• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Physiological and mathematical modeling of periodic synchronized neural firing phenomenon by data driven approach

Research Project

Project/Area Number 24300108
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Statistical science
Research InstitutionThe Institute of Statistical Mathematics

Principal Investigator

ISHIGURO Makio  統計数理研究所, 大学共同利用機関等の部局等, 名誉教授 (10000217)

Co-Investigator(Kenkyū-buntansha) MIWAKEICHI Fumikazu  統計数理研究所, モデリング研究系, 准教授 (30360647)
OKU Yoshitaka  兵庫医科大学, 医学部, 教授 (20252512)
OKADA Yasumasa  独立行政法人国立病院機構村山医療センター(臨床研究センター), 内科, 医長 (80160688)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥18,330,000 (Direct Cost: ¥14,100,000、Indirect Cost: ¥4,230,000)
Fiscal Year 2014: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2013: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2012: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Keywords時系列解析 / 神経情報学 / 生体イメージングデータ解析 / 階層神経モデリング
Outline of Final Research Achievements

We have developed practical preprocessing methods to correct incompleteness of the image such as non-uniform illumination, motion artifact and so on. Further, we suggested an efficient strategy to discriminate neurons and astrocytes in the respiratory-related region in the brainstem using statistical maps such as variances, time-lagged cross correlation coefficients and so on. From the physiological point of view, we obtained findings suggesting the existence of slowly oscillating astrocytic network weakly coupled with neuronal network and stochastic activation among inspiratory neurons within the respiratory rhythm-generating kernel. These results will provide us new paradigms for further mathematical studies of neuronal network exhibiting synchronous bursting activity.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (38 results)

All 2015 2014 2013 2012 Other

All Journal Article (15 results) (of which Peer Reviewed: 15 results,  Open Access: 1 results,  Acknowledgement Compliant: 3 results) Presentation (23 results) (of which Invited: 4 results)

  • [Journal Article] Respiratory calcium fluctuations in low-frequency oscillating astrocytes in the pre-Bötzinger2015

    • Author(s)
      Oku Y, Fresemann J, Miwakeichi F, Hülsmann S
    • Journal Title

      Respiratory Physiology & Neurobiology

      Volume: 00 Pages: 00-00

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Pixel timing correction in time-lapsed calcium imaging using point scanning microscopy2014

    • Author(s)
      Boiroux D, Oke Y, Miwakeichi F, Oku Y
    • Journal Title

      Journal Neuroscience Methods

      Volume: 30, 237 Pages: 60-68

    • DOI

      10.1016/j.jneumeth.2014.08.008

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Anatomical and functional pathways of rhythmogenic inspiratory premotor information flow originating in the pre-Bötzinger complex in the rat medulla2014

    • Author(s)
      Koshiya N, Oku Y, Yokota S, Oyamada Y, Yasui Y, Okada Y
    • Journal Title

      Neuroscience

      Volume: 268 Pages: 194-211

    • DOI

      10.1016/j.neuroscience.2014.03.002

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Anatomical and functional pathways of rhythmogenic inspiratory premotor information flow originating in the pre-Botzinger complex in the rat medulla2014

    • Author(s)
      Koshiya N, Oku Y, Yokota S, Oyamada Y, Yasui Y, Okada Y.
    • Journal Title

      Neuroscience

      Volume: 00 Pages: 0-0

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Standardization of Size, Shape and Internal Structure of Spinal Cord Images: Comparison of Three Transformation Methods2013

    • Author(s)
      Fujiki, Y., Yokoota, S., Okada, Y., Oku, Y., Tamura, Y., Ishiguro, M., Miwakeichi, F.
    • Journal Title

      PLOS ONE

      Volume: 8(11) Issue: 11 Pages: e76415-e76415

    • DOI

      10.1371/journal.pone.0076415

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 生体イメージングデータ解析のための時空間フィルタリング方法2013

    • Author(s)
      三分一 史和
    • Journal Title

      認知神経科学

      Volume: 15-1 Pages: 25-32

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 各種病態における呼吸困難感の出現・知覚機序とその対策2013

    • Author(s)
      岡田泰昌、梅田啓
    • Journal Title

      呼吸 と循環

      Volume: 61(5) Pages: 444-454

    • NAID

      40019684654

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] COPDの呼吸困難感に対する対策2013

    • Author(s)
      岡田泰昌、武田湖太郎、梅田啓
    • Journal Title

      呼吸器内科

      Volume: 23(6) Pages: 610-617

    • NAID

      40019753724

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 各種病態における呼吸困難感の出現・知覚機序とその対策2013

    • Author(s)
      岡田泰昌、梅田啓
    • Journal Title

      呼吸と循環

      Volume: 61(5) Pages: 444-454

    • NAID

      40019684654

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] COPDの呼吸困難感に対する対策2013

    • Author(s)
      岡田泰昌、武田湖太郎、梅田啓
    • Journal Title

      呼吸器内科

      Volume: (in press)

    • NAID

      40019753724

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 単一試行生体イメージングデータ解析のためのAR型モデルに基づく時空間フィルタリング法2012

    • Author(s)
      三分一史和、越久仁敬、岡田泰昌、川合成治、田村義保、石黒真木夫
    • Journal Title

      統計数理

      Volume: 60(1) Pages: 149-157

    • NAID

      120006020413

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Preinspiratory calcium rise in putative pre-Botzinger complex astrocytes2012

    • Author(s)
      Y. Okada, T. Sasaki. Y. Oku, N. Takahashi, M. Seki, S. Ujita, K. Tanaka, N. Matsuki, Y. Ikegaya
    • Journal Title

      Journal of Physiology

      Volume: 590 Issue: 19 Pages: 4933-4944

    • DOI

      10.1113/jphysiol.2012.231464

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Calcium/calmodulin-dependent protein kinases in the carotid body : an immunohistochemical study2012

    • Author(s)
      Pokorski M, Sakagami H, Okada Y
    • Journal Title

      Springerplus

      Volume: 1 Issue: 1 Pages: 16-16

    • DOI

      10.1186/2193-1801-1-16

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Time-course of ventilation, arterial and pulmonary CO2 tension during CO2 increase in humans2012

    • Author(s)
      Satoh T, Okada Y, Hara Y, Sakamaki F, Kyotani S, Tomita T, Nagaya N, Nakanishi N.
    • Journal Title

      Advances in Experimental Medicine and Biology

      Volume: 758 Pages: 63-70

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 正確さの比較 : Bland-Altman解析による呼吸器内科領域代替検査法の検証,2012

    • Author(s)
      梅田啓,岡田泰昌
    • Journal Title

      呼吸と循環

      Volume: 60(8) Pages: 840-848

    • NAID

      40019390146

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] Astrocytes mediate short-term plasticity of breathing2015

    • Author(s)
      Okada Y, Takeda K, Someya H, Oku Y, Miwakeichi F, Ishiguro M, Tamura Y, Pokorski M
    • Organizer
      Experimental Biology 2015
    • Place of Presentation
      Boston
    • Year and Date
      2015-03-28 – 2015-04-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] Connectomics of the inspiratory center: Anatomical tract and propagation dynamics from the preBötzinger complex2014

    • Author(s)
      Okada Y, Oku Y, Yokota S, Oyamada Y, YASUI, Koshiya N
    • Organizer
      Society for Neuroscience Meeting 2014
    • Place of Presentation
      Washington DC
    • Year and Date
      2014-11-15 – 2014-11-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] From chaotic recruitment of the pre-Bötzinger complex (pre-BötC) to functional connectomics of inter-pre-BötC tract and pan-network premotor pathways2014

    • Author(s)
      N Koshiya, Y Oku, Y Okada, JC Smith
    • Organizer
      The XIIIth Oxford Breathing Meeting, Respiratory and Cardiovascular
    • Place of Presentation
      Sydney
    • Year and Date
      2014-10-26 – 2014-10-31
    • Related Report
      2014 Annual Research Report
  • [Presentation] 統計値マップによるニューロン、アストロサイトの識別2014

    • Author(s)
      三分一 史和, 尾家 慶彦
    • Organizer
      統計数理研究所 共同研究集会「ダイナミカルバイオインフォマテイックスの展開III」
    • Place of Presentation
      統計数理研究所
    • Year and Date
      2014-09-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] 光学的イメージング法とニューロン、アストロサイトの識別2014

    • Author(s)
      三分一 史和, 尾家 慶彦
    • Organizer
      電子情報通信学会医用画像研究会”医用画像解析における統計数理的手法”
    • Place of Presentation
      統計数理研究所
    • Year and Date
      2014-09-02
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Post-hypoxic potentiation of breathing is induced by sustained activation of astrocytes2014

    • Author(s)
      Okada Y, Fukusi I, Takeda K, Oyamada Y, Oku Y, Miwakeichi F, Someya H, Ishiguro M, Tamura Y, Pokorski M
    • Organizer
      The 54th Annual Meeting of the Japanese Respiratory Society
    • Place of Presentation
      Osaka
    • Year and Date
      2014-04-25 – 2014-04-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Severe hypoxia-induced ventilatory depression analyzed by spectrography of EEG and respiratory output2014

    • Author(s)
      Fukushi I, Kuniya M, Maeno Y, Muraoka Y, Takeda K, Okada Y.
    • Organizer
      The 91st Annual Meeting of the Physiological Society of Japan
    • Place of Presentation
      Kagoshima, Japan
    • Related Report
      2013 Annual Research Report
  • [Presentation] Sensory information processing by astrocytes and neurons in the spinal corddorsal horn via P2X receptors : voltage-imaging, patch clamp and anatomical analyses2013

    • Author(s)
      Takeda K, Pokorski M, Oyamada Y, Okada Y
    • Organizer
      The 90 th Annual Meeting of the Physiological Society of Japan
    • Place of Presentation
      タワーホール船堀(東京)
    • Year and Date
      2013-03-28
    • Related Report
      2012 Annual Research Report
  • [Presentation] In silico reconstruction of the respiratory neuronal network. Symposium : Mechanism of respiratory rhythm generation : From the forefront of research2013

    • Author(s)
      Oku Y, Lai A
    • Organizer
      The 90th Annual Meeting of the Physiological Society of Japan
    • Place of Presentation
      タワーホール船堀(東京)
    • Year and Date
      2013-03-27
    • Related Report
      2012 Annual Research Report
  • [Presentation] Respiratory rhythm is driven by astrocytes in the preBotz inger complex2013

    • Author(s)
      Okada Y
    • Organizer
      The 90th Annual Meeting of the Physiological Society of Japan
    • Place of Presentation
      タワーホール船堀(東京)
    • Year and Date
      2013-03-27
    • Related Report
      2012 Annual Research Report
  • [Presentation] DMSO: A potential detriment for nociception and respiration2013

    • Author(s)
      Takeda K, Pokorski M, Oyamada Y, Okada Y.
    • Organizer
      The 36th Annual Meeting of the Japan Neuroscience Society (Neuro2013)
    • Place of Presentation
      Kyoto, Japan
    • Related Report
      2013 Annual Research Report
  • [Presentation] Effects of TRPA1 channel antagonism on hypoxic and hypercapnic ventilatory responses2013

    • Author(s)
      Takeda K, Pokorski M, Sato Y, Oyamada Y, Okada Y.
    • Organizer
      The 43rd annual meeting of the Society for Neuroscience (Neuroscience2013)
    • Place of Presentation
      San Diego, USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] 生体イメージングデータ解析のための時空間フィルタリング法2012

    • Author(s)
      三分一史和, 越久仁敬, 岡田泰昌, 川合成治, 田村義保, 石黒真木夫
    • Organizer
      第17回認知神経科学会学術集会
    • Place of Presentation
      東京大学武田記念ホール(東京)(招待講演)
    • Year and Date
      2012-09-30
    • Related Report
      2012 Annual Research Report
  • [Presentation] Spatial averaging of dynamic voltage imaging data by standardizing the shape, size and internal structure of multiple samples2012

    • Author(s)
      Fuj iki Y, Okada Y, Oku Y, Yokota S, Tamura Y, Ishiguro M, Miwakeichi F.
    • Organizer
      The 35th Annual Meeting of the Japan Neuroscience Society (Neuroscience 2012)
    • Place of Presentation
      名古屋国際会議場(名古屋)
    • Year and Date
      2012-09-20
    • Related Report
      2012 Annual Research Report
  • [Presentation] Spatio-temporal analysis for brain imaging data2012

    • Author(s)
      Miwakeichi F
    • Organizer
      1st Meeing of The Respiratory Physiome Project
    • Place of Presentation
      Gottingen University (Gottingen, Germany)(招待講演)
    • Year and Date
      2012-08-27
    • Related Report
      2012 Annual Research Report
  • [Presentation] Sensory information processing by astrocytes and neurons in the spinal corddorsal horn via P2X receptors : voltage-imaging, patch clamp and anatomical analyses2012

    • Author(s)
      Okada Y, Yokota S, Oku Y.
    • Organizer
      FENS Forum 2012
    • Place of Presentation
      International Conventions Center (Barcelona, Spain)
    • Year and Date
      2012-07-17
    • Related Report
      2012 Annual Research Report
  • [Presentation] An innovation approach to detect spatio-temporal neural activation patterns in brain imaging data2012

    • Author(s)
      Miwakeichi F, Oku Y, Okada Y, Kawai S, Tamura Y, Ishiguro M
    • Organizer
      The 2nd Institute of Mathematical Statistics Asia Pacific Rim Meeting
    • Place of Presentation
      筑波国際会議場(茨城)
    • Year and Date
      2012-07-02
    • Related Report
      2012 Annual Research Report
  • [Presentation] Sensory information processing by astrocytes and neurons in the spinal corddorsal horn via P2X receptors : voltage-imaging, patch clamp and anatomical analyses2012

    • Author(s)
      Okada Y, Aoyama R, Yokota S, Yasui Y, Fukuda K, Shinozaki Y, Yoshida H, Nakamura M, Chiba K, Yasui Y, Kato F, Toyama Y.
    • Organizer
      Purine 2012 : Adenine Nucleosides and Nucleotides in Biomedicine
    • Place of Presentation
      九州大学医学部百年講堂(福岡)
    • Year and Date
      2012-06-01
    • Related Report
      2012 Annual Research Report
  • [Presentation] Evolution of the analysis of brain signal

    • Author(s)
      Miwakeichi, F.
    • Organizer
      Research Center for Applied Perceptual Science Kickoff Symposium, Between Perception and Language
    • Place of Presentation
      Fukuoka, Japan
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Extraction of Neural Activation from Biological Spatio-temporal Imaging Data using Autoregressive Model-based Filtering Technique

    • Author(s)
      Miwakeichi, F.
    • Organizer
      GLOBAL HEALTH 2013, The Second International Conference on Global Health Challenges
    • Place of Presentation
      Lisbon Portugal
    • Related Report
      2013 Annual Research Report
  • [Presentation] Detection and discrimination of neuron and astrocyte using Ca imaging data

    • Author(s)
      Miwakeichi, F.
    • Organizer
      2nd Meeting of The Respiratory Physiome Conference Consortium
    • Place of Presentation
      Hyogo, Japan
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Discrimination of neuron and astrocyte using statistical imaging methods

    • Author(s)
      Miwakeichi, F.
    • Organizer
      3nd Meeting of The Respiratory Physiome Conference Consortium
    • Place of Presentation
      Gottingen, Germany
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Post-hypoxic potentiation of breathing is mediated by astrocytes

    • Author(s)
      Okada Y, Takeda K, Oyamada Y, Oku Y, Miwakeichi F, Someya. H, Ishiguro M, Tamura Y, Mieczyslaw. P.
    • Organizer
      XI European Meeting on Glial Cells in Health and Disease
    • Place of Presentation
      Berlin, Germany
    • Related Report
      2013 Annual Research Report

URL: 

Published: 2012-04-24   Modified: 2024-01-24  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi