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Generation of the cell factories for bio-based organic acid production through improvement of filamentous fungi by modification of transport system

Research Project

Project/Area Number 25450114
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionWaseda University

Principal Investigator

Kirimura Kohtaro  早稲田大学, 理工学術院, 教授 (90195412)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2015: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2014: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2013: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Keywords応用微生物 / セルファクトリ / クエン酸輸送体 / 酵素 / 代謝工学 / 有機酸 / クエン酸 / trans-アコニット酸 / aconitate isomerase / Aspergillus niger / cell factory / citrate transporter / fermentation / malate citrate shuttle / metabolic engineering / citric acid production / citrate transport
Outline of Final Research Achievements

For generation of the cell factories for bio-based organic acid production, functional analyses of genes encoding putative mitochondrial citrate transport proteins in citric acid-producing Aspergillus niger were performed. Screening of microorganisms capable of assimilating citric acid as a sole carbon source was also performed, and a novel aconitate isomerase was obtained. trans-Aconitic acid was produced successfully from citric acid by utilization of recombinant E. coli cells heterologously expressing the novel aconitate isomerase gene as biocatalysts for the whole-cell reaction. There is some possibility that heterologous expression of genes encoding novel and specific enzymes related to citrate metabolism in citric acid-producing A. niger as a host and improvement of citrate transport system by genetic engineering will open the way for generation of the cell factories for bio-based organic acid production.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (34 results)

All 2016 2015 2014 2013

All Journal Article (10 results) (of which Peer Reviewed: 9 results,  Acknowledgement Compliant: 4 results) Presentation (23 results) (of which Int'l Joint Research: 2 results) Book (1 results)

  • [Journal Article] Phenotypes of Gene Disruptants in Relation to a Putative Mitochondrial Malate-Citrate Shuttle Protein in Citric Acid-Producing Aspergillus niger2016

    • Author(s)
      Kohtaro Kirimura, Keiichi Kobayashi, Yuka Ueda, Takasumi Hattori
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 80 Issue: 9 Pages: 1737-1746

    • DOI

      10.1080/09168451.2016.1164583

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Heterologous Gene Expression and Functional Analysis of a Type III Polyketide Synthase from Aspergillus niger NRRL 3282016

    • Author(s)
      Kohtaro Kirimura, Shotaro Watanabe, Keiichi Kobayashi
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 473 Issue: 4 Pages: 1106-1110

    • DOI

      10.1016/j.bbrc.2016.04.023

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Bioproduction of trans-Aconitic Acid from Citric Acid by Whole-Cell Reaction of Escherichia coli Heterologously Expressing the Aconitate Isomerase Gene from Pseudomonas sp. WU-07012016

    • Author(s)
      Keiichi Kobayashi, Junya Maruebi, Kohtaro Kirimura
    • Journal Title

      Chemistry Select

      Volume: in press

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Enzymatic Characterization and Gene Identification of Aconitate Isomerase, an Enzyme Involved in Assimilation of trans-Aconitic Acid, from Pseudomonas sp. WU-07012015

    • Author(s)
      Kahori Yuhara, Hiromi Yonehara, Takasumi Hattori, Keiichi Kobayashi, Kohtaro Kirimura
    • Journal Title

      FEBS Journal

      Volume: 282 Issue: 22 Pages: 4257-4267

    • DOI

      10.1111/febs.13494

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Isolation and characterization of bacterial strains with the ability to utilize high concentrations of levulinic acid, a platform chemical from inedible biomass2015

    • Author(s)
      Hiroshi Habe, Shun Sato, Tomotake Morita, Tokuma Fukuoka, Kohtaro Kirimura, Dai Kitamoto
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 79 Issue: 9 Pages: 1552-1555

    • DOI

      10.1080/09168451.2015.1031076

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Overexpression of the NADP+-Specific Isocitrate Dehydrogenase Gene (icdA) in Citric Acid-Producing Aspergillus niger WU-2223L2014

    • Author(s)
      Keiichi Kobayashi, Takasumi Hattori, Rie Hayashi, and Kohtaro Kirimura
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 78

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Oxalic Acid Production by Citric Acid-Producing Aspergillus niger Overexpressing the Oxaloacetate Hydrolase Gene oahA2014

    • Author(s)
      Keiichi Kobayashi, Takasumi Hattori, Yuki Honda, Kohtaro Kirimura
    • Journal Title

      Journal of Industrial Microbiology and Biotechnology

      Volume: 41 Issue: 5 Pages: 749-756

    • DOI

      10.1007/s10295-014-1419-2

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Gene Identification and Functional Analysis of Methylcitrate Synthase in Citric Acid-Producing <i>Aspergillus niger</i> WU-2223L2013

    • Author(s)
      Keiichi Kobayashi, Takasumi Hattori, Yuki Honda, Kohtaro Kirimura
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 77 Issue: 7 Pages: 1492-1498

    • DOI

      10.1271/bbb.130139

    • NAID

      10031190458

    • ISSN
      0916-8451, 1347-6947
    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] l-Menthyl α-Maltoside as a Novel Low-Molecular-Weight Gelator2013

    • Author(s)
      Kohei Ide, Toshiyuki Sato, Jun Aoi, Hiroyuki Do, Keiichi Kobayashi, Yuki Honda, Kohtaro Kirimura
    • Journal Title

      Chemistry Letters

      Volume: 42 Issue: 6 Pages: 657-659

    • DOI

      10.1246/cl.130122

    • NAID

      10031176041

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Generation of Circularly Permuted Fluorescent-Protein-Based Indicators for in Vitro and in Vivo Detection of Citrate2013

    • Author(s)
      Yuki Honda, Kohtaro Kirimura
    • Journal Title

      PLoS ONE

      Volume: 8 Issue: 5 Pages: e64597-e64597

    • DOI

      10.1371/journal.pone.0064597

    • Related Report
      2013 Research-status Report
  • [Presentation] 非海洋性細菌由来ネオアガロビオース加水分解酵素の諸性質検討と遺伝子解析2016

    • Author(s)
      樫村佳奈, 渡辺輝彦, 小林慶一, 桐村光太郎
    • Organizer
      日本農芸化学会2016年度大会
    • Place of Presentation
      札幌
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] クエン酸生産糸状菌Aspergillus nigerにおけるミトコンドリア膜局在型クエン酸輸送体遺伝子破壊株の作製2016

    • Author(s)
      小林慶一, 上田由佳, 桐村光太郎
    • Organizer
      日本農芸化学会2016年度大会
    • Place of Presentation
      札幌
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] アコニット酸イソメラーゼ遺伝子を異種発現させた組換え大腸菌の細胞反応によるクエン酸からのtrans-アコニット酸生産2016

    • Author(s)
      丸海老純也, 油原かほり, 小林慶一, 桐村光太郎
    • Organizer
      日本農芸化学会2016年度大会
    • Place of Presentation
      札幌
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] trans-Aconitic Acid from Citric Acid by Whole-Cell Reactions of Escherichia coli Heterologously Expressing Aconitate Isomerase Gene (ais)2015

    • Author(s)
      Keiichi Kobayashi, Kahori Yuhara, Hiromi Yonehara, Junya Maruebi, Takasumi Hattori, Kohtaro Kirimura
    • Organizer
      The International Chemical Congress of Pacific Basin Societies (PACIFICHEM) 2015
    • Place of Presentation
      Honolulu (Hawaii, USA)
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Pseudomonas sp. WU-0701由来アコニット酸イソメラーゼの諸性質検討と遺伝子同定2015

    • Author(s)
      丸海老純也, 油原かほり, 小林慶一, 桐村光太郎
    • Organizer
      第67回日本生物工学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] 好アルカリ性細菌Cellvibrio sp. WU-0601由来ネオアガロビオース加水分解酵素の酵素的諸性質の決定と遺伝子の同定2015

    • Author(s)
      渡辺輝彦, 樫村佳奈, 小林慶一, 桐村光太郎
    • Organizer
      第67回日本生物工学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] 遺伝子改変によるメチルサリチル酸への活性を示す可逆的サリチル酸脱炭酸酵素の作製2015

    • Author(s)
      熊倉匠, 秋山智寛, 小林慶一, 桐村光太郎
    • Organizer
      第67回日本生物工学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] クエン酸生産糸状菌Aspergillus nigerにおけるクエン酸輸送体遺伝子の機能解析2015

    • Author(s)
      小林慶一, 上田由佳, 桐村光太郎
    • Organizer
      第67回日本生物工学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] 可逆的サリチル酸脱炭酸酵素の改変と酵素的Kolbe-Schmitt反応によるメチルサリチル酸生産2015

    • Author(s)
      熊倉匠, 桐村光太郎
    • Organizer
      第5回CSJ化学フェスタ2015
    • Place of Presentation
      東京
    • Year and Date
      2015-10-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Efficient Production of Oxalic Acid by Aspergilus niger Strains Overexpressing Genes Encoding Oxaloacetate Hydrolase and Alternative Oxidase2015

    • Author(s)
      Keiichi Kobayashi, Shotaro Watanabe, Kohtaro Kirimura
    • Organizer
      The Biotrans 2015
    • Place of Presentation
      Wien (Austria)
    • Year and Date
      2015-07-26
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] セルロース由来基幹化学品レブリン酸の微生物変換2015

    • Author(s)
      羽部浩, 佐藤俊, 森田友岳, 福岡徳馬, 小林慶一, 桐村光太郎, 北本大
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] 高濃度レブリン酸分解菌の単離と解析2015

    • Author(s)
      羽部浩, 佐藤俊, 森田友岳, 福岡徳馬, 小林慶一, 桐村光太郎, 北本大
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] クエン酸生産糸状菌Aspergillus niger におけるクエン酸輸送体遺伝子破壊株の表現型2014

    • Author(s)
      上田由佳, 小林慶一, 桐村光太郎
    • Organizer
      第66回日本生物工学会大会
    • Place of Presentation
      札幌
    • Year and Date
      2014-09-09 – 2014-09-11
    • Related Report
      2014 Research-status Report
  • [Presentation] オキサロ酢酸加水分解酵素遺伝子の高発現による糸状菌Aspergillus nigerを利用したシュウ酸の高収率生産2014

    • Author(s)
      小林慶一, 渡邉昭太郎, 桐村光太郎
    • Organizer
      第66回日本生物工学会大会
    • Place of Presentation
      札幌
    • Year and Date
      2014-09-09 – 2014-09-11
    • Related Report
      2014 Research-status Report
  • [Presentation] 酵母Trichosporon moniliiformeの細胞反応を利用した安息香酸からのp-ヒドロキシ安息香酸の酵素的生産2014

    • Author(s)
      吉野周平, 安藤拓也, 小林慶一, 桐村光太郎
    • Organizer
      第66回日本生物工学会大会
    • Place of Presentation
      札幌
    • Year and Date
      2014-09-09 – 2014-09-11
    • Related Report
      2014 Research-status Report
  • [Presentation] Generation of Oxalic Acid Hyperproducers by Overexpressing the Oxaloacetate Hydrolase Gene in Aspergillus niger2014

    • Author(s)
      K. Kobayashi, Shotaro Watanabe, Kohtaro Kirimura
    • Organizer
      16th European Congress on Biotechnology
    • Place of Presentation
      Edinburgh
    • Year and Date
      2014-07-13 – 2014-07-16
    • Related Report
      2014 Research-status Report
  • [Presentation] クエン酸生産糸状菌Aspergillus niger におけるシアン非感受性呼吸系酵素遺伝子aox1の高発現によるクエン酸生産量の向上2014

    • Author(s)
      田中 珠,服部 貴澄,小林 慶一,桐村 光太郎
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学 生田キャンパス(東京都)
    • Related Report
      2013 Research-status Report
  • [Presentation] アコニット酸イソメラーゼ遺伝子を高発現させた組換え大腸菌によるクエン酸からのtrans-アコニット酸生産2014

    • Author(s)
      油原 かほり,池上 由宇真,小林 慶一,桐村 光太郎
    • Organizer
      日本化学会第94春季年回
    • Place of Presentation
      名古屋大学 東山キャンパス(愛知県)
    • Related Report
      2013 Research-status Report
  • [Presentation] 酵母Trichosporon moniliiformeの細胞を生体触媒として利用した安息香酸からのp-ヒドロキシ安息香酸の選択的生産2014

    • Author(s)
      安藤 拓也,吉野 周平,小林 慶一,桐村 光太郎
    • Organizer
      日本化学会第94春季年回
    • Place of Presentation
      名古屋大学 東山キャンパス(愛知県)
    • Related Report
      2013 Research-status Report
  • [Presentation] Trichosporon moniliiformeの細胞反応による安息香酸からのp-ヒドロキシ安息香酸の高収量生産2014

    • Author(s)
      安藤 拓也,吉野 周平,小林 慶一,桐村 光太郎
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学 生田キャンパス(東京都)
    • Related Report
      2013 Research-status Report
  • [Presentation] クエン酸生産糸状菌Aspergillus nigerにおけるシアン非感受性呼吸系酵素遺伝子の高発現2013

    • Author(s)
      田中 珠,服部 貴澄,小林 慶一,桐村 光太郎
    • Organizer
      第65回日本生物工学会大会
    • Place of Presentation
      広島国際会議場(広島県)
    • Related Report
      2013 Research-status Report
  • [Presentation] クエン酸インジケータ蛍光タンパク質遺伝子を導入した大腸菌における細胞内クエン酸の検出2013

    • Author(s)
      真野敬道,本田 裕樹,小林慶一,桐村 光太郎
    • Organizer
      第65回日本生物工学会大会
    • Place of Presentation
      広島国際会議場(広島県)
    • Related Report
      2013 Research-status Report
  • [Presentation] アコニット酸イソメラーゼ遺伝子を高発現させた組換え大腸菌によるtrans-アコニット酸生産2013

    • Author(s)
      油原 かほり,小林 慶一,桐村 光太郎
    • Organizer
      第65回日本生物工学会大会
    • Place of Presentation
      広島国際会議場(広島県)
    • Related Report
      2013 Research-status Report
  • [Book] ゲルの安定化と機能性付与・次世代への応用開発2013

    • Author(s)
      桐村 光太郎, 小林 慶一, 井手 浩平
    • Total Pages
      5
    • Publisher
      株式会社 技術情報協会
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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