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Degradation mechanisms of sigma 32 by membrane targeting via SRP pathway

Research Project

Project/Area Number 23657128
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Cell biology
Research InstitutionKyoto University

Principal Investigator

MORI Hiroyuki  京都大学, ウイルス研究所, 准教授 (10243271)

Co-Investigator(Renkei-kenkyūsha) AKIYAMA Yoshinori  京都大学, ウイルス研究所, 教授 (10192460)
ITO Koreaki  京都産業大学, 総合生命科学部, 教授 (90027334)
Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2011: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords生体膜 / σ32 / SRP / Ffh / SecY / FtsH / 熱ショック応答 / 分子シャペロン / シグマ32
Research Abstract

In Escherichia coli.,a heat shock responsible transcription factor, sigma 32 is mainly and rapidly degraded by a membrane-bound ATP dependent protease, FtsH. However, precise molecular mechanisms of its degradation remain poorly understood. Using genetic analysis, Dr. Takashi Yura, one of our collaborators recently proposed that the SRP pathway involved in membrane protein biogenesis plays a significant role in the sigma 32 degradation. In this study, we carried out site-specific in vivo photo crosslinking analysis targeted to the sigma 32 and found that Ffh protein, a member of the SRP is in close proximity to the sigma 32.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (19 results)

All 2013 2012 2011 Other

All Journal Article (7 results) (of which Peer Reviewed: 7 results) Presentation (10 results) (of which Invited: 2 results) Remarks (2 results)

  • [Journal Article] 細菌のタンパク質分泌を促進する膜タンパク質SecDF の構造と機能2013

    • Author(s)
      森 博幸、塚崎智也
    • Journal Title

      化学と生物

      Volume: 51巻 Pages: 28-35

    • NAID

      10031146872

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] 細菌のタンパク質分泌を促進する膜タンパク質SecDFの構造と機能2013

    • Author(s)
      森 博幸、塚崎智也
    • Journal Title

      化学と生物

      Volume: 51 Pages: 28-35

    • NAID

      10031146872

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PDZ domains of RseP are not essential for sequential cleavage of RseA or stress-induced σ^E activation in vivo.2012

    • Author(s)
      Hizukuri, Y. & Akiyama, Y.
    • Journal Title

      Mol. Microbiol.

      Volume: 86 Pages: 1232-1245

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] tructure and function of SecDF, a protein export-enhancing membrane component2011

    • Author(s)
      Tsukazaki, T., et al
    • Journal Title

      Nature

      Volume: 475 Issue: 7350 Pages: 235-238

    • DOI

      10.1038/nature09980

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Post liberation cleavage of signal peptides is catalyzed by the S2P protease in bacteria2011

    • Author(s)
      Saito, A., et al
    • Journal Title

      Proc.Natl.Acad.Sci, USA

      Volume: 108 Issue: 33 Pages: 13740-13745

    • DOI

      10.1073/pnas.1108376108

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Nascentome analysis uncovers futile protein synthesis in Escherichia coli.2011

    • Author(s)
      Ito, K., Chadani, Y., Nakamori, K., Chiba, S., Akiyama, Y., &Abo, T.
    • Journal Title

      PLoS ONE

      Volume: 6

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Recruitment of a species-specific translational arrest module to monitor different cellular processes.2011

    • Author(s)
      Chiba, S., Kanamori, T., Ueda, T., Akiyama, Y., Pogliano, K. & Ito, K.
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: 108 Pages: 6073-6078

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Presentation] Structure and functionof SecDF, a membrane integrated protein translocation enhancing facor.2013

    • Author(s)
      森 博幸、塚崎智也、町田裕紀子、三登一八、濡木理、伊藤維昭、秋山芳展
    • Organizer
      第86回日本細菌学会ワークショップ「細胞構造研究の新展開」
    • Place of Presentation
      千葉
    • Year and Date
      2013-03-19
    • Related Report
      2012 Final Research Report
  • [Presentation] Structure and function of SecDF, a membrane integrated protein translocation enhancing factor2013

    • Author(s)
      森 博幸、塚崎智也、町田裕紀子、三登一八、濡木理、伊藤維昭、秋山芳展
    • Organizer
      第86回日本細菌学会ワークショップ
    • Place of Presentation
      千葉
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] ビブリオ菌のタンパク質分泌マシナリー:SecDFパラログの発現制御機構2012

    • Author(s)
      森 博幸、橋本成祐、小嶋誠司、本間道夫、秋山芳展
    • Organizer
      第85回日本生化学会大会シンポジウム「運動超分子マシナリーの機能メカニズム」
    • Place of Presentation
      福岡
    • Year and Date
      2012-12-15
    • Related Report
      2012 Final Research Report
  • [Presentation] ビブリオ菌のタンパク質分泌マシナリー:SecDFパラログの発現制御機構2012

    • Author(s)
      森 博幸、橋本成祐、小嶋誠司、本間道夫、秋山芳展
    • Organizer
      第85回日本生化学会大会シンポジウム
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 細菌の蛋白質膜透過装置の構造・機能・病原性との関わり2011

    • Author(s)
      森 博幸
    • Organizer
      第48回細菌学会中部支部会(特別講演)名古屋
    • Place of Presentation
      名古屋
    • Related Report
      2012 Final Research Report
  • [Presentation] 蛋白質膜透過を促進する膜内在性因子SecDFの構造と機能2011

    • Author(s)
      森 博幸、塚崎智也、越前友香、秋山芳展、濡木 理、伊藤維昭
    • Organizer
      第84回日本生化学会大会シンポジウム「生体膜エネルギー変換装置の超分子科学」
    • Place of Presentation
      京都
    • Related Report
      2012 Final Research Report
  • [Presentation] プロトン駆動力を用いたSecDF による蛋白質膜透過の昂進機構2011

    • Author(s)
      森 博幸、塚崎智也、越前友香、濡木理、伊藤維昭
    • Organizer
      第11回日本蛋白質科学会年会ワークショップ「細胞膜ダイナミクス:In vitro再構成系によるアプローチ」
    • Place of Presentation
      大阪
    • Related Report
      2012 Final Research Report
  • [Presentation] 細菌の蛋白質膜透過装置の構造・機能・病原性との関わり2011

    • Author(s)
      森 博幸
    • Organizer
      第48回細菌学会中部支部会(招待講演)(招待講演)
    • Place of Presentation
      名古屋
    • Related Report
      2011 Research-status Report
  • [Presentation] 蛋白質膜透過を促進する膜内在性因子SecDFの構造と機能2011

    • Author(s)
      森 博幸、塚崎智也ら(計6名)
    • Organizer
      第84回日本生化学会大会シンポジウム(招待講演)(招待講演)
    • Place of Presentation
      京都
    • Related Report
      2011 Research-status Report
  • [Presentation] プロトン駆動力を用いたSecDFによる蛋白質膜透過の昂進機構2011

    • Author(s)
      森 博幸、塚崎智也ら (計5名)
    • Organizer
      第11回日本蛋白質科学会年会ワークショップ(招待講演)(招待講演)
    • Place of Presentation
      大阪
    • Related Report
      2011 Research-status Report
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/akiyama/index.html

    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/about/y2011/mori20110512.html

    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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