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Molecular understanding of host-symbiont interaction in deep-sea hydrothermal fields.

Research Project

Project/Area Number 23687004
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Ecology/Environment
Research InstitutionKyoto University (2014)
Hokkaido University (2011-2013)

Principal Investigator

NAKAGAWA Satoshi  京都大学, (連合)農学研究科(研究院), 准教授 (70435832)

Project Period (FY) 2011-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥28,080,000 (Direct Cost: ¥21,600,000、Indirect Cost: ¥6,480,000)
Fiscal Year 2014: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Fiscal Year 2013: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2012: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2011: ¥14,430,000 (Direct Cost: ¥11,100,000、Indirect Cost: ¥3,330,000)
Keywords深海底熱水活動域 / 共生 / 生物間相互作用 / 糖鎖 / グライコミクス
Outline of Final Research Achievements

The main objective of this study is to reveal the molecular mechanisms underlying host-symbiont interactions in deep-sea hydrothermal vent environments. We especially have focused on sugar chains which might play important roles in the host-symbiont interactions. We have analyzed biological functions of unique sugar chains and glycan-binding proteins in various symbiotic systems (both episymbiosis and endosymbiosis).

Report

(5 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (36 results)

All 2014 2013 2012 2011

All Journal Article (8 results) (of which Peer Reviewed: 8 results,  Acknowledgement Compliant: 1 results) Presentation (27 results) (of which Invited: 3 results) Book (1 results)

  • [Journal Article] Sulfurovum aggregans sp. nov., a novel hydrogen-oxidizing, thiosulfate-reducing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent chimney at the Central Indian Ridge, and an emended description of the genus Sulfurovum.2014

    • Author(s)
      Mino S, Kudo H, Arai T, Sawabe T, Takai K, Nakagawa S.
    • Journal Title

      IJSEM

      Volume: 64 Issue: Pt_9 Pages: 3195-3201

    • DOI

      10.1099/ijs.0.065094-0

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Epsilonproteobacteria:特殊環境のスペシャリスト2014

    • Author(s)
      中川 聡
    • Journal Title

      Journal of Japanese Society for Extremophiles

      Volume: 12 Pages: 63-70

    • NAID

      40020753953

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont2014

    • Author(s)
      Satoshi Nakagawa
    • Journal Title

      The ISME Journal

      Volume: 8 Issue: 1 Pages: 40-51

    • DOI

      10.1038/ismej.2013.131

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High Connectivity of Animal Populations in Deep-Sea Hydrothermal Vent Fields in the Central Indian Ridge Relevant to Its Geological Setting2013

    • Author(s)
      Girish Beedessee
    • Journal Title

      PLoS One

      Volume: 8 Issue: 12 Pages: e81570-e81570

    • DOI

      10.1371/journal.pone.0081570

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Thiofractor thiocaminus gen. nov., sp. nov., a novel hydrogen-oxidizing, sulfur-reducing epsilonproteobacterium isolated from a deep-sea hydrothermal vent chimney in the Nikko Seamount field of the northern Mariana Arc.2012

    • Author(s)
      Makita, H.
    • Journal Title

      Arch.Microbiol.

      Volume: 194 Issue: 9 Pages: 785-794

    • DOI

      10.1007/s00203-012-0814-1

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Geochemical origin of hydrothermal fluid methane in sediment-associated fields and its relevance with the geographical distribution of whole hydrothermal circulation2012

    • Author(s)
      Kawagucci, S., Ueno, Y., Takai, K., Toki, T., Ito, M., Inoue, K., Makabe, A., Yoshida, N., Muramatsu, Y., Takahata, N., Sano, Y., Narita, T., Teranishi, G., Obata, H., Nakagawa, S., Nunoura, T., and Gamo, T
    • Journal Title

      Chem. Geol

      Volume: 339 Pages: 213-225

    • DOI

      10.1016/j.chemgeo.2012.05.003

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Microbial Communities Associated with Holothurians: Presence of Unique Bacteria in the Coelomic Fluid2012

    • Author(s)
      Enomoto, M
    • Journal Title

      Microbes and Environments

      Volume: 27 Issue: 3 Pages: 300-305

    • DOI

      10.1264/jsme2.ME12020

    • NAID

      10030869557

    • ISSN
      1342-6311, 1347-4405
    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Possible kilometer-scale hydrothermal circulation within the Iheya-North field, mid-Okinawa Trough, as inferred from heat flow data2011

    • Author(s)
      Masaki, Y
    • Journal Title

      JAMSTEC Report of Research and Development

      Volume: 12 Pages: 1-12

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] 浅海性無脊椎動物の体腔液に存在する微生物の群集構造解析2014

    • Author(s)
      砂田 高志
    • Organizer
      環境微生物系学会合同大会2014
    • Place of Presentation
      浜松アクトシティコングレスセンター(静岡県浜松市)
    • Year and Date
      2014-10-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] 深海底熱水活動域に生息する巻貝類とその共生細菌の群集遺伝学的解析2014

    • Author(s)
      村上 竣一
    • Organizer
      環境微生物系学会合同大会2014
    • Place of Presentation
      浜松アクトシティコングレスセンター(静岡県浜松市)
    • Year and Date
      2014-10-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] Global biogeography and population structure of deep-sea vent chemolithoautotrophs inferred from multilocus sequence analysis (MLSA).2014

    • Author(s)
      美野 さやか
    • Organizer
      ISME15
    • Place of Presentation
      Coex Convention Center (韓国ソウル)
    • Year and Date
      2014-08-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] 深海底熱水活動域に見られる化学合成共生系の多様性とその進化2014

    • Author(s)
      中川 聡
    • Organizer
      極限環境生物学会 第15回シンポジウム
    • Place of Presentation
      東京工業大学大岡山キャンパス(東京都目黒区)
    • Year and Date
      2014-06-07
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 深海底熱水活動域の固有甲殻類が有するレクチンの精製と性状解析2013

    • Author(s)
      藤吉奏
    • Organizer
      第32回日本糖質学会年会
    • Place of Presentation
      大阪国際交流センター(大阪府大阪市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Purification and characterization of serum lectin from a deep-sea hydrothermal vent invertebrate2013

    • Author(s)
      So Fujiyoshi
    • Organizer
      5th International Symposium on Chemosynthesis-Based Ecosystems
    • Place of Presentation
      Victoria Conference Center (Victoria, Canada)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 深海底熱水活動域に優占する微生物群の生態と特異生理機能2013

    • Author(s)
      中川聡
    • Organizer
      日本生物工学会北日本支部シンポジウム
    • Place of Presentation
      北海道大学水産学部(北海道函館市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 深海底熱水活動域に棲息する化学合成独立栄養微生物の多様性とその進化2013

    • Author(s)
      中川聡
    • Organizer
      極限環境生物学会2013年度(第14回)年会
    • Place of Presentation
      明治大学生田キャンパス(神奈川県川崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 深海底熱水活動域に発達する化学合成共生系の多様性とその進化2013

    • Author(s)
      中川聡
    • Organizer
      第29回日本微生物生態学会大会
    • Place of Presentation
      鹿児島大学郡元キャンパス(鹿児島県鹿児島市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 深海底熱水活動域に棲息する大型無脊椎動物の血清中レクチンの探索と性状解析2013

    • Author(s)
      藤吉 奏
    • Organizer
      ブルーアース2013
    • Place of Presentation
      東京海洋大学(東京)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 硫黄酸化細菌と共生している深海底生生物の長期飼育装置の開発2012

    • Author(s)
      小西正朗
    • Organizer
      日本農芸化学会2012年度大会
    • Place of Presentation
      京都女子大学(京都)
    • Year and Date
      2012-03-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] 伊平屋北海丘の海底熱水系の水銀濃度と同位体組成2012

    • Author(s)
      丸茂克美
    • Organizer
      ブルーアース12
    • Place of Presentation
      東京海洋大学(東京)
    • Year and Date
      2012-02-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] 飼育下で観察されたゴエモンコシオリエビの摂餌行動2012

    • Author(s)
      北嶋円
    • Organizer
      ブルーアース12
    • Place of Presentation
      東京海洋大学(東京)
    • Year and Date
      2012-02-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] 化学合成生態系の糖鎖生物学~異種生物間相互認識機構の解明にむけて~2012

    • Author(s)
      神藤彩加
    • Organizer
      ブルーアース12
    • Place of Presentation
      東京海洋大学(東京)
    • Year and Date
      2012-02-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] 伊平屋北海丘海底熱水系周辺における環境試料中水銀濃度分布2012

    • Author(s)
      冨安卓滋
    • Organizer
      ブルーアース12
    • Place of Presentation
      東京海洋大学(東京)
    • Year and Date
      2012-02-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] 深海底熱水活動域に棲息する化学合成独立栄養細菌が有する細胞表層糖脂質の構造比較2012

    • Author(s)
      神藤 彩加
    • Organizer
      第31回日本糖質学会年会
    • Place of Presentation
      鹿児島市民文化ホール(鹿児島県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 深海底熱水活動域に優占する化学合成独立栄養性共生細菌が持つ糖鎖抗原の構造解析2012

    • Author(s)
      新井 崇之
    • Organizer
      第31回日本糖質学会年会
    • Place of Presentation
      鹿児島市民文化ホール(鹿児島県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 深海底熱水活動域に固有の無脊椎動物が有する血清中レクチンの性状2012

    • Author(s)
      藤吉 奏
    • Organizer
      第31回日本糖質学会年会
    • Place of Presentation
      鹿児島市民文化ホール(鹿児島県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 深海底熱水活動域に棲息する化学合成独立栄養細菌の細胞表層に存在する糖脂質の構造比較2012

    • Author(s)
      神藤 彩加
    • Organizer
      第28回日本微生物生態学会大会
    • Place of Presentation
      豊橋技術科学大学(豊橋)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 深海性共生細菌とその自由生活型近縁種が有するリポ多糖の構造解析2012

    • Author(s)
      新井 崇之
    • Organizer
      第28回日本微生物生態学会大会
    • Place of Presentation
      豊橋技術科学大学(豊橋)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 深海底熱水活動域に棲息する無脊椎動物の血清中レクチンの性状解析2012

    • Author(s)
      藤吉 奏
    • Organizer
      第28回日本微生物生態学会大会
    • Place of Presentation
      豊橋技術科学大学(豊橋)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 糖鎖解析支援ソフト「GlyfinTMS^<TM>」の開発2011

    • Author(s)
      島村繁
    • Organizer
      第34回日本分子生物学会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] 深海底熱水活動域に優占する微生物群の分離とその性状解析2011

    • Author(s)
      中川聡
    • Organizer
      第27回 日本微生物生態学会大会
    • Place of Presentation
      京都大学(京都)(招待講演)
    • Year and Date
      2011-10-10
    • Related Report
      2011 Annual Research Report
  • [Presentation] Population genetics and ecophysiology of chemoautotrophic deep-sea vent Epsilonproteohacteria2011

    • Author(s)
      Satoshi Nakagawa
    • Organizer
      International Union of Microbiological Sciences 2011 Congress
    • Place of Presentation
      札幌コンベンションセンター(北海道)(招待講演)
    • Year and Date
      2011-09-06
    • Related Report
      2011 Annual Research Report
  • [Presentation] インド洋深海底熱水活動域に棲息する細胞内共生微生物のゲノム解析2011

    • Author(s)
      島村繁
    • Organizer
      ゲノム微生物学会ワークショップ
    • Place of Presentation
      東北大学(仙台)
    • Year and Date
      2011-08-20
    • Related Report
      2011 Annual Research Report
  • [Presentation] 深海底熱水活動域に棲息する共生微生物糖脂質とホスト生物血清中のN結合型糖鎖の解析2011

    • Author(s)
      渡邊珠希
    • Organizer
      第30回日本糖質学会年会
    • Place of Presentation
      ハイブ長岡(新潟県)
    • Year and Date
      2011-07-12
    • Related Report
      2011 Annual Research Report
  • [Presentation] 糖鎖解析支援ソフト「GlyfinTMS^<TM>」の紹介2011

    • Author(s)
      島村繁
    • Organizer
      第10回国際バイオEXPOバイオアカデミックフォーラム
    • Place of Presentation
      東京ビックサイト(東京都)
    • Year and Date
      2011-07-01
    • Related Report
      2011 Annual Research Report
  • [Book] 極限環境生物の産業展開2012

    • Author(s)
      今中忠行
    • Total Pages
      305
    • Publisher
      シーエムシー出版
    • Related Report
      2012 Annual Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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