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Simulation on tissue formation through intercellular interaction

Research Project

Project/Area Number 25702025
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypePartial Multi-year Fund
Research Field Biomedical engineering/Biomaterial science and engineering
Research InstitutionKyoto University

Principal Investigator

Inoue Yasuhiro  京都大学, 再生医科学研究所, 准教授 (80442929)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥12,480,000 (Direct Cost: ¥9,600,000、Indirect Cost: ¥2,880,000)
Fiscal Year 2015: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2014: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2013: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Keywords細胞間相互作用 / メカノフィードバック / メカノセンシング / 数理モデル / 形態形成 / 細胞収縮
Outline of Final Research Achievements

In this study, we focused on a mechano-feedback at an intercellular adhesion machinery. At cellular-to-tissue level, we constructed a mathematical model expressing the feedback, and performed simulations on a growing spheroid-like tissue. These simulations revealed that continuous modifications through mechano-feedback are necessary for maintaining a smooth apical surface. At molecular level, we constructed a physical model for explaining actin-based mechano-sensing that is one of necessary components at the mechano-feedback. The model captured the qualitative and quantitative responses of actin-binding proteins to the forces, as observed experimentally. We theoretically suggested that actin-binding proteins can show different kinetic responses even to the same mechanical signal (tension).

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (13 results)

All 2016 2015 2014 2013 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Acknowledgement Compliant: 3 results) Presentation (8 results) (of which Int'l Joint Research: 1 results,  Invited: 3 results) Remarks (2 results)

  • [Journal Article] Mechanosensitive kinetic preference of actin-binding protein to actin filament2016

    • Author(s)
      Yasuhiro Inoue and Taiji Adachi
    • Journal Title

      Physical Review E

      Volume: 93 Issue: 4 Pages: 042403-042403

    • DOI

      10.1103/physreve.93.042403

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Brownian Dynamics Simulation Study on Force-velocity Relation in Actin-based Membrane Protrusion2015

    • Author(s)
      Yasuhiro Inoue, Takeji Deji, Taiji Adachi
    • Journal Title

      Computational Particle Mechanics

      Volume: 2 Issue: 4 Pages: 329-337

    • DOI

      10.1007/s40571-015-0051-x

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Reductions in Anisotropic Errors from Implementation of Phase-Field Wetting Boundary Condition for Off-Grid Objects2015

    • Author(s)
      Yasuhiro Inoue, Kazuki Ishida, Naoki Takada, Masaki Hojo
    • Journal Title

      International Journal of Computational Methods

      Volume: 12 Issue: 06 Pages: 1550042-1550042

    • DOI

      10.1142/s0219876215500425

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 頂端収縮調整に関する細胞メカノフィードバックの数理モデル2016

    • Author(s)
      井上康博、榎本祥英、米村重信、安達泰治
    • Organizer
      第68回日本細胞生物学会大会
    • Place of Presentation
      京都テルサ、京都市
    • Year and Date
      2016-06-15
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Three-Dimensional Vertex Simulation on Smooth Surface Maintenance of Growing Epithelial Tissue Based on Intercellular Mechano-Feedback2016

    • Author(s)
      Yoshihide Enomoto, Yasuhiro Inoue, Shigenobu Yonemura, Taiji Adachi
    • Organizer
      Biophysical Society, 60th Annual Meeting
    • Place of Presentation
      Los Angels Convention Center, LA, USA
    • Year and Date
      2016-02-27
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 細胞における収縮力―形状フィードバックを考慮した上 皮細胞の形態変化シミュレーション2016

    • Author(s)
      榎本祥英, 井上康博, 米村重信, 安達泰治
    • Organizer
      日本機械学会第28回バイオエンジニアリング講演会
    • Place of Presentation
      東京工業大学、東京
    • Year and Date
      2016-01-09
    • Related Report
      2015 Annual Research Report
  • [Presentation] 組織形状平滑化を実現する頂端収縮力調整機能の数理モデリング2015

    • Author(s)
      榎本祥英, 井上康博, 米村重信, 安達泰治
    • Organizer
      日本機械学会2015年度年次大会
    • Place of Presentation
      北海道大学、札幌
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 成長する上皮組織に平滑形状をもたらす細胞間相互作用の数理モデリング2015

    • Author(s)
      榎本祥英, 井上康博,米村重信, 安達泰治
    • Organizer
      一般社団法人日本機械学会 関西支部 第90期定時総会講演会
    • Place of Presentation
      京都
    • Year and Date
      2015-03-16 – 2015-03-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] SMD シミュレーションによるαへリックス構造を有するタンパク質の引張り試験の条件検討2014

    • Author(s)
      大戸康平, 井上康博, 安達泰治
    • Organizer
      一般社団法人 日本機械学会2014年度年次大会
    • Place of Presentation
      東京
    • Year and Date
      2014-09-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] Computational biophysics on epithelial tissue deformation: from molecular to tissue scale2013

    • Author(s)
      Yasuhiro Inoue, Satoru Okuda, Tetsuya Fujii, Kohei Ohto, Taiji Adachi
    • Organizer
      51st annual meeting of the Biophysical Society of Japan
    • Place of Presentation
      京都市
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] アクチン細胞骨格系のマルチスケール計算バイオメカニクス2013

    • Author(s)
      井上康博
    • Organizer
      神戸大学 第7回協定講座シンポジウム「ロボティクスとバイオメカニクスの計算科学的接点」
    • Place of Presentation
      神戸大学
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Remarks] 京都大学 教育研究活動データベース

    • URL

      http://kyouindb.iimc.kyoto-u.ac.jp/j/lS2qY

    • Related Report
      2015 Annual Research Report
  • [Remarks] 京都大学 教育研究活動データベース

    • URL

      http://kyouindb.iimc.kyoto-u.ac.jp/j/lS2qY

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2013-05-21   Modified: 2019-07-29  

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