, K. Ito, T. Sugawara, H. Asada, T. Murata, N. Nomura, S. Iwata, and T. Kobayashi
    • Journal Title

      Protein Expr Purif

      Volume: 79 Pages: 81-87

    • NAID

      120003255719

    • Related Report
      2012 Final Research Report
  • [Journal Article] Cysteine-to-serine shuffling using a Saccharomyces cerevisiae expression system improves protein secretion: case of a nonglycosylated mutant of miraculin, a taste-modifying protein2011

    • Author(s)
      Ito, K., T. Sugawara, A. Koizumi, K.Nakajima, A. Shimizu-Ibuka, M. Shiroishi, H. Asada, T. Yurugi-Kobayashi, T. Shimamura, T. Asakura, T. Misaka, S. Iwata, T. Kobayashi, and K. Abe
    • Journal Title

      Biotechnol Lett

      Volume: 33 Pages: 103-107

    • NAID

      120002723145

    • Related Report
      2012 Final Research Report
  • [Journal Article] Evaluation of the Pichia pastoris expression system for the production of GPCRs for structural analysis2011

    • Author(s)
      Asada, H., T. Uemura, T. Yurugi-Kobayashi, M. Shiroishi, T. Shimamura, H. Tsujimoto, K. Ito, T. Sugawara, T. Nakane, N. Nomura, T. Murata, T. Haga, S. Iwata, and T. Kobayashi
    • Journal Title

      Microb Cell Fact

      Volume: 10 Pages: 24-24

    • Related Report
      2012 Final Research Report
  • [Journal Article] Cloning, expression and purification of the anion exchanger 1 homologue from the basidiomycete Phanerochaete chrysosporium2011

    • Author(s)
      Tokuda N, Igarashi K, Shimamura T(co-1st author), Yurugi-Kobayashi T, Shiroishi M, Ito K, Sugawara T, Asada H, Murata T, Nomura N, Iwata S, Kobayashi T.
    • Journal Title

      Protein. Expr. Purif.

      Volume: 79(1) Issue: 1 Pages: 81-7

    • DOI

      10.1016/j.pep.2011.04.006

    • NAID

      120003255719

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cysteine-to-serine shuffling using a Saccharomyces cerevisiae expression system improves protein secretion : case of a nonglycosylated mutant of miraculin, a taste-modifying protein2011

    • Author(s)
      Ito, K., T.Sugawara, A.Koizumi, K.Nakajima, A.Shimizu-Ibuka, M.Shiroishi, H.Asada, T.Yurugi-Kobayashi, T.Shimamura, T.Asakura, T.Misaka, S.Iwata, T.Kobayashi, K.Abe
    • Journal Title

      Biotechnology Letters

      Volume: Vol.33 Issue: 1 Pages: 103-107

    • DOI

      10.1007/s10529-010-0399-1

    • NAID

      120002723145

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evaluation of the Pichia pastoris expression system for the production of GPCRs for structural analysis2011

    • Author(s)
      Asada, H., Uemura, T., Yurugi-Kobayashi, T., Shiroishi, M., Shimamura, T., Tsujimoto, H., Ito, K., Sugawara, T., Nakane, T., Nomura, N., Murata, T., Haga, T., Iwata, S., Kobayashi, T
    • Journal Title

      Microbial Cell Factories

      Volume: 10 Issue: 1 Pages: 24-24

    • DOI

      10.1186/1475-2859-10-24

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Bulky high-mannose-type N-glycan blocks the taste-modifying activity of miraculin2010

    • Author(s)
      Ito, K., T. Sugawara, A. Koizumi, K. Nakajima, A. Shimizu-Ibuka, M. Shiroishi, H. Asada, T. Yurugi-Kobayashi, T. Shimamura, T. Asakura, K. Masuda, M. Ishiguro, T. Misaka, S. Iwata, T. Kobayashi, and K. Abe
    • Journal Title

      Biochim Biophys Acta

      Volume: 1800 Pages: 986-992

    • Related Report
      2012 Final Research Report
  • [Journal Article] Contribution of asparagine residues to the stabilization of a proteinaceous antigen-antibody complex, HyHEL-10-hen egg white lysozyme2010

    • Author(s)
      Yokota A, K. Tsumoto, M. Shiroishi, T. Nakanishi, H. Kondo, I. Kumagai
    • Journal Title

      J Biol Chem

      Volume: 285 Pages: 7686-96

    • Related Report
      2012 Final Research Report
  • [Presentation] The expression and purification of Angiotensin II receptor type 2 toward crystal structural biology2011

    • Author(s)
      浅田秀基
    • Organizer
      GPCR workshop 2011
    • Place of Presentation
      Hyatt Regency Maui Resort & Spa (Hawaii, USA)
    • Year and Date
      2011-12-05
    • Related Report
      2011 Annual Research Report
  • [Presentation] アンジオテンシンタイプ2受容体の発現・精製から結晶構造解析へ向けて(Expression and purification of angiotensin receptor type 2 for the determination of crystal structure)2011

    • Author(s)
      浅田秀基
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都)
    • Year and Date
      2011-09-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] Expression and purification of Angiotensin receptor type 2 and production of structure recognition antibody for structural biology2010

    • Author(s)
      浅田秀基
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会 合同大会
    • Place of Presentation
      神戸国際会議場(神戸)
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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