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Structural basis and functional evolution of RNA maturation machinary

Research Project

Project/Area Number 23350081
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionEhime University

Principal Investigator

HORI Hiroyuki  愛媛大学, 理工学研究科, 教授 (20256960)

Co-Investigator(Kenkyū-buntansha) SUZUKI Tsutomu  東京大学, 大学院・工学系研究科, 教授 (20292782)
HIRATA Akira  愛媛大学, 大学院・理工学研究科, 講師 (60527381)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥19,370,000 (Direct Cost: ¥14,900,000、Indirect Cost: ¥4,470,000)
Fiscal Year 2013: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2012: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2011: ¥10,920,000 (Direct Cost: ¥8,400,000、Indirect Cost: ¥2,520,000)
Keywords核酸 / 酵素 / タンパク質 / RNA / RNA / RNA修飾 / RNAメチル化 / tRNA / メチル化酵素 / RNA分解制御 / ゲノム / 構造解析
Research Abstract

The purpose of this study is physical and chemical understanding of RNA maturation system. The study were performed for three years. We mainly researched the relatively simple organism of three domains of life (eukaryotes, archaea and eubacteria). We chracterized several tRNA modification enzymes and tRNA splicing endonulceases by X-ray crystal structural study and biochemical methods. Furthermore, we investigated the network between modified nucleosides in tRNA and tRNA modification enzymes using gene disruptant strains. Moreover, we found distinct tRNA modifications in a thermo-acidophilic archaeon, Thermoplasma acidophilum.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (140 results)

All 2014 2013 2012 2011 Other

All Journal Article (20 results) (of which Peer Reviewed: 20 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (111 results) (of which Invited: 3 results) Book (3 results) Remarks (6 results)

  • [Journal Article] Methylated nucleosides in tRNA and tRNA methyltransferases2014

    • Author(s)
      H. Hori
    • Journal Title

      Frontiers in Genetics

      Volume: (in press)

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Methylated nucleosides in tRNA and tRNA methyltransferase2014

    • Author(s)
      H. Hori
    • Journal Title

      Frontiers in Genetics

      Volume: in press

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distinct tRNA modifications in the thermo-acidophilic archaeon, Thermoplasma acidophilum2013

    • Author(s)
      C. Tomikawa, T. Ohira, Y. Inoue, T. Kawamura, A. Yamagishi, T. Suzuki, and H. Hori
    • Journal Title

      FEBS Letters 587

      Pages: 3575-3580

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] The catalytic domain of topological knot tRNA methyltransferase (TrmH) discriminates between substrate tRNA and nonsubstrate tRNA via an induced-fit process2013

    • Author(s)
      A. Ochi, K. Makabe, R. Yamagami, A. Hirata, R. Sakaguchi, Y.M. Hou, K. Watanabe, O. Nureki, K. Kuwajima, and H. Hori
    • Journal Title

      J. Biol. Chem

      Volume: 288 Pages: 25562-25574

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Degradation of initiator tRNAMet by Xrn1/2 via its accumulation in the nucleus of heat-treated HeLa cells2013

    • Author(s)
      K. Watanabe, R. Miyagawa, C. Tomikawa, R. Mizuno, A. Takahashi, H. Hori, and K. Ijiri
    • Journal Title

      Nucleic Acids Res

      Volume: 41 Pages: 4671-4685

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Degradation of initiator tRNAMet by Xrn1/2 via its accumulation in the nucleus of heat-treated HeLa cells2013

    • Author(s)
      Watanabe K, Miyagawa R, Tomikawa C, Mizuno R, Takahashi A, Hori H, Ijiri K.
    • Journal Title

      Nucleic Acids Res

      Volume: 41 Issue: 8 Pages: 4671-4685

    • DOI

      10.1093/nar/gkt153

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The catalytic domain of topological knot tRNA methyltransferase (TrmH) discriminates between substrate tRNA and nonsubstrate tRNA via an induced-fit process.2013

    • Author(s)
      A. Ochi, K. Makabe, R. Yamagami, A. Hirata, R. Sakaguchi, Y.M. Hou, K. Watanabe, O. Nureki, K. Kuwajima, and H. Hori
    • Journal Title

      J. Biol. Chem.

      Volume: 288 Issue: 35 Pages: 25562-25574

    • DOI

      10.1074/jbc.m113.485128

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distinct tRNA modifications in the thermo-acidophilic archaeon, Thermoplasma acidophilum2013

    • Author(s)
      Tomikawa, C., Ohira, T., Inoue, Y., Kawamura, T., Yamagishi, A., Suzuki, T. and Hori, H.
    • Journal Title

      FEBS Lett

      Volume: 587 Issue: 21 Pages: 3575-3580

    • DOI

      10.1016/j.febslet.2013.09.021

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Degradation of initiator tRNAMet by Xrn1/2 via its accumulation in the nucleus of heat-treated HeLa cells.2013

    • Author(s)
      K. Watanabe, R. Miyagawa, C. Tomikawa, R. Mizuno, A. Takahashi, H. Hori, and K. Ijiri
    • Journal Title

      Nucleic Acids Res.

      Volume: 41 Pages: 4671-4685

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO)2012

    • Author(s)
      R. Yamagami, K. Yamashita, H. Nishimasu, C. Tomikawa, A. Ochi, C. Iwashita, A. Hirata, R. Ishitani, O. Nureki, and H. Hori
    • Journal Title

      J. Biol. Chem

      Volume: 287 Pages: 42480-42494

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] X-ray structure of the fourth type of archaeal tRNA splicing endonuclease : insight into the evolution of a novel three-unit composition and a unique loop involved in broad substrate specificity2012

    • Author(s)
      A. Hirata, K. Fujishima, R. Yamagami, T. Kawamura, J. F. Banfield, A. Kanai, and H. Hori
    • Journal Title

      Nucleic Acids Res.

      Volume: 40 Pages: 10554-10566

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] The 2'-O-methylation status of a single guanosine controls transfer RNA-mediated Toll-like receptor 7 activation or inhibition2012

    • Author(s)
      S. Jöckel, G. Nees, R. Sommer, Y. Zhao, D. Cherkasov, H. Hori, G. Ehm, M. Schnare, M. Nain, A. Kaufmann, and S. Bauer
    • Journal Title

      J. Exp. Med

      Volume: 209 Pages: 235-241

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] X-ray structure of the fourth type of archaeal tRNA splicing endonuclease: insight into the evolution of a novel three-unit composition and a unique loop involved in broad substrate specificity.2012

    • Author(s)
      A. Hirata, K. Fujishima, R. Yamagami, T. Kawamura, J. F. Banfield, A. Kanai, and H. Hori
    • Journal Title

      Nucleic Acids Res.

      Volume: 40 Issue: 20 Pages: 10554-10566

    • DOI

      10.1093/nar/gks826

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO)2012

    • Author(s)
      Yamagami R, Yamashita K, Nishimasu H, Tomikawa C, Ochi A, Iwashita C, Hirata A, Ishitani R, Nureki O, Hori H
    • Journal Title

      J Biol Chem

      Volume: 287 Issue: 51 Pages: 42480-42480

    • DOI

      10.1074/jbc.m112.390112

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The 2'-O-methylation status of a single guanosine controls transfer RNA-mediated Toll-like receptor 7 activation or inhibition2012

    • Author(s)
      S.Jockel, G.Nees, R.Sommer, Y.Zhao, D.Cherkasov, H.Hon, G.Ehm, M.Schnare, M.Nain, A.Kaufmann, S.Bauer
    • Journal Title

      J.Exp.Med.

      Volume: 209 Issue: 2 Pages: 235-241

    • DOI

      10.1084/jem.20111075

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Substrate tRNA recognition mechanism of a multi-site-specific tRNA methyltransferase, Aquifex aeolicus Trm1, based on the X-ray crystal structure2011

    • Author(s)
      T. Awai, A. Ochi, Ihsanawati, T. Sengoku, A. Hirata, Y. Bessho, S. Yokoyama, and H. Hori
    • Journal Title

      J. Biol. Chem

      Volume: 286 Pages: 35236-35246

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cleavage of intron from the standard or non-standard position of the precursor tRNA by the splicing endonuclease of Aeropyrum pernix, a hyper-thermophilic Crenarchaeon, involves a novel RNA recognition site in the Crenarchaea specific loop2011

    • Author(s)
      A. Hirata, T. Kitajima, and H. Hori
    • Journal Title

      Nucleic Acids Res.

      Volume: 39 Pages: 9376-9389

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Pseudouridine at position 55 (Ψ55) in tRNA controls the contents of other modified nucleotides for low-temperature adaptation in the extreme-thermophilic eubacterium Thermus thermophilus2011

    • Author(s)
      K. Ishida, T. Kunibayashi, C. Tomikawa, A. Ochi, T. Kanai, A. Hirata, C. Iwashita, and H. Hori
    • Journal Title

      Nucleic Acids Res.

      Volume: 39 Pages: 2304-2318

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cleavage of intron from the standard or non-standard position of the precursor tRNA by the splicing endonuclease of Aeropyrum pernix, a hyper-thermophilic Crenarchaeon, involves a novel RNA recognition site in the Crenarchaea specific loop2011

    • Author(s)
      A.Hirata, T.Kitajima, H.Hori
    • Journal Title

      Nucleic Acids Res

      Volume: 39 Issue: 21 Pages: 9376-9389

    • DOI

      10.1093/nar/gkr615

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Substrate tRNA recognition mechanism of a multisite-specific tRNA methyltransferase, Aquifex aeolicus Trm1, based on the X-ray crystal structure2011

    • Author(s)
      Awai T., et al
    • Journal Title

      J Biol Chem

      Volume: 286 Issue: 40 Pages: 35236-35246

    • DOI

      10.1074/jbc.m111.253641

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] 超好熱性アーキアThermococcus kodakarensis由来tRNATrpの修飾ヌクレオシド分析2013

    • Author(s)
      前田雄太, 平田 章, 長野倫子, 土手智裕, 鈴木健夫, 金井保, 鈴木勉, 堀弘幸
    • Organizer
      2013年度極限環境生物学会年会
    • Place of Presentation
      明治大学生田キャンパス
    • Year and Date
      2013-10-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Thermococcus kodakarensis 由来tRNAメチル化酵素(Trm-m22G10)の構造機能解析2013

    • Author(s)
      西山聖示, 平田章, 田村俊浩, 堀 弘幸
    • Organizer
      2013年度極限環境生物学会年会
    • Place of Presentation
      明治大学生田キャンパス
    • Year and Date
      2013-10-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Does D20 formation by eubacterial dihydrouridine synthase require the other modified nucleotides for its modification in tRNA?2013

    • Author(s)
      楠葉浩晃, 吉田剛士, 岩崎絵梨, 粟井貴子, 平田章, 冨川千恵, 山上龍太, 堀弘幸
    • Organizer
      第3回モデル生物丸ごと一匹学会年会
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2013-09-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Eukaryotic tRNA (m2G10) methyltransferase (Trm11-Trm112) recognizes the whole structure of tRNA2013

    • Author(s)
      Shiho Ohmori, Yu Nishida, Kazuki Okada, Akira Hirata, and Hiroyuki Hori
    • Organizer
      第3回モデル生物丸ごと一匹学会年会
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2013-09-21
    • Related Report
      2013 Final Research Report
  • [Presentation] 固相化DNAプローブ法を用いた好熱菌tRNAの大量精製法の確立2013

    • Author(s)
      Ai Kazayama, Ryota Yamagami, Takashi Yokogawa, and Hiroyuki Hori
    • Organizer
      第3回モデル生物丸ごと一匹学会年会
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2013-09-21
    • Related Report
      2013 Final Research Report
  • [Presentation] 葉酸依存性tRNA(m5U54)メチル化酵素TrmFOはどうやってtRNA中のU54を認識しているのか?2013

    • Author(s)
      山上龍太, 山下光輝, 西増弘志, 冨川千恵, 越智杏奈, 岩下智香子, 平田章, 石谷隆一郎, 濡木理, 堀 弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Year and Date
      2013-07-24
    • Related Report
      2013 Final Research Report
  • [Presentation] m7G46およびΨ55を中心としたThermus thermophilustRNA修飾ネットワーク2013

    • Author(s)
      冨川千恵, 石田一雄, 国林貴史, 金井保, 横川隆志, 堀弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Year and Date
      2013-07-24
    • Related Report
      2013 Final Research Report
  • [Presentation] 熱ストレスによる開始tRNAMetの細胞内動態2013

    • Author(s)
      渡邉和則, 宮川隆, 冨川千恵, 水野利恵, 高橋昭久, 大槻高史, 堀弘幸, 井尻憲一
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Year and Date
      2013-07-24
    • Related Report
      2013 Final Research Report
  • [Presentation] 真正細菌ジヒドロウリジン合成酵素はD20形成にtRNA上の他の修飾ヌクレオチドを必要とする2013

    • Author(s)
      楠葉浩晃, 吉田剛士, 岩崎絵梨, 粟井貴子, 平田章, 冨川千恵, 山上龍太, 堀弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Year and Date
      2013-07-24
    • Related Report
      2013 Final Research Report
  • [Presentation] Thermoplasma acidophilum 由来tRNALeuにおいてArchaeosine が2カ所に形成されるメカニズムの解析2013

    • Author(s)
      河村卓哉, 冨川千恵, 大平高之 , 井上仁, 行木信一, 岡夏央, 谷口浩輝, 安藤香織, 大野敏, 山岸明彦, 鈴木勉, 横川隆志, 堀弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Year and Date
      2013-07-24
    • Related Report
      2013 Final Research Report
  • [Presentation] 超好熱性アーキアThermococcus kodakarensis 2´-5´RNAリガーゼの機能解析2013

    • Author(s)
      平田章, 長野倫子, 石丸雄基, 金井保, 鈴木健夫, 佐藤朝子, 金井昭夫, 鈴木勉, 堀弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Year and Date
      2013-07-24
    • Related Report
      2013 Final Research Report
  • [Presentation] Yeast tRNA (m2G10) methyltransferase (Trm11-Trm112)の基質認識機構の解明2013

    • Author(s)
      大森志穂, 西田裕, 岡田和樹, 平田章, 堀弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Year and Date
      2013-07-24
    • Related Report
      2013 Final Research Report
  • [Presentation] 極小アーキア(古細菌)における4番目のタイプtRNAスプライシングエンドヌクレアーゼのX線結晶構造2013

    • Author(s)
      平田章, 藤島皓介, 山上龍太, 河村卓哉, Jillina F. Banfield, 金井昭夫, 堀弘幸
    • Organizer
      第13回蛋白質科学会
    • Place of Presentation
      鳥取
    • Year and Date
      2013-06-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Prediction of genes for tRNA modifications in the thermoacidophilic archaeon, Thermoplasma acidophilum2013

    • Author(s)
      Ryo Anraku, Miyu Higashiguchi, Takuya Kawamura, and Hiroyuki Hori
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Final Research Report
  • [Presentation] Alteration of solid-phase DNA probe method for large-scale tRNA purification2013

    • Author(s)
      Ai Kazayama, Ryota Yamagami, Takashi Yokogawa, and Hiroyuki Hori
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Final Research Report
  • [Presentation] Novel tRNA modifications in the thermophilic-acidophilic archaeon, Thermoplasma acidophilum2013

    • Author(s)
      Chie Tomikawa, Takayuki Ohira, Yasushi Inoue, Takuya Kawamura, Akihiko Yamagishi, Tsutomu Suzuki, and Hiroyuki Hori
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Final Research Report
  • [Presentation] X-ray crystal structure of the fourth type of tRNA splicing endonuclease from an uncultivated archaeon Candidatus Micrarchaeum acidiphilum (ARMAN-2)2013

    • Author(s)
      Akira Hirata, Kosuke Fujishima, Ryota Yamagami, Takuya Kawamura, Jillian F. Banfiled, Akio Kanai and Hiroyuki Hori
    • Organizer
      Thermophiles 2013
    • Place of Presentation
      Deutschland
    • Related Report
      2013 Final Research Report
  • [Presentation] The synthesis mechanism of a tRNA modification in thermophilic bacteria2013

    • Author(s)
      Takuya Kawamura, Chie Tomikawa, Takayuki Ohira, Yasushi Inoue, Nobukazu Nameki, Natsuhisa Oka, Hiroki Taniguchi, Kaori Ando, Satoshi Ohno, Akihiko Yamagishi, Tsutom Suzuki, Takashi Yokogawa, and Hiroyuki Hori
    • Organizer
      Riboclub 2013 Annual Meeting
    • Place of Presentation
      Canada
    • Related Report
      2013 Final Research Report
  • [Presentation] 極小アーキア(古細菌)における4番目のタイプtRNAスプライシングエンドヌクレアーゼのX線結晶構造2013

    • Author(s)
      平田 章、藤島皓介、山上龍太、河村卓哉、Jillina F. Banfield、金井昭夫、堀 弘幸
    • Organizer
      第13回蛋白質科学会
    • Place of Presentation
      鳥取
    • Related Report
      2013 Annual Research Report
  • [Presentation] The synthesis mechanism of a tRNA modification in thermophilic bacteria2013

    • Author(s)
      Takuya Kawamura, Chie Tomikawa, Takayuki Ohira, Yasushi Inoue, Nobukazu Nameki, Natsuhisa Oka, Hiroki Taniguchi, Kaori Ando, Satoshi Ohno, Akihiko Yamagishi, Tsutom Suzuki, Takashi Yokogawa, and Hiroyuki Hori
    • Organizer
      Riboclub 2013 Annual Meeting, Canada
    • Place of Presentation
      ケベック、カナダ
    • Related Report
      2013 Annual Research Report
  • [Presentation] X-ray crystal structure of the fourth type of tRNA splicing endonuclease from an uncultivated archaeon Candidatus Micrarchaeum acidiphilum (ARMAN-2)2013

    • Author(s)
      Akira Hirata, Kosuke Fujishima, Ryota Yamagami, Takuya Kawamura, Jillian F. Banfiled, Akio Kanai and Hiroyuki Hori
    • Organizer
      Thermophiles 2013
    • Place of Presentation
      レジェンスブルク、ドイツ
    • Related Report
      2013 Annual Research Report
  • [Presentation] Novel tRNA modifications in the thermophilic-acidophilic archaeon, Thermoplasma acidophilum2013

    • Author(s)
      Chie Tomikawa, Takayuki Ohira, Yasushi Inoue, Takuya Kawamura, Akihiko Yamagishi, Tsutomu Suzuki, and Hiroyuki Hori
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Annual Research Report
  • [Presentation] Alteration of solid-phase DNA probe method for large-scale tRNA purification2013

    • Author(s)
      Ai Kazayama, Ryota Yamagami, Takashi Yokogawa, and Hiroyuki Hori
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Annual Research Report
  • [Presentation] Prediction of genes for tRNA modifications in the thermoacidophilic archaeon, Thermoplasma acidophilum2013

    • Author(s)
      Ryo Anraku, Miyu Higashiguchi, Takuya Kawamura, and Hiroyuki Hori
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Annual Research Report
  • [Presentation] Substrate transfer RNA recognition mechanism of tRNA (m5U54) methyltransferase (TrmFO) based on the biochemical and structural analysis.2012

    • Author(s)
      R. Yamagami, K. Yamashita, H. Nishimasu, C. Iwashita, A. Hirata, O. Nureki, and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      SPring-8 (Harima)
    • Year and Date
      2012-09-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI)2012

    • Author(s)
      H. Takuma, M. Minoji, N. Ushio, C. Tomikawa, A. Hirata, A. Ochi and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      SPring-8 (Harima)
    • Year and Date
      2012-09-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Functional analysis of yeast tRNA (m2G10) methyltransferase (Trm11-Trm112)2012

    • Author(s)
      Y. Nishida, K. Okada, A. Hirata, and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      SPring-8 (Harima)
    • Year and Date
      2012-09-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Adaptation of Thermus thermophilus to environmental temperature via tRNA modification enzymes-modified nucleotides network in tRNA2012

    • Author(s)
      C. Tomikawa, K. Ishida, T. Kunibayashi, A. Ochi, T. Kanai, A. Hirata, C. Iwashita, and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      SPring-8 (Harima)
    • Year and Date
      2012-09-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Visiting Yellowstone National Park, the place of discovery of thermophiles2012

    • Author(s)
      H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      SPring-8 (Harima)
    • Year and Date
      2012-09-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Transfer RNA modifications in thermophilic bacteria2012

    • Author(s)
      T. Kawamura, C. Tomikawa, T. Ohira, Y. Inoue, A. Yamagishi, T. Suzuki, and H. Hori
    • Organizer
      9th Extremophiles 2012
    • Place of Presentation
      Spain
    • Year and Date
      2012-09-09
    • Related Report
      2013 Final Research Report
  • [Presentation] Transfer RNA recognition mechanism of Thermus thermophilus folate/FAD-dependent tRNA methyltransferase (TrmFO)2012

    • Author(s)
      R. Yamagami, K. Yamashita, H. Nishimasu, C. Tomikawa, A. Ochi, C. Iwashita, A. Hirata, R. Ishitani, O. Nureki, and H. Hori
    • Organizer
      9th Extremophiles 2012
    • Place of Presentation
      Spain
    • Year and Date
      2012-09-09
    • Related Report
      2013 Final Research Report
  • [Presentation] Structural insight into the evolution and broad substrate specificity of the fourth type of tRNA splicing endonuclease2012

    • Author(s)
      A. Hirata, K. Fujishima, R. Yamagami, T. Kawamura, J. F. Banfiled, A. Kanai, and H. Hori
    • Organizer
      9th Extremophiles 2012
    • Place of Presentation
      Spain
    • Year and Date
      2012-09-09
    • Related Report
      2013 Final Research Report
  • [Presentation] 極小アーキアにおけるtRNAスプライシングエンドヌクレアーゼの構造機能解析2012

    • Author(s)
      平田章, 藤島皓介, 山上龍太, 河村卓哉, J. F. Banfield, 堀弘幸
    • Organizer
      第25回日本アーキア研究会
    • Place of Presentation
      兵庫
    • Year and Date
      2012-07-18
    • Related Report
      2013 Final Research Report
  • [Presentation] tRNA modifications in Thermoplasma acidophilum2012

    • Author(s)
      T. Kawamura, C. Tomikawa, T. Ohira, Y. Inoue, A. Yamagishi, T. Suzuki, and H. Hori
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Year and Date
      2012-07-16
    • Related Report
      2013 Final Research Report
  • [Presentation] サーマス・サーモフィラス由来tRNAメチル化酵素TrmFOの基質認識機構2012

    • Author(s)
      山上龍太, 山下光輝, 西増弘志, 冨川千恵, 越智杏奈, 岩下智香子, 平田章, 石谷隆一郎, 濡木理, 堀弘幸
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Year and Date
      2012-07-16
    • Related Report
      2013 Final Research Report
  • [Presentation] 高度好熱菌tRNA中のシュードウリジン55修飾は, 温度変化への適応因子として機能する2012

    • Author(s)
      冨川千恵, 石田一雄, 国林貴史, 越智杏奈, 金井保, 平田章, 岩下知香子, 堀弘幸
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Year and Date
      2012-07-16
    • Related Report
      2013 Final Research Report
  • [Presentation] RNA修飾成熟マシナリーの構造と機能2012

    • Author(s)
      堀弘幸
    • Organizer
      第3回愛媛大学学術フォーラム
    • Place of Presentation
      愛媛県松山市
    • Year and Date
      2012-01-06
    • Related Report
      2011 Annual Research Report
  • [Presentation] tRNA modifications in thermoacidophilic archaeon2012

    • Author(s)
      T. Kawamura, C. Tomikawa, T. Ohira, Y. Inoue, A. Yamagishi, T. Suzuki, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
  • [Presentation] 酵母由来のtRNA (m2G10) methyltransferase (Trm11-Trm112)の基質認識機構の解明2012

    • Author(s)
      西田裕, 岡田和樹, 平田章, 堀弘幸
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
  • [Presentation] Expression and purification of yeast tRNA (Cm32/Gm34) methyltransferase (Trm7)2012

    • Author(s)
      K. Yoshii, A. Hirata, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
  • [Presentation] Structural and functional analyses of archaeal 2'-5' RNA ligase2012

    • Author(s)
      T. Nagano, A. Hirata, Y. Ishimaru, T. Kanai, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
  • [Presentation] Research for substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI)2012

    • Author(s)
      H. Takuma, M. Minoji, N. Ushio, C. Tomikawa, A. Hirata, A. Ochi and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
  • [Presentation] Improvement of a protein purification method for nucleic acid-free in the case of recombinant tRNA (N2, N2-guanine)-dimethyltransferase (Trm1) from Aquifex aeolicus2012

    • Author(s)
      S. Nishiyama, A. Hirata, T. Awai, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2013 Final Research Report
  • [Presentation] Negative control of Gm18, m5s2U54 and m1A58 modifications by pseudouridine55 modification in Thermus thermophilus tRNAs : the tRNA modification network in extreme thermophile2012

    • Author(s)
      C. Tomikawa, K. Ishida, T. Kunibayashi, A. Ochi, T. Kanai, A. Hirata, C. Iwashita, and H. Hori
    • Organizer
      24th tRNA workshop
    • Place of Presentation
      Chilli
    • Related Report
      2013 Final Research Report
  • [Presentation] Thermus thermophilus tRNA (m1A58) methyltransferase [Trm1]の基質認識メカニズムの解明2011

    • Author(s)
      詫間浩之, 美濃地真之, 牛尾なつみ, 冨川千恵, 平田章, 堀弘幸
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-16
    • Related Report
      2013 Final Research Report
  • [Presentation] 酵母由来のtRNA (m2G10) methyltransferase (Trm11-Trm112)の機能解析2011

    • Author(s)
      西田裕, 岡田和樹, 平田章, 堀弘幸
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-16
    • Related Report
      2013 Final Research Report
  • [Presentation] 超好熱性古細菌Thermococcus kodakaraensis由来tRNA(m2G10/m22G10) methyltransferase (TK0981)の酵素学的性質の決定2011

    • Author(s)
      田村俊浩, 平田章, 堀弘幸
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-16
    • Related Report
      2013 Final Research Report
  • [Presentation] サーマス・サーモフィラス由来葉酸依存性tRNA(m5U54)メチル化酵素の基質認識機構2011

    • Author(s)
      山上龍太, 山下光輝, 西増弘志, 岩下知香子, 平田章, 濡木理, 堀弘幸
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-16
    • Related Report
      2013 Final Research Report
  • [Presentation] Thermus thermophilus tRNA (m1A58) methyltransferase[Trm1]の基質認識メカニズムの解明2011

    • Author(s)
      詫間浩之、美濃地真之、牛尾なつみ、冨川千恵、平田 章、堀弘幸
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2011-12-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] 酵母由来のtRNA (m2G10) methyltransferase (Trm11-Trm112)の機能解析2011

    • Author(s)
      西田裕、岡田和樹、平田章、堀弘幸
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2011-12-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] サーマス・サーモフィラス由来葉酸依存性tRNA (m5U54)メチル化酵素の基質認識機構2011

    • Author(s)
      山上龍太、山下光輝、西増弘志、岩下知香子、平田章、濡木理、堀弘幸
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2011-12-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] アーキアにおける2'-5' RNA ligaseの構造機能解析2011

    • Author(s)
      長野倫子、石丸雄基、金井保、平田章、堀弘幸
    • Organizer
      第12会極限環境生物学会年会
    • Place of Presentation
      長崎
    • Year and Date
      2011-11-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] アーキアRNAポリメラーゼのサブユニットDに見られる特異的ドメイン構造と機能の多様性と進化2011

    • Author(s)
      平田章、堀弘幸、村上勝彦、Faith H.Lessner、Matthew Jenning、Eduardus, C.Duin、Daniel J.Lessner
    • Organizer
      第12会極限環境生物学会年会
    • Place of Presentation
      長崎
    • Year and Date
      2011-11-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] Substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI)2011

    • Author(s)
      Hiroyuki Takuma, Masayuki Minoji, Natsumi Ushio, Chie Tomikawa, Akira Hirata, Anna Ochi, Hiroyuki Hori
    • Organizer
      The 38th International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      札幌
    • Year and Date
      2011-11-11
    • Related Report
      2011 Annual Research Report
  • [Presentation] RNA修飾酵素の触媒機構の多様性とそのネットワークの環境応答2011

    • Author(s)
      堀弘幸
    • Organizer
      北海道大学グローバルCOE物質科学イノベーション講演会
    • Place of Presentation
      札幌
    • Year and Date
      2011-11-08
    • Related Report
      2011 Annual Research Report
  • [Presentation] Transfer RNA modifications in Thermoplasma acidophilum2011

    • Author(s)
      T. Kawamura, C. Tomikawa, T. Ohira, Y. Inoue, A. Yamagishi, T. Suzuki, and H. Hori
    • Organizer
      Thermophiles 2011
    • Place of Presentation
      Big Sky, Montana, USA
    • Year and Date
      2011-09-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Recognition and cleavage of intron in precursor tRNA by the splicing endonuclease from Aperopyrum pernix, an aerobic hyper-thermophilic Crenarchaeon, thorough a novel RNA recognition site in Crenarchaea specific loop2011

    • Author(s)
      A. Hirata, T. Kitajima, and H. Hori
    • Organizer
      Thermophiles 2011
    • Place of Presentation
      Big Sky, Montana, USA
    • Year and Date
      2011-09-12
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] Relationship between 5-methyluridine modification at position 54 in tRNA and tRNA modification network in Thermus thermophiles2011

    • Author(s)
      R. Yamagami, N. Shigi, S.-I. Asai, K. Watanabe, and H. Hori
    • Organizer
      Thermophiles 2011
    • Place of Presentation
      Big Sky, Montana, USA
    • Year and Date
      2011-09-12
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] Structural and functional analyses of archaeal 2'-5' RNA ligase2011

    • Author(s)
      T. Nagano, A. Hirata, Y. Ishimaru, T. Kanai, and H. Hori
    • Organizer
      Thermophiles 2011
    • Place of Presentation
      Big Sky, Montana, USA
    • Year and Date
      2011-09-12
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] Multisite specific tRNA methyltransferase Trm1 from a hyper-thermophilic eubacterium, Aquifex aeolicus2011

    • Author(s)
      T. Awai, A. Ochi, Ihsanawati, T. Sengoku, S. Kimura, C. Tomikawa, T. Yokogawa, A. Hirata, Y. Bessho, T. Suzuki, S. Yokoyama and H. Hori
    • Organizer
      Thermophiles 2011
    • Place of Presentation
      Big Sky, Montana, USA
    • Year and Date
      2011-09-12
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] Transfer RNA modification in Thermoplasma acidophilum2011

    • Author(s)
      T.Kawamura, C.Tomikawa, T.Ohira, Y.Inoue, A.Yamagishi, T.Suzuki, H.Hori
    • Organizer
      Thermophiles 2011
    • Place of Presentation
      Big Sky, Montana, USA
    • Year and Date
      2011-09-12
    • Related Report
      2011 Annual Research Report
  • [Presentation] 酵母由来のtRNA (m2G10) methyltransferase (Trm11-Trm112)の機能解析2011

    • Author(s)
      西田裕, 岡田和樹, 平田章, 堀弘幸
    • Organizer
      RNAフロンティアミーティング
    • Place of Presentation
      大府(愛知)
    • Year and Date
      2011-08-30
    • Related Report
      2013 Final Research Report
  • [Presentation] 古細菌における2' - 5' RNA ligaseの構造機能解析2011

    • Author(s)
      長野倫子, 平田章, 石丸雄基, 金井保, 堀弘幸
    • Organizer
      RNAフロンティアミーティング
    • Place of Presentation
      大府(愛知)
    • Year and Date
      2011-08-30
    • Related Report
      2013 Final Research Report
  • [Presentation] 酵母由来のtRNA (m^2G10) methyltransferase (Trm11-Trm112)の機能解析2011

    • Author(s)
      芦田裕、岡田和樹、平田章、堀弘幸
    • Organizer
      RNAフロンティアミーティング
    • Place of Presentation
      愛知県大府市
    • Year and Date
      2011-08-30
    • Related Report
      2011 Annual Research Report
  • [Presentation] 古細菌における2'-5' RNA ligaseの構造機能解析2011

    • Author(s)
      長野倫子, 平田章, 石丸雄基, 金井保, 堀弘幸
    • Organizer
      RNAフロンティアミーティング
    • Place of Presentation
      愛知県大府市
    • Year and Date
      2011-08-30
    • Related Report
      2011 Annual Research Report
  • [Presentation] Elucidation of substrate tRNA recognition mechanism by tRNA (m1A58) methyltransferase[TrmI] from Thermus thermophiles2011

    • Author(s)
      H. Takuma, M. Minoji, N. Ushio, C. Tomikawa, A. Hirata, C. Iwashita, A. Ochi, and H. Hori
    • Organizer
      第1回モデル生物丸ごと一匹学会・第10回高度好熱菌連携会議
    • Place of Presentation
      理研・播磨(Spring-8)
    • Year and Date
      2011-08-19
    • Related Report
      2013 Final Research Report
  • [Presentation] The crystal structure analysis and establishment of activity mesurement system of Thermus thermophilus tRNA (Um34, Cm34) methyltransferase [YibK]2011

    • Author(s)
      T. Matsugi, A. Hirata, and H. Hori
    • Organizer
      第1回モデル生物丸ごと一匹学会・第10回高度好熱菌連携会議
    • Place of Presentation
      理研・播磨(Spring-8)
    • Year and Date
      2011-08-19
    • Related Report
      2013 Final Research Report
  • [Presentation] Elucidation of substrate tRNA recognition mechanism by tRNA (m^1A58)methyltransferase[TrmI]from Thermus thermophiles2011

    • Author(s)
      H.Takuma, M.Minoji, N.Ushio, C.Tomikawa, A.Hirata, C.Iwashita, A.Ochi, H.Hori
    • Organizer
      第1回モデル生物丸ごと一匹学会・第10回高度好熱菌連携会議
    • Place of Presentation
      兵庫県佐用郡
    • Year and Date
      2011-08-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] The crystal structure analysis and establishment of activity mesurement system of Thermus thermophilus tRNA(Um34, Cm34) methyltransferase[YibK]2011

    • Author(s)
      T.Matsugi, A.Hirata, H.Hori
    • Organizer
      第1回モデル生物丸ごと一匹学会・第10回高度好熱菌連携会議
    • Place of Presentation
      兵庫県佐用郡
    • Year and Date
      2011-08-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] Substrate tRNA recognition mechanism of FAD/folate-dependet tRNA m5U54 methyltransferase TrmFO2011

    • Author(s)
      R. Yamagami, K. Yamashita, H. Nishimasu, C. Iwashita, A. Hirata, O. Nureki, and H. Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 2011Kyoto)
    • Place of Presentation
      Kyoto
    • Year and Date
      2011-06-16
    • Related Report
      2013 Final Research Report
  • [Presentation] Regulation of tRNA modification network by pseudouridine 55 in Thermus thermophiles2011

    • Author(s)
      C. Tomikawa, K. Ishida, T. Kunibayashi, A. Ochi, T. Kanai, A. Hirata, C. Iwashita, and H. Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 2011Kyoto)
    • Place of Presentation
      Kyoto
    • Year and Date
      2011-06-16
    • Related Report
      2013 Final Research Report
  • [Presentation] A conserved Lys residue in Crenarchaea specific loop determines a broad substratespecificity of Crenarchaeal RNA splicing endonuclease2011

    • Author(s)
      A. Hirata, T. Kitajima, and H. Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 2011Kyoto)
    • Place of Presentation
      Kyoto
    • Year and Date
      2011-06-16
    • Related Report
      2013 Final Research Report
  • [Presentation] Transfer RNA recognition mechanism of multi-site specific tRNA methyltransferase (Trm1) from Aquifex aeolicus2011

    • Author(s)
      T. Awai, A. Ochi, Ihsanawati, A. Hirata, Y. Bessho, S. Yokoyama, and H. Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 2011Kyoto)
    • Place of Presentation
      Kyoto
    • Year and Date
      2011-06-16
    • Related Report
      2013 Final Research Report
  • [Presentation] Substrate tRNA recognition mechanism of FAD/folate-dependet tRNA m^5U54 methyltransferase TrmFO2011

    • Author(s)
      R.Yamagami, K.Yamashita, H.Nishimasu, C.Iwashita, A.Hirata, O.Nureki, H.Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 20-11Kyoto)
    • Place of Presentation
      京都
    • Year and Date
      2011-06-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Regulation of tRNA modification network by pseudouridine 55 in Thermus thermophiles2011

    • Author(s)
      C.Tomikawa, K.Ishida, T.Kunibayashi, A.Ochi, T.Kanai, A.Hirata, C.Iwashita, H.Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 2011Kyoto)
    • Place of Presentation
      京都
    • Year and Date
      2011-06-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] A conserved Lys residue in Crenarchaea specific loop determines a broad substratespecificity of Crenarchaeal RNA splicing endonuclease2011

    • Author(s)
      A.Hirata, T.Kitajima, H.Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 2011Kyoto)
    • Place of Presentation
      京都
    • Year and Date
      2011-06-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Transfer RNA recognition mechanism of multi-site specific tRNA methyltransferase (Trm1)from Aquifex aeolicus2011

    • Author(s)
      T.Awai, A.Ochi, Ihsanawati, A.Hirata, Y.Bessho, S.Yokoyama, H.Hori
    • Organizer
      16th Annual Meeting of RNA Society (RNA 2011Kyoto)
    • Place of Presentation
      京都
    • Year and Date
      2011-06-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] アーキアにおける2'-5' RNA ligaseの構造機能解析2011

    • Author(s)
      長野倫子, 石丸雄基, 金井保, 平田章, 堀弘幸
    • Organizer
      第12回極限環境生物学会年会
    • Place of Presentation
      長崎
    • Related Report
      2013 Final Research Report
  • [Presentation] Substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI)2011

    • Author(s)
      Hiroyuki Takuma, Masayuki Minoji, Natsumi Ushio, Chie Tomikawa, Akira Hirata, Anna Ochi, and Hiroyuki Hori
    • Organizer
      The 38th International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      Sapporo
    • Related Report
      2013 Final Research Report
  • [Presentation] Yeast tRNA (m2G10) methyltransferase (Trm11-Trm112)の基質認識機構の解明

    • Author(s)
      大森志穂、西田 裕、岡田和樹、平田 章、堀 弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 超好熱性アーキアThermococcus kodakarensis 2', 5'- RNA リガーゼの機能解析

    • Author(s)
      平田 章、長野倫子、石丸雄基、金井 保、鈴木健夫、佐藤朝子、金井昭夫、鈴木 勉、堀 弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report
  • [Presentation] Thermoplasma acidophilum由来tRNALeuにおいてArchaeosineが2カ所に形成されるメカニズムの解析

    • Author(s)
      河村卓哉, 冨川千恵, 大平高之, 井上 仁, 行木信一, 岡 夏央, 谷口浩輝, 安藤香織, 大野 敏,山岸明彦, 鈴木 勉, 横川隆志, 堀 弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 真正細菌ジヒドロウリジン合成酵素はD20形成にtRNA上の他の修飾ヌクレオチドを必要とする

    • Author(s)
      楠葉浩晃、吉田剛士、岩崎絵梨、粟井貴子、平田 章、冨川千恵、
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 熱ストレスによる開始tRNAMetの細胞内動態

    • Author(s)
      渡邉和則、宮川 隆、冨川千恵、水野利恵、高橋昭久、大槻高史、堀弘幸、井尻憲一
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report
  • [Presentation] m7G46およびΨ55を中心としたThermus thermophilus tRNA修飾ネットワーク

    • Author(s)
      冨川千恵、石田一雄、国林貴史、金井 保、横川隆志、堀 弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 葉酸依存性tRNA(m5U54)メチル化酵素TrmFOはどうやってtRNA中のU54を認識しているのか?

    • Author(s)
      山上龍太, 山下光輝, 西増弘志, 冨川千恵, 越智杏奈, 岩下智香子, 平田 章, 石谷隆一郎, 濡木 理, 堀 弘幸
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 固相化DNAプローブ法を用いた好熱菌tRNAの大量精製法の確立

    • Author(s)
      Ai Kazayama, Ryota Yamagami, Takashi Yokogawa, and Hiroyuki Hori
    • Organizer
      第3回モデル生物丸ごと一匹学会年会
    • Place of Presentation
      大阪
    • Related Report
      2013 Annual Research Report
  • [Presentation] Eukaryotic tRNA (m2G10) methyltransferase (Trm11-Trm112) recognizes the whole structure of tRNA

    • Author(s)
      Shiho Ohmori, Yu Nishida, Kazuki Okada, Akira Hirata, and Hiroyuki Hori
    • Organizer
      第3回モデル生物丸ごと一匹学会年会
    • Place of Presentation
      大阪
    • Related Report
      2013 Annual Research Report
  • [Presentation] Does D20 formation by eubacterial dihydrouridine synthase require the other modified nucleotides for its modification in tRNA?

    • Author(s)
      楠葉浩晃、吉田剛士、岩崎絵梨、粟井貴子、平田 章、冨川千恵、山上龍太、堀 弘幸
    • Organizer
      第3回モデル生物丸ごと一匹学会年会
    • Place of Presentation
      大阪
    • Related Report
      2013 Annual Research Report
  • [Presentation] Thermococcus kodakarensis 由来tRNA メチル化酵素(Trm- m22G10)の構造機能解析

    • Author(s)
      西山聖示、平田 章、田村俊浩、堀 弘幸
    • Organizer
      2013年度極限環境生物学会年会
    • Place of Presentation
      明治大学生田キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] 超好熱性アーキア Thermococcus kodakarensis 由来 tRNATrp の

    • Author(s)
      前田雄太、平田 章、長野倫子、土手智裕、鈴木健夫、金井 保、鈴木 勉、堀 弘幸
    • Organizer
      2013年度極限環境生物学会年会
    • Place of Presentation
      明治大学生田キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] 高度好熱菌tRNA中のシュードウリジン55修飾は、温度変化への適応因子として機能する

    • Author(s)
      冨川千恵,石田一雄,国林貴史,越智杏奈,金井 保,平田 章,岩下知香子,堀 弘幸
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2012 Annual Research Report
  • [Presentation] サーマス・サーモフィラス由来tRNA メチル化酵素TrmFOの基質認識機構

    • Author(s)
      山上龍太,山下光輝,西増 弘志,冨川 千恵,越智 杏奈,岩下 智香子,平田 章,石谷隆一郎,濡木 理,堀  弘幸
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2012 Annual Research Report
  • [Presentation] tRNA modifications in Thermoplasma acidophilum

    • Author(s)
      T. Kawamura, C. Tomikawa, T. Ohira, Y. Inoue, A. Yamagishi, T. Suzuki, and H. Hori
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2012 Annual Research Report
  • [Presentation] 極小アーキアにおけるtRNAスプライシングエンドヌクレアーゼの構造機能解析

    • Author(s)
      平田 章,藤島皓介,山上龍太,河村卓哉,J. F. Banfield,堀 弘幸
    • Organizer
      第25回日本アーキア研究会
    • Place of Presentation
      兵庫
    • Related Report
      2012 Annual Research Report
  • [Presentation] Structural insight into the evolution and broad substrate specificity of the fourth type of tRNA splicing endonuclease

    • Author(s)
      A. Hirata, K. Fujishima, R. Yamagami, T. Kawamura, J. F. Banfiled, A. Kanai, and H. Hori
    • Organizer
      9th Extremophiles 2012
    • Place of Presentation
      スペイン
    • Related Report
      2012 Annual Research Report
  • [Presentation] Transfer RNA recognition mechanism of Thermus thermophilus folate/FAD-dependent tRNA methyltransferase (TrmFO)

    • Author(s)
      R. Yamagami, K. Yamashita, H. Nishimasu, C. Tomikawa, A. Ochi, C. Iwashita, A. Hirata, R. Ishitani, O. Nureki, and H. Hori
    • Organizer
      9th Extremophiles 2012
    • Place of Presentation
      スペイン
    • Related Report
      2012 Annual Research Report
  • [Presentation] Transfer RNA modifications in thermophilic bacteria

    • Author(s)
      T. Kawamura, C. Tomikawa, T. Ohira, Y. Inoue, A. Yamagishi, T. Suzuki, and H. Hori
    • Organizer
      9th Extremophiles 2012
    • Place of Presentation
      スペイン
    • Related Report
      2012 Annual Research Report
  • [Presentation] Adaptation of Thermus thermophilus to environmental temperature via tRNA modification enzymes-modified nucleotides network in tRNA

    • Author(s)
      C. Tomikawa, K. Ishida, T. Kunibayashi, A. Ochi, T. Kanai, A. Hirata, C. Iwashita, and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      兵庫
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Functional analysis of yeast tRNA (m2G10) methyltransferase (Trm11-Trm112)

    • Author(s)
      Y. Nishida, K. Okada, A. Hirata, and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      兵庫
    • Related Report
      2012 Annual Research Report
  • [Presentation] Substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI)

    • Author(s)
      H. Takuma, M. Minoji, N. Ushio, C. Tomikawa, A. Hirata, A. Ochi and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      兵庫
    • Related Report
      2012 Annual Research Report
  • [Presentation] Substrate transfer RNA recognition mechanism of tRNA (m5U54) methyltransferase (TrmFO) based on the biochemical and structural analysis

    • Author(s)
      R. Yamagami, K. Yamashita, H. Nishimasu, C. Iwashita, A. Hirata, O. Nureki, and H. Hori
    • Organizer
      第2回モデル生物丸ごと一匹学会
    • Place of Presentation
      兵庫
    • Related Report
      2012 Annual Research Report
  • [Presentation] RNAメチル化酵素の構造と反応機構の多様性:トポロジカル・ノット型RNAメチル化酵素発見からの8年間

    • Author(s)
      堀 弘幸
    • Organizer
      愛媛大学第184回応用化学科セミナー
    • Place of Presentation
      松山
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] RNAメチル化酵素の構造と反応機構の多様性

    • Author(s)
      堀 弘幸
    • Organizer
      岐阜大学生命工学科セミナー
    • Place of Presentation
      岐阜
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Negative control of Gm18, m5s2U54 and m1A58 modifications by pseudouridine55 modification in Thermus thermophilus tRNAs: the tRNA modification network in extreme thermophile

    • Author(s)
      C. Tomikawa, K. Ishida, T. Kunibayashi, A. Ochi, T. Kanai, A. Hirata, C. Iwashita, and H. Hori
    • Organizer
      24th tRNA workshop
    • Place of Presentation
      チリ
    • Related Report
      2012 Annual Research Report
  • [Presentation] Improvement of a protein purification method for nucleic acid-free in the case of recombinant tRNA (N2,N2-guanine)-dimethyltransferase (Trm1) from Aquifex aeolicus

    • Author(s)
      S. Nishiyama, A. Hirata, T. Awai, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] Research for substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI)

    • Author(s)
      H. Takuma, M. Minoji, N. Ushio, C. Tomikawa, A. Hirata, A. Ochi and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] Structural and functional analyses of archaeal 2’-5’ RNA ligase

    • Author(s)
      T. Nagano, A. Hirata, Y. Ishimaru, T. Kanai, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] Expression and purification of yeast tRNA (Cm32/Gm34) methyltransferase (Trm7)

    • Author(s)
      K. Yoshii, A. Hirata, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] 酵母由来のtRNA (m2G10) methyltransferase (Trm11-Trm112)の基質認識機構の解明

    • Author(s)
      西田 裕、岡田和樹、平田 章、堀 弘幸
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] tRNA modifications in thermoacidophilic archaeon

    • Author(s)
      T. Kawamura, C. Tomikawa, T. Ohira, Y. Inoue, A. Yamagishi, T. Suzuki, and H. Hori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Book] 「生命分子を統合するRNA-その秘められた役割と制御機構」1-3「tRNA修飾の構造と機能」実験医学増刊号2013

    • Author(s)
      堀弘幸
    • Publisher
      羊土社
    • Related Report
      2013 Final Research Report
  • [Book] 実験医学増刊号 生命分子を統合するRNA-その秘められた役割と制御機構1-3 tRNA修飾と機能2013

    • Author(s)
      堀 弘幸
    • Total Pages
      10
    • Publisher
      羊土社
    • Related Report
      2012 Annual Research Report
  • [Book] Degradation of hypo-modified tRNA in Thermus thermophilus, an extreme-thermophilic eubacteria, Advanced in Genetic Research, Vol. 6 (K. V. Urbano eds)2011

    • Author(s)
      C. Tomikawa and H. Hori
    • Publisher
      Nova Science Publisher
    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://www.ehime-u.ac.jp/~achem/bchem/

    • Related Report
      2013 Final Research Report
  • [Remarks] 応用生物化学研究室HP

    • URL

      http://www.ehime-u.ac.jp/~achem/bchem/

    • Related Report
      2013 Annual Research Report
  • [Remarks] 愛媛大学工学部応用化学科応用生物化学研究室ホームページ

    • URL

      http://www.ehime-u.ac.jp/~achem/bchem/

    • Related Report
      2012 Annual Research Report
  • [Remarks] 愛媛大学ホームページ研究活動トピックス

    • URL

      http://www.ehime-u.ac.jp/research/news/detail.html?new_rec=9781

    • Related Report
      2012 Annual Research Report
  • [Remarks] 当研究室のホームページは下記URLです

    • URL

      http://www.ehime-u.ac.jp/~achem/bchem/

    • Related Report
      2011 Annual Research Report
  • [Remarks] 随時、論文発表および学会発表の内容を広く全世界に公開しております

    • Related Report
      2011 Annual Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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