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Single nucleotide-level genome engineering using transposon cassettes

Research Project

Project/Area Number 23710240
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied genomics
Research InstitutionKyoto University

Principal Investigator

WOLTJEN Knut  京都大学, 白眉センター, 准教授 (50589489)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2012: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Keywords遺伝子ターゲティング / ヌクレアーゼ / iPS細胞 / TALEN nuclease / transposon / cardiomyocyte / SNP / ion channel / Gene targeting / CRISPR/Cas9 nuclease / iPS Cell / long QT-syndrome / TALEヌクレアーゼ / トランスポゾン
Research Abstract

In this study, we aimed to combine TALEN (TAL-Effector Nuclease) technology and piggyBac transposon-based selection cassettes to establish novel gene-modification technology in human iPS cells. We succeeded in genetic modification using TALENs, disrupting the HPRT gene and introducing transgene cassettes into the AAVS1 locus in human iPS cells. In addition, we also succeeded in single base substitution within the HPRT gene using TALEN disruption and a single-stranded oligonucleotide repair template. Based on the gene modification technology that we have established in human iPS cells, we propose applications in gene correction of disease-specific iPS cells, or the production of disease models to understand pathogenesis and establish clinical treatments.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (17 results)

All 2014 2013 2012 2011 Other

All Journal Article (5 results) (of which Peer Reviewed: 4 results) Presentation (9 results) (of which Invited: 6 results) Book (2 results) Remarks (1 results)

  • [Journal Article] Nuclease-mediated genome editing : At the front-line of functional genomics technology2014

    • Author(s)
      Sakuma, T. and Woltjen, K.
    • Journal Title

      Development, growth & differentiation

      Volume: 56 Pages: 2-13

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Nuclease-mediated genome editing: At the front-line of functional genomics technology.2014

    • Author(s)
      Sakuma, T., and Woltjen, K.
    • Journal Title

      Development, growth & differentiation

      Volume: 56 Issue: 1 Pages: 2-13

    • DOI

      10.1111/dgd.12111

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Efficient TALEN construction and evaluation methods for human cell and animal applications2013

    • Author(s)
      Sakuma T., Hosoi S., Woltjen K., Suzuki K.I., Kashiwagi K, Wada H., Ochiai H., Miyamoto T., Kawai N., Sasakura Y., Matsuura S., Okada Y., Kawahara A., Hayashi S. and Yamamoto T.
    • Journal Title

      Genes to Cells

      Volume: 18(4) Pages: 315-326

    • Related Report
      2013 Final Research Report
  • [Journal Article] Efficient TALEN construction and evaluation methods for human cell and animal applications.2013

    • Author(s)
      Sakuma T, Hosoi S, Woltjen K, Suzuki KI, Kashiwagi K, Wada H, Ochiai H, Miyamoto T, Kawai N, Sasakura Y, Matsuura S, Okada Y, Kawahara A, Hayashi S, Yamamoto T.
    • Journal Title

      Genes to Cells

      Volume: (In press) Issue: 4 Pages: 315-326

    • DOI

      10.1111/gtc.12037

    • Related Report
      2013 Annual Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Highly efficient site-specific transgenesis in cancer cell lines2012

    • Author(s)
      Michael, I.P., Monetti, C., Chiu, A.C., Zhang, P., Baba, T., Nishino, K., Agha-Mohammadi, S., Woltjen, K., Sung, H.K. and Nagy, A.
    • Journal Title

      Molecular Cancer

      Volume: 11(1) Pages: 89-100

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Presentation] Transposed and targeted gene expression systems for guiding somatic cell reprogramming and differentiation2013

    • Author(s)
      Woltjen, K.
    • Organizer
      Conference on Transposition and Genome Engineering
    • Place of Presentation
      Budapest, Hungary
    • Year and Date
      2013-09-18
    • Related Report
      2013 Final Research Report
  • [Presentation] Transposed and targeted gene expression systems for guiding somatic cell reprogramming and differentiation2013

    • Author(s)
      Woltjen, K.
    • Organizer
      Japanese Society for Developmental Biology
    • Place of Presentation
      松江、日本
    • Year and Date
      2013-05-31
    • Related Report
      2013 Final Research Report
  • [Presentation] Transposon Systems Guiding Somatic Cell Reprogramming and Differentiation2013

    • Author(s)
      Knut Woltjen
    • Organizer
      iCeMS-Stem Cells Australia Joint Symposium
    • Place of Presentation
      Melbourne
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Developing TALEN-mediated genome engineering strategies for human iPS cells2012

    • Author(s)
      Woltjen, K.
    • Organizer
      2回のゲノム編集研究会
    • Place of Presentation
      岡崎、日本
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Genome engineering strategies forhuman iPS cells2012

    • Author(s)
      Woltjen, K.
    • Organizer
      分子生物学学会
    • Place of Presentation
      福岡、日本
    • Related Report
      2013 Final Research Report
  • [Presentation] Developing TALEN-Mediated Genome Engineering Strategies for Human iPS Cells2012

    • Author(s)
      Knut Woltjen
    • Organizer
      2回のゲノム編集研究会
    • Place of Presentation
      岡崎
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Genome Engineering Strategies for Human iPS Cells2012

    • Author(s)
      Knut Woltjen
    • Organizer
      分子生物学会
    • Place of Presentation
      福岡
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] Transposed and Targeted Gene Expression Systems for Guiding Somatic Cell Reprogramming and Differentiation

    • Author(s)
      Woltjen, K.
    • Organizer
      Conference on Transposition and Genome Engineering
    • Place of Presentation
      Budapest, Hungary
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Transposed and Targeted Gene Expression Systems for Guiding Somatic Cell Reprogramming and Differentiation

    • Author(s)
      Woltjen, K.
    • Organizer
      Japanese Society for Developmental Biology
    • Place of Presentation
      Matsue, Japan
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Book] TALENを用いたヒト iPS細胞におけるゲノム編集; Vol.32 (5)2013

    • Author(s)
      李紅梅, Knut Woltjen,高橋和利,山中伸弥,堀田秋津
    • Publisher
      細胞工学
    • Related Report
      2013 Final Research Report
  • [Book] Transposon-Based Production of Genetically Unmodified Induced Pluripotent Stem Cells From Human Embryonic Fibroblasts2011

    • Author(s)
      Woltjen, K., Hamalainen, R., Kibschull, M., Mileikovsky, M., Nagy, A.
    • Publisher
      Methods in Molecular Biology
    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://www.cira.kyoto-u.ac.jp/woltjen/

    • Related Report
      2013 Final Research Report

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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