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Study on single molecule mechanobiology of microtubule

Research Project

Project/Area Number 22KF0208
Project/Area Number (Other) 22F22050 (2022)
Research Category

Grant-in-Aid for JSPS Fellows

Allocation TypeMulti-year Fund (2023)
Single-year Grants (2022)
Section外国
Review Section Basic Section 90110:Biomedical engineering-related
Research InstitutionKyoto University

Principal Investigator

角五 彰  京都大学, 理学研究科, 教授 (10374224)

Co-Investigator(Kenkyū-buntansha) NASRIN SYEDA  京都大学, 理学研究科, 外国人特別研究員
Project Period (FY) 2023-03-08 – 2025-03-31
Project Status Granted (Fiscal Year 2023)
Budget Amount *help
¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 2024: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2023: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2022: ¥700,000 (Direct Cost: ¥700,000)
Keywordskinesin / Dynein / Microtubule / Mechanical stress / Mechano-transducer / Kinesin
Outline of Research at the Start

The current research hypothesizes that microtubules are mechanotransducers of mechanical stress. In this study, a comprehensive understanding of the issue will be made. The research will explore if the effect of the mechanically deformed microtubules is true regardless of the motor protein species.

Outline of Annual Research Achievements

The current research hypothesizes that microtubules are mechanotransducers of mechanical stress. In this study, a comprehensive understanding of the issue will be made. Last year the modulation of cargo transport in response to mechanical stress on the microtubule is a universal phenomenon independent of the motor protein by using kinesin was verified. Kinesin-driven transport of fluorescent quantum dots was carried out on microtubules fixed on a stretchable substrate. The effect of the mechanical stress on the cargo transport was systematically evaluated by applying compressive strain or tensile strain using the microstretcher chamber developed previously. Parameter analysis e.g., run length, velocities, pause frequencies, etc., from the fluorescence microscopy observation was done.
This year, we also verified if the modulation of cargo transport in response to mechanical stress is recovered if the applied stress on the microtubule was withdrawn. For this research, I will first apply compressive stress on the microtubule using my micro-stretcher and release the stress. Then I observed dynein or kinesin-driven cargo transport and compare it with the case of undeformed microtubules to explore the restoration of the transport dynamics.

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

Because the research is progressing as planned, it was concluded that the project was on track.

Strategy for Future Research Activity

Next year, we will summarize the following questions: (1) How does the mechanical stress-induced deformation of microtubules affect kinesin-driven cargo transport? (2) Is the cargo transport dynamics restored when applied stress on the microtubule is withdrawn? (3) Can the altered transport dynamics of dynein be theoretically explained by techniques like molecular dynamics simulation? We are also planning to propose a mechanism that explain the relationship between mechanical stress and the dynamics of kinesin.

Report

(2 results)
  • 2023 Research-status Report
  • 2022 Annual Research Report
  • Research Products

    (4 results)

All 2024 2022

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (1 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results) Book (2 results)

  • [Journal Article] Role of tubulin C-terminal tail on mechanical properties of microtubule2024

    • Author(s)
      Senjuti Nowroz, Syeda Rubaiya Nasrin, Arif Md Rashedul Kabir, Takefumi Yamashita, Tomoichiro Kusumoto, Junichi Taira, Marie Tani, Masatoshi Ichikawa, Kazuki Sada, Akira Kakugo
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 706 Pages: 149761-149761

    • DOI

      10.1016/j.bbrc.2024.149761

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Microtubules function as mechanosensor to regulate intracellular transport2022

    • Author(s)
      Akira Kakugo
    • Organizer
      EMBL Symposium: Microtubules: From Atoms to Complex Systems
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Book] Methods in Molecular Biology, Microtubules-Methods and Protocols2022

    • Author(s)
      Syeda Rubaiya Nasrin, Arif Md. Rashedul Kabir, Akira Kakugo
    • Total Pages
      11
    • Publisher
      Springer Nature
    • Related Report
      2022 Annual Research Report
  • [Book] Methods in Molecular Biology, Microtubules-Methods and Protocols2022

    • Author(s)
      6.Syeda Rubaiya Nasrin, Farhana Afroze, Arif Md. Rashedul Kabir, Akira Kakugo
    • Total Pages
      11
    • Publisher
      Springer Nature
    • Related Report
      2022 Annual Research Report

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Published: 2022-09-29   Modified: 2024-12-25  

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