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Analysis on allergenic 13S globulin subunits of buckwheat

Research Project

Project/Area Number 23580020
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Crop science/Weed science
Research InstitutionKyoto University

Principal Investigator

TANAKA Tomoyuki  京都大学, (連合)農学研究科(研究院), 准教授 (50224473)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2011: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsソバ / 13Sグロブリン / 反復配列
Research Abstract

Buckwheat genomic DNA library, consisting of 142,005 clones, was screened to elucidate the diversity of 13S globulin genes. Twenty-six BAC clones were isolated and 17 genes of 13S globulin were identified, the sequences of which were deposited into DNA Data Bank of Japan. The unit length of nucleotides for most tandem repeat sequences, which are specifically inserted into alpha polypeptides of 13S globulin, was 45 bp while that of some repeats had extra three nucleotides like CGG or AGA, resulting in different secondary structure formation. On the other hand, preliminary experimental system was developed to analyze the effect of environmental factors on 13S globulin composition using autogamous tartary buckwheat.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (17 results)

All 2014 2013 2012 2011 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (12 results) Book (1 results) Remarks (1 results)

  • [Journal Article] "反復配列を持たない13Sグロブリン"を低減化したソバ個体の育成-0回反復サブユニットの遺伝子識別技術の開発-2014

    • Author(s)
      田中朋之・中川真梨子・佐野まどか・安井康夫
    • Journal Title

      作物研究

      Volume: 59(印刷中)

    • URL

      http://ci.nii.ac.jp/vol_issue/nels/AA12344964_ja.html

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diversification of 13S globulins, allergenic seed storage proteins, of common buckwheat2014

    • Author(s)
      Sano, M., Nakagawa, M., Oishi, A., Yasui, Y., Katsube-Tanaka, T
    • Journal Title

      Food Chemistry

      Volume: 155 Pages: 192-198

    • DOI

      10.1016/j.foodchem.2014.01.047

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Tandem repeat inserts in 13S globulin subunits, the major allergenic storage protein of common2012

    • Author(s)
      Khan, N., Takahashi, Y., Katsube-Tanaka, T
    • Journal Title

      Food Chemistry

      Volume: 133 Issue: 1 Pages: 29-37

    • DOI

      10.1016/j.foodchem.2011.12.056

    • Related Report
      2013 Final Research Report 2012 Research-status Report 2011 Research-status Report
    • Peer Reviewed
  • [Presentation] "反復配列を持たない13Sグロブリン遺伝子"を欠失したソバ個体の探索2013

    • Author(s)
      田中朋之・中川真梨子・佐野まどか・安井康夫
    • Organizer
      近畿作物・育種研究会第175回例会
    • Place of Presentation
      近畿大学,和歌山
    • Year and Date
      2013-07-13
    • Related Report
      2013 Final Research Report
  • [Presentation] Allergenic protein, 13S globulin, of common buckwheat diversified by the insertion of tandem repeat2013

    • Author(s)
      T. Katsube-Tanaka
    • Organizer
      The 2013 meeting of Korean Society of Crop Science
    • Place of Presentation
      Pyeongchang, Korea
    • Related Report
      2013 Final Research Report
  • [Presentation] ソバ13Sグロブリン遺伝子の多様性評価2013

    • Author(s)
      佐野まどか・中川真梨子・安井康夫・田中朋之
    • Organizer
      日本作物学会
    • Place of Presentation
      鹿児島大学,鹿児島
    • Related Report
      2013 Final Research Report
  • [Presentation] Diversity of 13S globulin genes identified in a genomic DNA library of common buckwheat2013

    • Author(s)
      T. Katsube-Tanaka, M. Sano, M. Nakagawa, Y. Yasui
    • Organizer
      The 12th International Symposium on Buckwheat
    • Place of Presentation
      Laško, Slovenia
    • Related Report
      2013 Final Research Report
  • [Presentation] Allergenic protein, 13S globulin, of common buckwheat diversified by the insertion of tandem repeat2013

    • Author(s)
      T. Katsube-Tanaka
    • Organizer
      2013 meeting of Korean Society of Crop Science
    • Place of Presentation
      Pyeongchang, Korea
    • Related Report
      2013 Annual Research Report
  • [Presentation] Diversity of 13S globulin genes identified in a genomic DNA library of common buckwheat2013

    • Author(s)
      T. Katsube-Tanaka, M. Sano, M. Nakagawa, Y. Yasui
    • Organizer
      12th International. Symposium on Buckwheat
    • Place of Presentation
      Lasko, Slovenia
    • Related Report
      2013 Annual Research Report
  • [Presentation] ソバ13S グロブリン遺伝子の多様性評価2013

    • Author(s)
      佐野まどか・中川真梨子・安井康夫・田中朋之
    • Organizer
      日本作物学会第236回講演会
    • Place of Presentation
      鹿児島大学,鹿児島
    • Related Report
      2013 Annual Research Report
  • [Presentation] “反復配列を持たない13Sグロブリン遺伝子”を欠失したソバ個体の探索2013

    • Author(s)
      田中朋之・中川真梨子・佐野まどか・安井康夫
    • Organizer
      近畿作物・育種研究会第175回例会
    • Place of Presentation
      近畿大学, 和歌山
    • Related Report
      2013 Annual Research Report
  • [Presentation] ゲノムライブラリーを用いたソバ13Sグロブリンにおける反復挿入配列の解析2012

    • Author(s)
      佐野まどか・中川真梨子・安井康夫・田中朋之
    • Organizer
      日本作物学会
    • Place of Presentation
      東北大学,仙台
    • Related Report
      2013 Final Research Report
  • [Presentation] ゲノムライブラリーを用いたソバ13Sグロブリンにおける反復挿入配列の解析2012

    • Author(s)
      佐野まどか・中川真梨子・安井康夫・田中朋之
    • Organizer
      日本作物学会
    • Place of Presentation
      東北大学
    • Related Report
      2012 Research-status Report
  • [Presentation] Analysis of the major seed storage protein, 13S globulin, in common buckwheat (Fagopyrum esculentum Moench)2011

    • Author(s)
      T. Katsube-Tanaka, N. Khan, Y. Takahashi, M. Nakagawa
    • Organizer
      The 7th Asian Crop Science Conference
    • Place of Presentation
      Bogor, Indonesia
    • Related Report
      2013 Final Research Report
  • [Presentation] Analysis of the major seed storage protein, 13S globulin, in common buckwheat (Fagopyrum esculentum Moench).2011

    • Author(s)
      T. Katsube-Tanaka, N. Khan, Y. Takahashi, M. Nakagawa.
    • Organizer
      ACSA2011 congress
    • Place of Presentation
      インドネシア国ボゴール
    • Related Report
      2011 Research-status Report
  • [Book] Methods in Molecular Boilogy, vol. 984, N. Volpi and F. Maccari (Eds.), Capillary Electrophoresis of Biomolecules, Capillary electrophoresis of seed strage proteins : the separation and identification of microheterogeneous rice glutelin subunits2013

    • Author(s)
      Katsube-Tanaka T
    • Publisher
      Humana Press (Springer)
    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://www.kais.kyoto-u.ac.jp/japanese/

    • Related Report
      2013 Final Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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