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Creation and biological evaluation of nanoparticle-based artificial transcription factor

Research Project

Project/Area Number 22K15249
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 47010:Pharmaceutical chemistry and drug development sciences-related
Research InstitutionKyoto University

Principal Investigator

Chinnathambi Shanmugavel  京都大学, 高等研究院, 特定研究員 (60922341)

Project Period (FY) 2022-04-01 – 2024-03-31
Project Status Completed (Fiscal Year 2023)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2023: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2022: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
KeywordsQuantum dots / Cell imaging / Transcription Factor / Medaka fish / reactive oxygen species / Molecular modeling / NANO-TF / Silica nanoparticles / Mitochondrial factors / Cell Imaging / medaka egg imaging / Carbon quantum dots / Silicon quantum dots / Transcription factor
Outline of Research at the Start

Cancer is the leading cause of death worldwide. Recent studies have revealed the importance of reactive oxygen species produced by mitochondrial complex I in cancer disease and their associated signaling pathways and epigenetic regulation. It is believed that this NANO-TF can control ROS levels and intracellular energy
metabolism in patients with cancer disease and provide innovative strategies for treating cancer.

Outline of Final Research Achievements

We have developed water-soluble SiQDs and CQDs for bio-imaging, as well as to prepare the artificial transcription factor. Instead, we used silicon QDs with decene molecules for surface functionalization and Pluronic F127 for the water-soluble process. Additionally, we synthesized CQDs from biomass waste.We tested the cytotoxicity of both materials on various cell lines, including HeLa, A549, fibroblast, iPS, cardiomyocytes, and Japanese medaka fish. We used these materials to develop NANO-TF. The NANO-TF units contain drugs and mitochondrial penetrating peptides, which enable them to penetrate inside the mitochondria.

Academic Significance and Societal Importance of the Research Achievements

当研究室において合成された量子ドットベースの NANO-TF は、ミトコンドリア膜を透過してがん細胞のミトコンドリア DNA に到達する能力を持っており、得られた結果は、QD ベースの薬物送達による癌細胞の破壊に大きく役立つ。

Report

(3 results)
  • 2023 Annual Research Report   Final Research Report ( PDF )
  • 2022 Research-status Report
  • Research Products

    (25 results)

All 2024 2023 2022 Other

All Int'l Joint Research (7 results) Journal Article (10 results) (of which Int'l Joint Research: 10 results,  Peer Reviewed: 10 results,  Open Access: 7 results) Presentation (8 results) (of which Int'l Joint Research: 3 results,  Invited: 2 results)

  • [Int'l Joint Research] Vellore Institute of Technology Chennai(インド)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] Massachusetts Institute of Technology(オーストラリア)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] RMIT University(米国)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] Universiti Sains Malaysia(マレーシア)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] Vellore Institute of Technology Vellore(インド)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] Vellore Institute of Technology, Chennai(インド)

    • Related Report
      2022 Research-status Report
  • [Int'l Joint Research] University of Science(マレーシア)

    • Related Report
      2022 Research-status Report
  • [Journal Article] An ultra-sensitive detection of Melamine in milk using Rare-earth doped Graphene Quantum Dots- Synthesis and Optical Spectroscopic approach2024

    • Author(s)
      Anjila P.K Fathima、Tharani G.R.、Sundaramoorthy Anand、Kumar Shanmugam Venkat、Subramani Karthikeyan、Chinnathambi Shanmugavel、Pandian Ganesh N.、Raghavan Vimala、Grace Andrews Nirmala、Ganesan Singaravelu、Rajendiran Mangaiyarkarasi
    • Journal Title

      Microchemical Journal

      Volume: 196 Pages: 109670-109670

    • DOI

      10.1016/j.microc.2023.109670

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Chalcone derivatives' interaction with human serum albumin and cyclooxygenase-22024

    • Author(s)
      Karthikeyan Subramani、Thirunarayanan Ayyavu、Shano Leon Bernet、Hemamalini Arasappan、Sundaramoorthy Anandh、Mangaiyarkarasi Rajendiran、Abu Norhidayah、Ganesan Singaravelu、Chinnathambi Shanmugavel、Pandian Ganesh N.
    • Journal Title

      RSC Advances

      Volume: 14 Issue: 4 Pages: 2835-2849

    • DOI

      10.1039/d3ra07438b

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A review on medicinally important heterocyclic compounds and importance of biophysical approach of underlying the insight mechanism in biological environment2023

    • Author(s)
      Karthikeyan Subramani、Grishina Maria、Kandasamy Saravanan、Mangaiyarkarasi Rajendiran、Ramamoorthi Anitha、Chinnathambi Shanmugavel、Pandian Ganesh N.、John Kennedy L.
    • Journal Title

      Journal of Biomolecular Structure and Dynamics

      Volume: 41 Issue: 23 Pages: 14599-14619

    • DOI

      10.1080/07391102.2023.2187640

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Development of biomass waste-based carbon quantum dots and their potential application as non-toxic bioimaging agents2023

    • Author(s)
      Abu Norhidayah、Chinnathambi Shanmugavel、Kumar Mahima、Etezadi Fatemeh、Bakhori Noremylia Mohd、Zubir Zuhana Ahmad、Md Salleh Shahrul Nizam、Shueb Rafidah Hanim、Karthikeyan Subramani、Thangavel Vaijayanthi、Abdullah Jaafar、Pandian Ganesh N.
    • Journal Title

      RSC Advances

      Volume: 13 Issue: 40 Pages: 28230-28249

    • DOI

      10.1039/d3ra05840a

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A biophysical approach of tyrphostin AG879 binding information in: bovine serum albumin, human ErbB2, c-RAF1 kinase, SARS-CoV-2 main protease and angiotensin-converting enzyme 22023

    • Author(s)
      Karthikeyan Subramani、Sundaramoorthy Anandh、Kandasamy Saravanan、Bharanidharan Ganesan、Aruna Prakasarao、Suganya Ramakrishnamurthy、Mangaiyarkarasi Rajendiran、Ganesan Singaravelu、Pandian Ganesh N.、Ramamoorthi Anitha、Chinnathambi Shanmugavel
    • Journal Title

      Journal of Biomolecular Structure and Dynamics

      Volume: 42 Issue: 3 Pages: 1455-1468

    • DOI

      10.1080/07391102.2023.2204368

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Nucleic acid‐based small molecules as targeted transcription therapeutics for immunoregulation2023

    • Author(s)
      Bai Dan、Ziadlou Reihane、Vaijayanthi Thangavel、Karthikeyan Subramani、Chinnathambi Shanmugavel、Parthasarathy Anutthaman、Cai Li、Br?ggen Marie‐Charlotte、Sugiyama Hiroshi、Pandian Ganesh N.
    • Journal Title

      Allergy

      Volume: 79 Issue: 4 Pages: 843-860

    • DOI

      10.1111/all.15959

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Food Intake and Colorectal Cancer2023

    • Author(s)
      Kumar Akshaya、Chinnathambi Shanmugavel、Kumar Magi、Pandian Ganesh N.
    • Journal Title

      Nutrition and Cancer

      Volume: 75 Issue: 9 Pages: 1710-1742

    • DOI

      10.1080/01635581.2023.2242103

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A biophysical approach of cytarabine anticancer drug insights into human serum albumin and checkpoint kinase 12023

    • Author(s)
      Rupavarshini Manoharan、Karthikeyan Subramani、Anandh Sundaramoorthy、Ramamoorthi Anitha、Ramakrishnamurthy Suganya、Bharanidharan Ganesan、Aruna Prakasarao、Mangaiyarkarasi Rajendiran、Chinnathambi Shanmugavel、Pandian Ganesh N.、Ganesan Singaravelu
    • Journal Title

      Results in Chemistry

      Volume: 5 Pages: 100755-100755

    • DOI

      10.1016/j.rechem.2022.100755

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Nano bio interaction between human immunoglobulin G and nontoxic, near-infrared emitting water-borne silicon quantum dot micelles2023

    • Author(s)
      Chinnathambi Shanmugavel、Shirahata Naoto、Kumar Mahima、Karthikeyan Subramani、Abe Katsuhiko、Thangavel Vaijayanthi、Pandian Ganesh N.
    • Journal Title

      RSC Advances

      Volume: 13 Issue: 9 Pages: 6051-6064

    • DOI

      10.1039/d3ra00552f

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Facile Synthesis of Hafnium Oxide Nanoparticle Decorated on Graphene Nanosheet and Its Photocatalytic Degradation of Organic Pollutants under UV-Light Irradiation2022

    • Author(s)
      Jayaraman Venkatachalam、Mahalingam Shanmugam、Chinnathambi Shanmugavel、Pandian Ganesh N.、Prakasarao Aruna、Ganesan Singaravelu、Ramasamy Jayavel、Ayyaru Sivasankaran、Ahn Young-Ho
    • Journal Title

      Applied Sciences

      Volume: 12 Issue: 21 Pages: 11222-11222

    • DOI

      10.3390/app122111222

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Quantum dots for bioimaging and drug delivery applications2023

    • Author(s)
      CHINNATHAMBI Shanmugavel
    • Organizer
      Centre for nanotechnology research, VIT University
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] Quantum dots for biological applications2023

    • Author(s)
      CHINNATHAMBI Shanmugavel
    • Organizer
      RSC Poster conference 2024
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Near infrared-emitting silicon quantum dots interaction with blood plasma proteins2023

    • Author(s)
      CHINNATHAMBI Shanmugavel
    • Organizer
      Kyoto Winter School 2024 “Towards Holistic Understanding of Life,”
    • Related Report
      2023 Annual Research Report
  • [Presentation] Silicon, and carbon quantum dots for in-vitro and in-vivo imaging2023

    • Author(s)
      CHINNATHAMBI Shanmugavel
    • Organizer
      3rd International Conference on Advanced Nanomaterials
    • Related Report
      2023 Annual Research Report
  • [Presentation] Quantum dots for Biomedical Applications2023

    • Author(s)
      CHINNATHAMBI Shanmugavel
    • Organizer
      Global Web Forum Series on Science &Technology
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] Biomass-derived carbon quantum dots as bioimaging agents2023

    • Author(s)
      CHINNATHAMBI Shanmugavel
    • Organizer
      International Conference on Materials Science and Engineering (Materials Oceania 2023)
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Silicon, Carbon dots for in-vitro and in-vivo imaging2023

    • Author(s)
      CHINNATHAMBI Shanmugavel
    • Organizer
      Biomaterials International 2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Multi-functional Transcription Therapeutics for a Mitochondrial Genetic Disorder2022

    • Author(s)
      Chinnathambi,S., Lee,K.B., Sugiyama,H., Ganesh N Pandian
    • Organizer
      iCeMS Retreat, Kyoto University
    • Related Report
      2022 Research-status Report

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Published: 2022-04-19   Modified: 2025-01-30  

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