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O-フタルアルデヒド基を用いたペプチドの高効率マクロ環化とその応用

Research Project

Project/Area Number 22KF0114
Project/Area Number (Other) 22F22334 (2022)
Research Category

Grant-in-Aid for JSPS Fellows

Allocation TypeMulti-year Fund (2023)
Single-year Grants (2022)
Section外国
Review Section Basic Section 37010:Bio-related chemistry
Research InstitutionThe University of Tokyo

Principal Investigator

菅 裕明  東京大学, 大学院理学系研究科(理学部), 教授 (00361668)

Co-Investigator(Kenkyū-buntansha) ZHANG YUE  東京大学, 大学院理学系研究科(理学部), 外国人特別研究員
Project Period (FY) 2023-03-08 – 2025-03-31
Project Status Completed (Fiscal Year 2024)
Budget Amount *help
¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 2024: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2023: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2022: ¥600,000 (Direct Cost: ¥600,000)
KeywordsmRNA display / RaPID / peptide drug discovery / peptide cyclization / OPA
Outline of Research at the Start

We aim to develop OPA-based cyclic peptide libraries using the FIT system. These libraries will selectively release the free reactive moiety after the translation step for peptide cyclization or PTMs, which will be further applied in the RaPID system to identify potential drug molecules. Additionally, we plan to explore a chemoselective peptide cyclization method for post-translational modifications. Through this, we aim to contribute to the development of chemical biology studies and drug discovery efforts, aimed at identifying peptide candidates against various disease-related proteins.

Outline of Annual Research Achievements

We successfully established a thiopeptide/mRNA display platform that enables the de novo discovery of natural product-like thiopeptides with potential bioactivity and high metabolic stability. This powerful selection platform identified a series of thiopeptide candidates with excellent binding affinity and kinase inhibitory activity against a cancer related protein, TNIK. Additionally, the platform was re-engineered to incorporate more nonproteinogenic amino acids, resulting in thiopeptides with significantly improved metabolic stability while maintaining high bioactivity in vitro. These works have been published in J. Am. Chem. Soc., 2024, 146, 12, 8058-8070.; Org. Lett., 2022, 24, 43, 7894-7899.; J. Am. Chem. Soc., 2022, 144 (44), 20332-20341. And we also submitted the patent PCT/JP2023/035472.

Report

(3 results)
  • 2024 Annual Research Report
  • 2023 Research-status Report
  • 2022 Annual Research Report
  • Research Products

    (4 results)

All 2024 2022

All Journal Article (3 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 3 results,  Open Access: 2 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] A Compact Reprogrammed Genetic Code for De Novo Discovery of Proteolytically Stable Thiopeptides2024

    • Author(s)
      Vinogradov Alexander A.、Zhang Yue、Hamada Keisuke、Kobayashi Shunsuke、Ogata Kazuhiro、Sengoku Toru、Goto Yuki、Suga Hiroaki
    • Journal Title

      Journal of the American Chemical Society

      Volume: 146 Issue: 12 Pages: 8058-8070

    • DOI

      10.1021/jacs.3c12037

    • Related Report
      2024 Annual Research Report 2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Solid-Phase-Based Synthesis of Lactazole-Like Thiopeptides2022

    • Author(s)
      Zhang Yue、Vinogradov Alexander A.、Chang Jun Shi、Goto Yuki、Suga Hiroaki
    • Journal Title

      Organic Letters

      Volume: 24 Issue: 43 Pages: 7894-7899

    • DOI

      10.1021/acs.orglett.2c02870

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] De Novo Discovery of Thiopeptide Pseudo-natural Products Acting as Potent and Selective TNIK Kinase Inhibitors2022

    • Author(s)
      Vinogradov Alexander A.、Zhang Yue、Hamada Keisuke、Chang Jun Shi、Okada Chikako、Nishimura Hirotaka、Terasaka Naohiro、Goto Yuki、Ogata Kazuhiro、Sengoku Toru、Onaka Hiroyasu、Suga Hiroaki
    • Journal Title

      Journal of the American Chemical Society

      Volume: 144 Issue: 44 Pages: 20332-20341

    • DOI

      10.1021/jacs.2c07937

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Patent(Industrial Property Rights)] 化合物の製造方法2024

    • Inventor(s)
      菅裕明他
    • Industrial Property Rights Holder
      東京大学
    • Industrial Property Rights Type
      特許
    • Filing Date
      2024
    • Related Report
      2024 Annual Research Report

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Published: 2022-11-17   Modified: 2025-12-26  

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