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Innovation of genotoxicity tests - DNA damage, Mutation, Chromosome -

Research Project

Project/Area Number 23221006
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field Risk sciences of radiation/Chemicals
Research InstitutionKyoto University

Principal Investigator

Matsuda Tomonari  京都大学, 工学(系)研究科(研究院), 准教授 (50273488)

Co-Investigator(Kenkyū-buntansha) Ikura Tsuyoshi  京都大学, 放射線生物学研究センター, 准教授 (70335686)
足立 淳  国立研究開発法人医薬基盤・健康・栄養研究所, その他部局等, 研究員 (20437255)
Co-Investigator(Renkei-kenkyūsha) Adachi Jun  国立研究開発法人医薬基盤・健康・栄養研究所, 創薬基盤研究部, プロジェクト研究員 (20437255)
Project Period (FY) 2011-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥190,320,000 (Direct Cost: ¥146,400,000、Indirect Cost: ¥43,920,000)
Fiscal Year 2015: ¥37,180,000 (Direct Cost: ¥28,600,000、Indirect Cost: ¥8,580,000)
Fiscal Year 2014: ¥37,180,000 (Direct Cost: ¥28,600,000、Indirect Cost: ¥8,580,000)
Fiscal Year 2013: ¥38,480,000 (Direct Cost: ¥29,600,000、Indirect Cost: ¥8,880,000)
Fiscal Year 2012: ¥38,090,000 (Direct Cost: ¥29,300,000、Indirect Cost: ¥8,790,000)
Fiscal Year 2011: ¥39,390,000 (Direct Cost: ¥30,300,000、Indirect Cost: ¥9,090,000)
Keywords突然変異 / DNA損傷 / 染色体異常 / 遺伝毒性試験 / 1分子リアルタイムDNAシーケンサー / SMRTシーケンサー / 小核試験 / DNA損傷応答 / クロマチン / プロテオーム / ヒストン修飾 / 変異原試験 / ヒストンH2AX / DNAアダクトーム / タンパク質複合体解析 / 次世代DNAシーケンサー
Outline of Final Research Achievements

Genotoxicity tests are essential for pre-marketing hazard assessment of newly-developed chemicals. Recent development of analytical equipment and cell biology allow us to make innovation in this area. In this study, we tried to develop innovative genotoxicity tests which focused on DNA damage, mutation and mechanism of chromosomal aberration. As for DNA damage, we modified the protocol of DNA adductome method to make it faster and more sensitive. We also developed a new mutation assay using a single molecule real time DNA sequencer, enabling direct monitoring of mutation frequency in DNA of any samples. We also developed methods to evaluate inhibition of DNA damage response which is the important mechanism for DNA damage independent chromosomal aberration.

Assessment Rating
Verification Result (Rating)

A-

Assessment Rating
Result (Rating)

A-: Progress in the research is steadily towards the initial goal. However, further efforts are necessary as a part of the research progress is delayed.

Report

(9 results)
  • 2016 Research Progress Assessment (Verification Result) ( PDF )
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report   Abstract(Research Progress Assessment) ( PDF )   Research Progress Assessment (Result) ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (110 results)

All 2016 2015 2014 2013 2012 2011 Other

All Journal Article (38 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 38 results,  Open Access: 11 results,  Acknowledgement Compliant: 6 results) Presentation (70 results) (of which Int'l Joint Research: 1 results,  Invited: 10 results) Book (2 results)

  • [Journal Article] Disruption of DNA Damage-Response by Propyl Gallate and 9-Aminoacridine2016

    • Author(s)
      Matsuda S
    • Journal Title

      Toxicol. Sci.

      Volume: 150 Issue: 2 Pages: 1-12

    • DOI

      10.1093/toxsci/kfw039

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA methylation dynamics in mouse preimplantation embryos revealed by mass spectrometry2016

    • Author(s)
      Yoshinori Okamoto, Naoko Yoshida, Toru Suzuki, Nobuhiro Shimozawa, Maki Asami, Tomonari Matsuda, Nakao Kojima, Anthony C. F. Perry & Tatsuyuki Takada
    • Journal Title

      Scientific Reports

      Volume: 該当しない Issue: 1 Pages: 19134-19134

    • DOI

      10.1038/srep19134

    • NAID

      120005822766

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Coordinated regulation of TIP60 and PARP-1 in damaged chromatin dynamics.2016

    • Author(s)
      Ikura M
    • Journal Title

      Mol. Cell. Biol.

      Volume: Epub ahead of print Issue: 10 Pages: 1595-1607

    • DOI

      10.1128/mcb.01085-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nuclear pyruvate kinase M2 complex serves as a transcriptional coactivator of arylhydrocarbon receptor.2015

    • Author(s)
      Shun Matsuda, Jun Adachi, Masaru Ihara, Nobuhiro Tanuma, Hiroshi Shima, Akira Kakizuka, Masae Ikura, Tsuyoshi Ikura, Tomonari Matsuda
    • Journal Title

      Nucleic Acids Res

      Volume: 44(2) Issue: 2 Pages: 636-647

    • DOI

      10.1093/nar/gkv967

    • NAID

      120005818255

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mutation assay using single-molecule real-time (SMRTTM) sequencing technology2015

    • Author(s)
      Matsuda, T. Matsuda, S. Yamada, M.
    • Journal Title

      Genes and Environment

      Volume: 37 Issue: 1 Pages: 15-15

    • DOI

      10.1186/s41021-015-0017-5

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Absolute quantification of γH2AX using liquid chromatography-triple quadrupole tandem mass spectrometry2015

    • Author(s)
      Matsuda, S., Ikura, T., Matsuda, T.
    • Journal Title

      Analytical and Bioanalytical Chemistry

      Volume: in press Issue: 18 Pages: 5521-5527

    • DOI

      10.1007/s00216-015-8725-z

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Absolute quantification of acetylation and phosphorylation of the histone variant H2AX upon ionizing radiation reveals distinct cellular responses in two cancer cell lines2015

    • Author(s)
      Matsuda S
    • Journal Title

      Radiat. Environ. Biophys.

      Volume: 54 Issue: 4 Pages: 403-411

    • DOI

      10.1007/s00411-015-0608-3

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Protective role of ALDH2 against acetaldehyde-derived DNA damage in oesophageal squamous epithelium2015

    • Author(s)
      Amanuma Y, Ohashi S, Itatani Y, Tsurumaki M, Matsuda S, Kikuchi1 O, Naka Y, Miyamoto S, Oyama T, Kawamoto T, Whelan KA, Nakagawa H, Chiba T, Matsuda T, Muto M
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 14142-14142

    • DOI

      10.1038/srep14142

    • NAID

      120005678158

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Characterization of Pathogenic Escherichia coli in River Water by Simultaneous Detection and Sequencing of 14 Virulence Genes2015

    • Author(s)
      Gomi, R. Matsuda, T. Fujimori, Y. Harada, H. Matsui, Y. Yoneda, M.
    • Journal Title

      Environmental Science & Technology

      Volume: 49 Issue: 11 Pages: 6800-6807

    • DOI

      10.1021/acs.est.5b00953

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Acetylation of Histone H2AX at Lys 5 by the TIP60 Histone Acetyltransferase Complex Is Essential for the Dynamic Binding of NBS1 to Damaged Chromatin.2015

    • Author(s)
      Ikura M
    • Journal Title

      Mol. cell. Biol.

      Volume: 35 Issue: 24 Pages: 4147-4157

    • DOI

      10.1128/mcb.00757-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] hCAS/CSE1L regulates RAD51 distribution and focus formation for homologous recombinational repair2015

    • Author(s)
      1.Okimoto S, Sun J, Fukuto A, Horikoshi Y, Matsuda S, Matsuda T, Ikura M, Ikura T, Machida S, Kurumizaka H, Miyamoto Y, Oka M, Yoneda Y, Kiuchi Y, Tashiro S.
    • Journal Title

      Genes Cells.

      Volume: 20 Issue: 9 Pages: 681-94

    • DOI

      10.1111/gtc.12262

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Data for Proteomic Analysis of ATP-Binding Proteins and Kinase Inhibitor Target Proteins Using an ATP Probe.2015

    • Author(s)
      Adachi, J., Kishida, M., Watanabe, S., Hashimoto, Y., Fukamizu, K., and Tomonaga, T.
    • Journal Title

      Data in Brief

      Volume: 5 Pages: 726-729

    • DOI

      10.1016/j.dib.2015.10.018

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Regulation of homologous recombinational repair by lamin B1 in radiation-induced DNA damage.2015

    • Author(s)
      Liu NA, Sun J, Kono K, Horikoshi Y, Ikura T, Tong X, Haraguchi T, Tashiro S.
    • Journal Title

      FASEB J.

      Volume: in press Issue: 6 Pages: 2514-25

    • DOI

      10.1096/fj.14-265546

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Impairment of aldehyde dehydrogenase 2 increases accumulation of acetaldehyde-derived DNA damage in the esophagus after ethanol ingestion2014

    • Author(s)
      Yukawa, Y., Ohashi, S., Amanuma, Y., Nakai, Y., Tsurumaki, M., Kikuchi, O., Miyamoto, S., Oyama, T., Kawamoto, T., Chiba, T., Matsuda, T., Muto, M.
    • Journal Title

      Am J Cancer Res

      Volume: 4 Pages: 279-284

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Proteome-wide discovery of unknown ATP-binding proteins and kinase inhibitor target proteins using an ATP probe.2014

    • Author(s)
      Jun Adachi, Marina Kishida, Shio Watanabe, Yuuki Hashimoto, Kazuna Fukamizu, Takeshi Tomonaga.
    • Journal Title

      Journal of proteome research

      Volume: 13 Issue: 12 Pages: 5461-5470

    • DOI

      10.1021/pr500845u

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fecal source tracking in water by next-generation sequencing technologies using host-specific Escherichia coli genetic markers2014

    • Author(s)
      Gomi, R., Matsuda, T., Matsui, Y., Yoneda, M.
    • Journal Title

      Environ Sci Technol

      Volume: 48 Issue: 16 Pages: 9616-9623

    • DOI

      10.1021/es501944c

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] An easy-to-use genotoxicity assay using EGFP-MDC1-expressing human cells2014

    • Author(s)
      Matsuda, S., Matsuda, R., Matsuda, Y., Yanagisawa, S., Ikura, M., Ikura, T., Matsuda, T.
    • Journal Title

      Genes and Environment

      Volume: 36 Pages: 17-28

    • NAID

      130004481211

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Impaired 8-hydroxyguanine repair activity of MUTYH variant p. Arg109Trp found in a Japanese patient with early-onset colorectal cancer2014

    • Author(s)
      Shinmura, K., Goto, M., Tao, H., Kato, H., Suzuki, R., Nakamura, S., Matsuda, T., Yin, G., Morita, M., Kono, S., Sugimura, H.
    • Journal Title

      Oxidative Medicine and Cellular Longevity

      Volume: 2014 Pages: 617351-617351

    • DOI

      10.1155/2014/617351

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A Pilot Study for the Mutation Assay Using a High-throughput DNA Sequencer2013

    • Author(s)
      Matsuda, T., Takamune, M., Matsuda, Y., Yamada, M
    • Journal Title

      Genes and Environment

      Volume: 35 Pages: 53-56

    • NAID

      10031158581

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA Damage in Rheumatoid Arthritis: An Age-Dependent Increase in the Lipid Peroxidation-Derived DNA Adduct, Heptanone-Etheno-2'-Deoxycytidine2013

    • Author(s)
      Ogawa, M., Matsuda, T., Ogata, A., Hamasaki, T., Kumanogoh, A., Toyofuku, T., *Tanaka, T.
    • Journal Title

      Autoimmune Diseases

      Volume: 2013 Pages: 183487-183487

    • DOI

      10.1155/2013/183487

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A novel interplay between the Fanconi anemia core complex and ATR-ATRIP kinase during DNA cross-link repair2013

    • Author(s)
      J Tomida, A Itaya, T Shigechi, J Unno, E Uchida, M Ikura, Y Masuda, S Matsuda J Adachi, M Kobayashi, AR Meetei, Y Maehara, K Yamamoto K Kamiya, A Matsuura, T Matsuda. T Ikura, M Ishiai, M Takata
    • Journal Title

      Nucleic Acids Research

      Volume: VOL. 41 Issue: 14 Pages: 6930-6941

    • DOI

      10.1093/nar/gkt467

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of Octenal-Related dA and dC Adducts Formed by Reactions with a Hemin-omega-6-fat Peroxidation Model System2013

    • Author(s)
      Kawai, K., Kawasaki, Y., Kubota, Y., Kimura, T., Sawa, R., Matsuda, T., Kasai, H.
    • Journal Title

      Chem Res Toxicol

      Volume: 26 Issue: 10 Pages: 1554-1560

    • DOI

      10.1021/tx400245a

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Adduct formation and repair, and translesion DNA synthesis across the adducts in human cells exposed to 3-nitrobenzanthrone2013

    • Author(s)
      M. Kawanishi, Y. Fujikawa, et al.
    • Journal Title

      Mutation Research

      Volume: 753巻 Issue: 2 Pages: 93-100

    • DOI

      10.1016/j.mrgentox.2013.03.005

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Miscoding properties of 8-chloro-2'-deoxyguanosine, a hypochlorous acid-induced DNA adduct, catalysed by human DNA polymerases2013

    • Author(s)
      A. Sassa
    • Journal Title

      Mutagenesis

      Volume: 28 Issue: 1 Pages: 81-88

    • DOI

      10.1093/mutage/ges056

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analyses of 8-Methyldeoxyadenosine and 8-Methyldeoxyguanosine as Markers of Free Radical-mediated DNA Methylation in Mouse2013

    • Author(s)
      Kasai, H., Kawai, K., Song, M., Li, Y., Hattori, T., Matsuda, T.
    • Journal Title

      Genes and Environment

      Volume: 35 Pages: 5-9

    • NAID

      10031138448

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A pilot study for the mutation assay using a high-throughput DNA sequencer2013

    • Author(s)
      Matsuda, T et al
    • Journal Title

      Genes and Environment

      Volume: in press

    • NAID

      10031158581

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of Missing Proteins in the neXtProt Database and Unregistered Phosphopeptides in the PhosphoSitePlus Database As Part of the Chromosome-Centric Human Proteome Project.2013

    • Author(s)
      Shiromizu, T. et al.
    • Journal Title

      Journal of Proteome Research

      Volume: in press

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Lipid peroxidation-induced DNA adducts in human gastric mucosa2012

    • Author(s)
      Matsuda T, Tao H, Goto M, Yamada H, Suzuki M, Wu Y, Xiao N, He Q, Guo W, Cai Z, Kurabe N, Ishino K, Matsushima Y, Shinmura K, Konno H, Maekawa M, Wang Y, Sugimura H
    • Journal Title

      Carcinogenesis

      Volume: 34 Issue: 1 Pages: 121-127

    • DOI

      10.1093/carcin/bgs327

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The effect of ethanol on the formation of N^<2-> ethylidene-dG adducts in mice: implications for alcohol-related carcinogenicity of the oral cavity and esophagus2012

    • Author(s)
      Yu H-S, Oyama T, Matsuda T, Isse T, Yamaguchi T, Tanaka M, Tsuji M, Kawamoto T
    • Journal Title

      Biomarkers

      Volume: 17 Issue: 3 Pages: 269-274

    • DOI

      10.3109/1354750x.2012.666675

    • Related Report
      2012 Annual Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Combination of ADH1B*2/ALDH2*2 polymorphisms alters acetaldehyde-derived DNA damage in the blood of Japanese alcoholics2012

    • Author(s)
      Yukawa, Y. et al.
    • Journal Title

      Cancer Science

      Volume: 103 Issue: 9 Pages: 1651-1655

    • DOI

      10.1111/j.1349-7006.2012.02360.x

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] In-depth Membrane Proteomic Study of Breast Cancer Tissues for the Generation of a Chromosome-based Protein List2012

    • Author(s)
      Muraoka S, Kume H, Adachi J, Shiromizu T, Watanabe S, Masuda T, Ishihama Y, Tomonaga T
    • Journal Title

      J Proteome Res

      Volume: 12(1) Issue: 1 Pages: 208-13

    • DOI

      10.1021/pr300824m

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genotoxicity of multi-walled carbon nanotubes in both in vitro and in vivo assay systems2012

    • Author(s)
      Kato, T., et al
    • Journal Title

      Nanotoxicology

      Volume: (in press) Issue: 4 Pages: 452-461

    • DOI

      10.3109/17435390.2012.674571

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A new system for analyzing ionizing radiation-inducedchromosome abnormalities2012

    • Author(s)
      Shi L., et al
    • Journal Title

      Radiation Research

      Volume: (in press)

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genotoxicity of colloidal fullerene c (60)2011

    • Author(s)
      Matsuda, S., et al
    • Journal Title

      Environ Sci Technol

      Volume: 45 Issue: 9 Pages: 4133-4138

    • DOI

      10.1021/es1036942

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reduced expression of MUTYH with suppressive activity against mutations caused by 8-hydroxyguanine is a novel predictor of a poor prognosis in human gastric cancer2011

    • Author(s)
      Shinmura, et.Al
    • Journal Title

      The Journal of Pathology

      Volume: 225 Issue: 3 Pages: 414-423

    • DOI

      10.1002/path.2953

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aberrant expression and mutation-inducing activity of AID in human lung cancer2011

    • Author(s)
      Shinmura K, Igarashi H, Goto M, Tao H, Yamada H, Matsuura S, Tajima M, Matsuda T, Yamane A, Funai K, Tanahashi M, Niwa H, Ogawa H, Sugimura H
    • Journal Title

      Ann Surg Oncol

      Volume: 18 Issue: 7 Pages: 2084-2092

    • DOI

      10.1245/s10434-011-1568-8

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genetic susceptibility to lung cancer2011

    • Author(s)
      Sugimura, H., et al
    • Journal Title

      Front Biosci (Schol Ed)

      Volume: 3 Pages: 1463-1477

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Purification of the Human SMN-GEMIN2 Complex and Assessment of Its Stimulation of RAD51-Mediated DNA Recombination Reactions2011

    • Author(s)
      Motoki Takaku, Takashi Tsujita, Naoki Horikoshi, Yoshimasa Takizawa, Yong, Qing, Kouji Hirota, Masae Ikura, Tsuyoshi Ikura, Shunichi Takeda, Hitoshi Kurumizaka
    • Journal Title

      Biochemistry

      Volume: 50 Issue: 32 Pages: 6797-6805

    • DOI

      10.1021/bi200828g

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] ピルビン酸キナーゼとピルビン酸デヒドロゲナーゼ複合体によるアセチルCoAの地産地消モデル2015

    • Author(s)
      松田俊, 足立淳, 井原賢, 田沼延公, 島礼, 垣塚彰, 井倉正枝, 井倉毅, 松田知成
    • Organizer
      日本生化学会大会
    • Place of Presentation
      神戸市
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] LC/MS/MSによるゲノムストレス応答の定量2015

    • Author(s)
      松田知成, 松田俊
    • Organizer
      日本生化学会大会
    • Place of Presentation
      神戸市
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] DNA損傷応答における動的クロマチン平衡とその意義2015

    • Author(s)
      井倉毅, 古谷寛治, 松田俊, 松田知成, 松田涼, 田代聡, 井倉正枝
    • Organizer
      日本生化学会大会
    • Place of Presentation
      神戸市
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] 塩基除去修復因子チミンDNAグリコシラーゼの構造活性相関と機能制御2015

    • Author(s)
      中村知史, 中村知史, 村上浩一, 村上浩一, 松田俊, 松田知成, 上原芳彦, 小野哲也, 西谷秀男, 菅澤薫
    • Organizer
      日本生化学会大会
    • Place of Presentation
      神戸市
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] SMRT DNAシーケンサーを用いた突然変異検出法の開発2015

    • Author(s)
      松田知成, 松田俊, 山田雅巳
    • Organizer
      日本環境変異原学会
    • Place of Presentation
      福岡市
    • Year and Date
      2015-11-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] LC/MS/MSを用いたDNA修復・損傷応答タンパク質及びヒストン修飾の絶対定量2015

    • Author(s)
      松田俊, 井倉正枝, 古谷寛治, 井倉毅, 松田知成
    • Organizer
      日本環境変異原学会
    • Place of Presentation
      福岡市
    • Year and Date
      2015-11-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] DNA adductome and mutation assay using NGS2015

    • Author(s)
      Tomonari Matsuda
    • Organizer
      Malaysian congress of toxicology (MyCOT 2015)
    • Place of Presentation
      クアラルンプール
    • Year and Date
      2015-10-29
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Mass spectrometry-based quantitative proteome analysis of histone modifications and chromatin proteins2015

    • Author(s)
      足立淳、朝長毅
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋市
    • Year and Date
      2015-10-08
    • Related Report
      2015 Annual Research Report
  • [Presentation] Detection of low frequent mutations using a single-molecule real-time (SMRT) sequencing technology2015

    • Author(s)
      松田知成, 山田雅巳
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋市
    • Year and Date
      2015-10-08
    • Related Report
      2015 Annual Research Report
  • [Presentation] C18-SCX StageTipを用いた新規ペプチド分画法の開発2015

    • Author(s)
      足立淳、橋口一成、佐藤美佐子、長野麻衣子、橋本裕希、深水和菜、佐藤彩子、石濱泰、朝長毅
    • Organizer
      日本プロテオーム学会
    • Place of Presentation
      熊本市
    • Year and Date
      2015-07-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] 絶対定量によるヒストンH2AXのリン酸化およびアセチル化の多様性及びダイナミクス解析2015

    • Author(s)
      松田 俊, 古谷 寛治, 井倉 正枝, 井倉 毅, 松田 知成
    • Organizer
      日本プロテオーム学会
    • Place of Presentation
      熊本市
    • Year and Date
      2015-07-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] 1分子DNAシーケンサーを用いた突然変異検出法の開発2015

    • Author(s)
      松田知成, 松田俊, 山田雅巳
    • Organizer
      日本がん予防学会
    • Place of Presentation
      さいたま市
    • Year and Date
      2015-06-05
    • Related Report
      2015 Annual Research Report
  • [Presentation] The role of the pyruvate kinase M2 (PKM2) in the Arylhydrocarbon Receptor-mediated Transcription2015

    • Author(s)
      Ikura, T., Matsuda, S., Ikura, M., Matsuda, T.
    • Organizer
      5th meeting of the Asian Forum for chromatin and chromosome Biology
    • Place of Presentation
      Bungalow, India
    • Year and Date
      2015-01-13 – 2015-01-19
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] The role of histone H2AX dynamics in DNA damage response2014

    • Author(s)
      Ikura , T., Matsuda, R., Tashiro, R., Ikura, M.
    • Organizer
      The 4D Nucleome 2014
    • Place of Presentation
      広島市
    • Year and Date
      2014-12-17 – 2014-12-20
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] DNAアダクトーム法による遺伝毒性の評価2014

    • Author(s)
      松田知成
    • Organizer
      日本環境変異原学会 第43回大会
    • Place of Presentation
      東京都
    • Year and Date
      2014-12-04 – 2014-12-05
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] EGFP-MDC1発現細胞を用いたDNA損傷応答阻害の検出2014

    • Author(s)
      松田俊、柳澤信也、 井倉毅、 松田知成
    • Organizer
      日本環境変異原学会 第43回大会
    • Place of Presentation
      東京都
    • Year and Date
      2014-12-04 – 2014-12-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] DNA損傷応答の定量的理解2014

    • Author(s)
      松田知成
    • Organizer
      第87回 日本生化学会
    • Place of Presentation
      京都市
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] DNA損傷応答におけるヒストンH2AX化学修飾の時空間的制御2014

    • Author(s)
      井倉 毅、松田 涼、井倉正枝
    • Organizer
      第87回 日本生化学会
    • Place of Presentation
      京都市
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Simplified and minimized fractionation using StageTips for in-depth proteome and phosphoproteome analysis2014

    • Author(s)
      Adachi, J., Hashiguchi, K., Sato, M., Fukamizu, K., Tomonaga, T.
    • Organizer
      HUPO2014 13th World Congress
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2014-10-05 – 2014-10-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] Identification of octenal-related dA- and dC-adducts formed by reactions with a hemin-ω-6-fat peroxidation model system2014

    • Author(s)
      Kawai, K., Matsuda, T., Kasai, H.
    • Organizer
      第73回日本癌学会学術総会
    • Place of Presentation
      横浜市
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Kinome and ATPome-wide selectivity profiling of ATP-competitive kinase inhibitors.2014

    • Author(s)
      Adachi, J., Tomonag, T.
    • Organizer
      第73回日本癌学会学術総会
    • Place of Presentation
      横浜市
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 内因性DNA損傷と自然突然変異頻度2014

    • Author(s)
      松田知成
    • Organizer
      日本進化学会 第16回大阪大会
    • Place of Presentation
      高槻市
    • Year and Date
      2014-08-21 – 2014-08-24
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] StageTipを用いた新規分画法により、プロテオーム解析・リン酸化プロテオーム解析の深さと簡易性の両立を図る2014

    • Author(s)
      足立淳、橋口一成、佐藤美佐子、橋本裕希、深水和菜、朝長毅
    • Organizer
      日本プロテオーム学会2014年会
    • Place of Presentation
      つくば市
    • Year and Date
      2014-07-17 – 2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] A Pilot Study for the New mutation assay using a High-throughput DNA sequencer2013

    • Author(s)
      Matsuda, T., Takamune, M., Matsuda, Y., Yamada, M.
    • Organizer
      11th International Conference on Environmental Mutagens (ICEM)
    • Place of Presentation
      Foz Do Igua&ccedil;u, Brazil
    • Related Report
      2013 Annual Research Report
  • [Presentation] ATP Accessibility Screening (AAS), a high-throughput and high-resolution kinase analysis platform for signaling research2013

    • Author(s)
      Adachi, J., Higo, D., Kishida, M., Watanabe, S., Kuwan, M., Hashimoto, Y., Fukamizu, K., Nishiwaki, E., Tomonaga, T.
    • Organizer
      Human Proteome Organization (HUPO) 12th annual congress
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] ヒト組織中における2-オクテナル関連DNA付加体の定量2013

    • Author(s)
      松田知成, 松田陽子, 河井一明, 葛西宏, 椙村春彦
    • Organizer
      日本環境変異原学会第42回大会
    • Place of Presentation
      岡山
    • Related Report
      2013 Annual Research Report
  • [Presentation] eGFP-MDC1発現細胞を用いた簡便な変異原性試験法の開発2013

    • Author(s)
      松田俊, 井倉正枝, 井倉毅, 松田知成
    • Organizer
      日本環境変異原学会第42回大会
    • Place of Presentation
      岡山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 次世代DNAシーケンサーを用いた、表現型によらない変異原性試験の開発2013

    • Author(s)
      山田雅巳, 高宗万希子, 松田知成
    • Organizer
      日本環境変異原学会第42回大会
    • Place of Presentation
      岡山
    • Related Report
      2013 Annual Research Report
  • [Presentation] ヘミン、ω-6脂質過酸化反応に伴って生成するオクテナール関連新規dAおよびdC-付加体の構造2013

    • Author(s)
      河井一明, 川﨑裕也, 久保田由美子, 木村智之, 澤竜一, 松田知成, 葛西宏
    • Organizer
      日本環境変異原学会第42回大会
    • Place of Presentation
      岡山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 天然有機物(NOM)のDNA損傷活性に対する影響評価2013

    • Author(s)
      三崎健太郎, 日下部武敏, 松田知成, 清水芳久
    • Organizer
      日本環境変異原学会第42回大会
    • Place of Presentation
      岡山
    • Related Report
      2013 Annual Research Report
  • [Presentation] DNAアダクトーム法、次世代DNAシーケンサーを用いた癌の分子疫学研究2013

    • Author(s)
      松田知成
    • Organizer
      第36回日本がん疫学・分子疫学研究会
    • Place of Presentation
      岐阜
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] タバコ煙凝集物によるフリーラジカルを介したヌクレオシド並びにDNAのメチル化2013

    • Author(s)
      河井一明, 李云善, 松田知成, 葛西宏
    • Organizer
      第72回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] クロマチンの動的変化を介したDNA損傷応答シグナルのエピジェネティクス制御2012

    • Author(s)
      井倉毅
    • Organizer
      第10回口腔医科学フロンティア
    • Place of Presentation
      大阪大学歯学部記念館・吹田市(招待講演)
    • Year and Date
      2012-03-03
    • Related Report
      2011 Annual Research Report
  • [Presentation] 次世代DNAシーケンサーを用いた変異原性試験の開発―パイロット試験―2012

    • Author(s)
      松田知成
    • Organizer
      日本環境変異原学会 第41回大会
    • Place of Presentation
      静岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] DNAアダクトーム―開発と応用―2012

    • Author(s)
      松田知成
    • Organizer
      第39回日本毒性学会学術年会
    • Place of Presentation
      仙台
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 次世代DNAシーケンサーを用いた変異原性試験の開発―変異スペクトラムの特徴2012

    • Author(s)
      山田雅巳
    • Organizer
      日本環境変異原学会 第41回大会
    • Place of Presentation
      静岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] ピルビン酸キナーゼM2はダイオキシン受容体の活性化補助因子である2012

    • Author(s)
      松田俊
    • Organizer
      第35回 日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] 関節リウマチ患者における過酸化脂質由来DNA付加体HεdCの年齢依存的増加2012

    • Author(s)
      小川真佐子
    • Organizer
      第35回 日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] マウス発がんモデルにおけるフリーラジカル機構によるDNAのメチル化マーカーm8dA、m8dGの分析2012

    • Author(s)
      河井一郎
    • Organizer
      日本環境変異原学会 第41回大会
    • Place of Presentation
      静岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] DNA損傷応答シグナルのエピジェネティクス制御機構の解明と展望2012

    • Author(s)
      井倉 毅
    • Organizer
      日本放射線影響学会第55回大会
    • Place of Presentation
      仙台
    • Related Report
      2012 Annual Research Report
  • [Presentation] Phosphorylation dynamics in an early response of DNA damage signaling2012

    • Author(s)
      足立淳
    • Organizer
      HUPO2012 11th World Congress
    • Place of Presentation
      米国 ボストン
    • Related Report
      2012 Annual Research Report
  • [Presentation] リン酸化プロテオミクスを用いた新規DNA損傷初期応答キナーゼの探索2012

    • Author(s)
      足立淳
    • Organizer
      日本放射線影響学会第55回大会
    • Place of Presentation
      仙台
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Discovery of early-response kinases in DNA-damage signaling using phosphoproteome analysis2012

    • Author(s)
      足立淳
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      札幌
    • Related Report
      2012 Annual Research Report
  • [Presentation] リン酸化プロテオミクスを用いた新規DNA損傷初期応答キナーゼの探索2012

    • Author(s)
      足立淳
    • Organizer
      日本プロテオーム学会2012年会
    • Place of Presentation
      東京
    • Related Report
      2012 Annual Research Report
  • [Presentation] クロマチンの動的変化を介したDNA損傷応答シグナルのエピジェネティクス制御2012

    • Author(s)
      井倉毅
    • Organizer
      第3次対がん10か年総合戦略平成16年-25年度・文部科学省がん支援活動、合同公開シンポジウム
    • Place of Presentation
      学術総合センター・東京都(招待講演)
    • Related Report
      2011 Annual Research Report
  • [Presentation] クロマチンの動的変化を介したDNA損傷応答シグナルのエピジェネティクス制御2012

    • Author(s)
      井倉毅
    • Organizer
      第29回染色体ワークショップ
    • Place of Presentation
      仙台市
    • Related Report
      2011 Annual Research Report
  • [Presentation] The role ofchromatin dynamics in DNA damage-induced checkpoint activation2012

    • Author(s)
      Ikura, et al
    • Organizer
      広島大学原爆放射線医科学研究所創立50周年記念国際シンポジウム
    • Place of Presentation
      広島市
    • Related Report
      2011 Annual Research Report
  • [Presentation] The role of histone H2AX eviction in DNAdamage-induced checkpoint activation2011

    • Author(s)
      井倉正枝, ら
    • Organizer
      第34回日本分子生物学会年会ワークショップ
    • Place of Presentation
      パシフィコ横浜・横浜(招待講演)
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] A new system for analyzing ionizingradiation-induced chromosome abnormalities2011

    • Author(s)
      Shi, L., et al
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] SMN-GEMIN2 complex stimulates the RAD51-mediatedrecombination reactions2011

    • Author(s)
      Takaku, M., et al
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] DNA損傷応答におけるヒストンバリアントH2A.Z isoformの関与2011

    • Author(s)
      西淵いくの, ら
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] Mass spectrometric analysis identifiesfactors associated with the Fanconi anemia proteins FANCD2 and FANCI2011

    • Author(s)
      Unno, J., et al
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] リン酸化プロテオミクスを用いた新規DNA損傷初期応答キナーゼの探索2011

    • Author(s)
      足立淳, ら
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] ゲノム損傷におけるクロマチンの動的変化とエピジェネティクス制御2011

    • Author(s)
      井倉毅
    • Organizer
      第3回エピジェネティクス療法研究会
    • Place of Presentation
      東京都(招待講演)
    • Year and Date
      2011-11-03
    • Related Report
      2011 Annual Research Report
  • [Presentation] NA損傷応答シグナルにおけるTIP60ヒストンアセチル化酵素複合体のダイナミクス2011

    • Author(s)
      井倉毅
    • Organizer
      構造エピゲノム研究会第4回ワークショップ
    • Place of Presentation
      横浜(招待講演)
    • Year and Date
      2011-07-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] ゲノム疾患研究の現状と未来2011

    • Author(s)
      井倉毅
    • Organizer
      神戸大学バイオシグナル研究センター特別講義
    • Place of Presentation
      神戸大学(招待講演)
    • Year and Date
      2011-06-10
    • Related Report
      2011 Annual Research Report
  • [Presentation] BN/SDS-PAGEを用いたMLH1複合体の解析2011

    • Author(s)
      竹内智規, ら
    • Organizer
      日本環境変異原学会(JEMS)第40回大会
    • Place of Presentation
      学術総合センター・東京都
    • Related Report
      2011 Annual Research Report
  • [Presentation] 8-クロロクアニンDNA付加体を含むオリゴマーの構築とその誤塩基対形成機構に関する研究2011

    • Author(s)
      安井学, ら
    • Organizer
      日本環境変異原学会(JEMS)第40回大会
    • Place of Presentation
      学術総合センター・東京都
    • Related Report
      2011 Annual Research Report
  • [Presentation] ラットを用いた骨髄小核試験におけるDNAアダクトーム解析2011

    • Author(s)
      加藤杏子, ら
    • Organizer
      日本環境変異原学会(JEMS)第40回大会
    • Place of Presentation
      学術総合センター・東京都
    • Related Report
      2011 Annual Research Report
  • [Presentation] ピルビン酸キナーゼPKM2とダイオキシン受容体AhRの相互作用の機能解明2011

    • Author(s)
      松田俊, ら
    • Organizer
      日本環境変異原学会(JEMS)第40回大会
    • Place of Presentation
      学術総合センター・東京都
    • Related Report
      2011 Annual Research Report
  • [Presentation] ナノマテリアルによりマウス肺に誘発されるDNA付加体の網羅的解析2011

    • Author(s)
      石野孔裕, ら
    • Organizer
      日本環境変異原学会(JEMS)第40回大会
    • Place of Presentation
      学術総合センター・東京都
    • Related Report
      2011 Annual Research Report
  • [Presentation] エタノール摂取によるアルデヒド脱水素酵素2ノックアウトマウスの体重変動と生存率2011

    • Author(s)
      小山倫浩, ら
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場・名古屋市
    • Related Report
      2011 Annual Research Report
  • [Presentation] ヒト肺癌における脱アミノ化酵素AIDの異常発現と変異誘導性2011

    • Author(s)
      新村和也, ら
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場・名古屋市
    • Related Report
      2011 Annual Research Report
  • [Presentation] フリーラジカル機構を介した発がんプロモーターcumene hydroperoxideによるマウス皮膚DNAのメチル化2011

    • Author(s)
      宋明芬, ら
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場・名古屋市
    • Related Report
      2011 Annual Research Report
  • [Presentation] ピルビン酸キナーゼPKM2とダイオキシン受容体AhRの相互作用の機能解明2011

    • Author(s)
      松田俊, ら
    • Organizer
      環境ホルモン学会第14回研究発表会
    • Place of Presentation
      東京大学山上会館・東京都
    • Related Report
      2011 Annual Research Report
  • [Presentation] Bioinformatics-GO annotation-2011

    • Author(s)
      足立淳
    • Organizer
      日本プロテオーム学会2011年会
    • Place of Presentation
      新潟
    • Related Report
      2011 Annual Research Report
  • [Presentation] DNA損傷応答におけるリン酸化・ユビキチン化プロテオーム定量解析2011

    • Author(s)
      足立淳, ら
    • Organizer
      日本プロテオーム学会2011年会
    • Place of Presentation
      新潟
    • Related Report
      2011 Annual Research Report
  • [Presentation] Global phosphorylation and ubiquitination dynamics in DNA-damage response network2011

    • Author(s)
      足立淳, ら
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場・名古屋市
    • Related Report
      2011 Annual Research Report
  • [Presentation] Global phosphorylation and ubiquitination dynamics in DNA-damage response network2011

    • Author(s)
      Adach, et al
    • Organizer
      HUPO2011
    • Place of Presentation
      Geneva, Switzerland
    • Related Report
      2011 Annual Research Report
  • [Presentation] DNA損傷応答におけるヒストンH2AXのダイナミクス

    • Author(s)
      井倉 毅
    • Organizer
      第一回ヒストンヴァリアント研究会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Book] Cancer and Inflammation Mechanisms: Chemical, Biological, and Clinical Aspects, (Chapter6)2014

    • Author(s)
      Matsuda, T., Chou, P.-H., Sugimura, H.
    • Total Pages
      400
    • Publisher
      Wiley
    • Related Report
      2013 Annual Research Report
  • [Book] 遺伝情報の発視制御-転写機構からエピジェネティクスまで-著David S.Latchman(第3章翻訳2011

    • Author(s)
      松田俊、井倉正枝、井倉毅
    • Total Pages
      429
    • Publisher
      メディカル・サイエンス・インターナショナル
    • Related Report
      2011 Annual Research Report

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Published: 2011-06-18   Modified: 2019-07-29  

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