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Analysis of spatial and temporal aspects of chemotaxis using a dynamic gradient generator

Research Project

Project/Area Number 25840069
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Cell biology
Research InstitutionThe University of Tokyo

Principal Investigator

NAKAJIMA Akihiko  東京大学, 総合文化研究科, 特任助教 (90612119)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords走化性 / 粘菌 / 自己組織化 / 進行波 / 方向検知 / 時間センシング / マイクロ流路 / 適応 / 適応応答 / 整流性 / 細胞運動 / 整流作用 / 細胞性粘菌 / ライブセルイメージング / 微小流路 / 数理モデル / シグナル伝達 / 時空間動態
Outline of Final Research Achievements

Aggregation of Dictyostelium discoideum is mediated by chemotaxis towards propagating waves of chemoattractant cAMP. Because the direction of chemoattractant gradient reversed during the wave passage, how unidirectional migration is achieved remains unresolved. By precise microfluidics emulation of the dynamic chemoattractant field we demonstrate that, in Dictyostelium cells, directional migration as well as activation of small guanosine triphosphatase Ras at the leading edge is suppressed when the chemoattractant concentration is decreasing over time. The ‘rectification’ of directional sensing occurs only at an intermediate range of wave speed and its optimum is at about a period of 6 minutes which is consistent with the wave period typically observed in aggregating cells. These results indicate that the ability of Dictyostelium cells to move only in the wavefront is closely associated with rectification of adaptive response combined with local activation and global inhibition.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (19 results)

All 2016 2015 2014 2013 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (12 results) (of which Int'l Joint Research: 2 results,  Invited: 4 results) Book (3 results) Remarks (2 results)

  • [Journal Article] Cellular Sensing of Time and Space: Chemotactic Wave Paradox and Rectification of the Leading Edge Response2016

    • Author(s)
      中島昭彦、石原秀至、澤井哲
    • Journal Title

      Seibutsu Butsuri

      Volume: 56 Issue: 2 Pages: 098-101

    • DOI

      10.2142/biophys.56.098

    • NAID

      130005140934

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Rectified directional sensing in long-range cell migration2014

    • Author(s)
      Akihiko Nakajima, Shuji Ishihara, Daisuke Imoto, and Satoshi Sawai
    • Journal Title

      Nature Communications

      Volume: 5 Issue: 1

    • DOI

      10.1038/ncomms6367

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Delineating temporal and spatial aspects of directional sensing in migrating cells2016

    • Author(s)
      Akihiko Nakajima
    • Organizer
      Fourth annual winter q-bio meeting
    • Place of Presentation
      Hawaii (USA)
    • Year and Date
      2016-02-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Dissecting temporal and spatial information for direction sensing in migrating cells2015

    • Author(s)
      Akihiko Nakajima and Shuji Ishihara
    • Organizer
      16th International conference on systems biology ICSB 2015
    • Place of Presentation
      Singapore (Singapore)
    • Year and Date
      2015-11-23
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 整流的な細胞の移動にみられる時間空間情報の統合メカニズムとその操作2015

    • Author(s)
      中島昭彦、石原秀至、井元大輔、島田奈央、澤井哲
    • Organizer
      生命動態の分子メカニズムと数理~生命動態システム科学四拠点・CREST・PRESTO合 同シンポジウム
    • Place of Presentation
      京都大学芝蘭会館(京都府・京都市左京区)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Related Report
      2014 Research-status Report
  • [Presentation] Rectified directional sensing by integration of spatial and temporal information2015

    • Author(s)
      Akihiko Nakajima, Shuji Ishihara, Daisuke Imoto, Satoshi Sawai
    • Organizer
      Directed Cell Migration, Gordon Research Conference
    • Place of Presentation
      Hotel Galvez, Galveston, Texas(USA)
    • Year and Date
      2015-01-28 – 2015-01-29
    • Related Report
      2014 Research-status Report
  • [Presentation] 細胞の走化性にみられる時間空間認識機構の定量生物学的解析2015

    • Author(s)
      中島昭彦
    • Organizer
      定量生物の会第7回年会
    • Place of Presentation
      九州大学筑紫キャンパス(福岡県・春日市)
    • Year and Date
      2015-01-12
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 細胞の走化性応答にみられる時間空間情報の統合:数理と実験の融合的アプローチ2014

    • Author(s)
      中島昭彦、石原秀至、井元大輔、澤井哲
    • Organizer
      生命ダイナミクスの数理とその応用-異分野とのさらなる融合-
    • Place of Presentation
      東京大学駒場キャンパス(東京都・目黒区)
    • Year and Date
      2014-12-03
    • Related Report
      2014 Research-status Report
  • [Presentation] Experimental and theoretical approaches for dissecting cellular dynamics in complex chemoattractant fields2014

    • Author(s)
      Akihiko Nakajima
    • Organizer
      The joint annual meeting of the japanese society for mathematical biology and the society for mathematical biology
    • Place of Presentation
      大阪府立国際会議場(大阪府・大阪市北区)
    • Year and Date
      2014-07-31
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] How Do Cells Know in Which Direction to Move in Spatiotemporal Chemical Environments?2014

    • Author(s)
      Akihiko Nakajima
    • Organizer
      iCeMS Symposium Mesoscopic Chemical Biology: Integrated Chemical-Physical Systems Towards Cell Control
    • Place of Presentation
      京都府京都市京都大学
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 時空間的にダイナミックな化学誘因場における細胞移動メカニズム2014

    • Author(s)
      中島昭彦、石原秀至、井元大輔、澤井哲
    • Organizer
      数学・数理科学と諸科学・産業との恊働によるイノベーション創出のための研究促進プログラム「生命ダイナミックスの数理とその応用」
    • Place of Presentation
      東京都目黒区東京大学駒場キャンパス
    • Related Report
      2013 Research-status Report
  • [Presentation] 時空間的に変動するcAMP場に対する細胞応答と進行波走化性2013

    • Author(s)
      中島昭彦、石原秀至、井元大輔、澤井哲
    • Organizer
      日本細胞性粘菌学会第3回例会
    • Place of Presentation
      京都府京都市京都大学理学研究科セミナーハウス
    • Related Report
      2013 Research-status Report
  • [Presentation] Directional sensing and rectified cell motion towards temporally changing gradient2013

    • Author(s)
      Akihiko Nakajima, Shuji Ishihara, Daisuke Imoto, Satoshi Sawai
    • Organizer
      日本生物物理学会第51回年会
    • Place of Presentation
      京都府京都市国立京都国際会館
    • Related Report
      2013 Research-status Report
  • [Presentation] 時空間的にダイナミックな化学誘因場における細胞走性メカニズム2013

    • Author(s)
      中島昭彦、石原秀至、井元大輔、澤井哲
    • Organizer
      定量生物の会第6回年会
    • Place of Presentation
      大阪府吹田市大阪大学吹田キャンパス銀杏会館
    • Related Report
      2013 Research-status Report
  • [Book] "Dissecting Spatial and Temporal Sensing in Dictyostelium Chemotaxis Using a Wave Gradient Generator" Chemotaxis: Methods and Protocols 2nd Ed., Methods in Molecular Biology2016

    • Author(s)
      Akihiko Nakajima & Satoshi Sawai (ed. Dale Hereld, Tian Jin)
    • Total Pages
      400
    • Publisher
      Springer
    • Related Report
      2015 Annual Research Report
  • [Book] 「動く細胞の定量的動態解析」 画像解析手取り足とりガイド第2章-92014

    • Author(s)
      澤井哲、井元大輔、福神史仁、中島昭彦
    • Publisher
      羊土社
    • Related Report
      2014 Research-status Report
  • [Book] 『実験医学』vol.31, No.8 「一細胞イメージングから見る細胞内シグナルの自己組織化現象」([特集]生命システムを定量する 企画/小林徹也)2013

    • Author(s)
      澤井哲、石原秀至、中島昭彦
    • Total Pages
      7
    • Publisher
      羊土社
    • Related Report
      2013 Research-status Report
  • [Remarks] 細胞の「整流作用」? 粘菌が波を使って集まれる仕組み

    • URL

      http://www.u-tokyo.ac.jp/ja/utokyo-research/research-news/rectifying-property-dictates-aggregating-response-in-cellular-slime-mold/

    • Related Report
      2014 Research-status Report
  • [Remarks] 【研究発表】粘菌の「集まれ!」の合図への応答にはダイオードのような整流作用が働いている。

    • URL

      http://www.c.u-tokyo.ac.jp/info/news/topics/20141113131243.html

    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

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