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An Approach to Novel Structure Design by Combining Discrete Methods and Statistical Methods

Research Project

Project/Area Number 26240034
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Intelligent informatics
Research InstitutionKyoto University

Principal Investigator

AKUTSU Tatsuya  京都大学, 化学研究所, 教授 (90261859)

Co-Investigator(Kenkyū-buntansha) 林田 守広  松江工業高等専門学校, その他部局等, 准教授 (40402929)
永持 仁  京都大学, 情報学研究科, 教授 (70202231)
細川 浩  京都大学, 情報学研究科, 講師 (90359779)
Research Collaborator MAEGAWA shingo  京都大学, 大学院情報学研究科, 助教 (30467401)
Project Period (FY) 2014-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥36,790,000 (Direct Cost: ¥28,300,000、Indirect Cost: ¥8,490,000)
Fiscal Year 2017: ¥10,010,000 (Direct Cost: ¥7,700,000、Indirect Cost: ¥2,310,000)
Fiscal Year 2016: ¥10,010,000 (Direct Cost: ¥7,700,000、Indirect Cost: ¥2,310,000)
Fiscal Year 2015: ¥10,010,000 (Direct Cost: ¥7,700,000、Indirect Cost: ¥2,310,000)
Fiscal Year 2014: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Keywordsケモインフォマティクス / 構造列挙 / グラフアルゴリズム / カーネル法 / 生物情報ネットワーク / 化学構造 / 特徴ベクトル / ヶモインフォマティクス / グラフ列挙
Outline of Final Research Achievements

We developed enumeration algorithms for various subclasses of chemical graphs, which include tree structured graphs with benzene and naphthalene rings as nodes, subclasses of 2-edge and 3-edge augmented tree structured graphs, and tree structured graphs with arbitrary ring structures as nodes. Furthermore, we improved our previously developed branch-and-bound algorithm for enumeration of chemical trees by introducing a new cut operation named Resource Cut. In addition, we developed computational methods for protein complex prediction, protein-protein interaction prediction, protein cleavage site prediction and RNA sequence analysis, the effectiveness of some of which was verified via biological experiments.

Academic Significance and Societal Importance of the Research Achievements

本研究により、従来手法と比較し、より効率的に列挙可能な化学構造のクラスを大きく拡大することができた。化学構造の列挙は新規薬剤の設計などに応用できる可能性があるため、重要な結果であると考えられる。ただし、実際に応用するには様々な制約を取り入れることが必要であり、さらなる改良、拡張が必要である。タンパク質相互作用予測、複合体予測、切断部位予測、RNA配列解析についても新規手法を開発することができた。これらはタンパク質やRNAの機能をその配列データから推定するために有用であり、その結果、生体生体高分子の機能や役割の解明に貢献する可能性があり、さらには、医療などに役立つ可能性がある。

Report

(5 results)
  • 2018 Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (55 results)

All 2018 2017 2016 2015 2014 Other

All Int'l Joint Research (5 results) Journal Article (31 results) (of which Int'l Joint Research: 16 results,  Peer Reviewed: 31 results,  Open Access: 17 results,  Acknowledgement Compliant: 16 results) Presentation (15 results) (of which Int'l Joint Research: 6 results) Remarks (4 results)

  • [Int'l Joint Research] モナーシュ大学(オーストラリア)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] パリ工科大学(フランス)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] 大連交通大学/香港大学/西安交通大学(中国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] モナーシュ大学(オーストラリア)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] 国立交通大学(台湾)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Euler string-based compression of tree-structured data and its application to analysis of RNAs2018

    • Author(s)
      L. Liu, T. Mori, Y. Zhao, M. Hayashida and T. Akutsu
    • Journal Title

      Current Bioinformatics

      Volume: 13 Issue: 1 Pages: 25-33

    • DOI

      10.2174/1574893611666160608102231

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] PROSPERous: high-throughput prediction of substrate cleavage sites for 90 proteases with improved accuracy2018

    • Author(s)
      J. Song, F. Li, A. Leier, T. T. Marquez-Lago. T. Akutsu, G. Haffari, K-C. Chou, G. I. Webb and R. N. Pike
    • Journal Title

      Bioinformatics

      Volume: 34 Issue: 4 Pages: 684-687

    • DOI

      10.1093/bioinformatics/btx670

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] PREvaIL, an integrative approach for inferring catalytic residues using sequence, structural, and network features in a machine-learning framework2018

    • Author(s)
      J. Song, F. Li, K. Takemoto, G. HaHaffari, T. Akutsu, K-C. Chou, and G. I. Webb
    • Journal Title

      Journal of Theoretical Biology

      Volume: 443 Pages: 125-137

    • DOI

      10.1016/j.jtbi.2018.01.023

    • NAID

      120007026466

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Improving prediction of heterodimeric protein complexes using combination with pairwise kernel2018

    • Author(s)
      Ruan Peiying、Hayashida Morihiro、Akutsu Tatsuya、Vert Jean-Philippe
    • Journal Title

      BMC Bioinformatics

      Volume: 19 Issue: S1 Pages: 39-39

    • DOI

      10.1186/s12859-018-2017-5

    • NAID

      120006537092

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Averaged n-dependence estimators for positive unlabeled learning2017

    • Author(s)
      F. Li, J. Song, C. Li, T. Akutsu and Y. Zhang
    • Journal Title

      ICIC Express Letters, Part B: Applications

      Volume: 8 Pages: 1287-1297

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] hosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection2017

    • Author(s)
      J. Song, H. Wang, J. Wang, A, Leier, T. Marquez-Lago, B. Yang, Z. Zhang, T. Akutsu, G. I. Webb and R. J. Daly
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1

    • DOI

      10.1038/s41598-017-07199-4

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Critical controllability analysis of directed biological networks using efficient graph reduction2017

    • Author(s)
      M. Ishitsuka1, T. Akutsu, J. C. Nacher
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 14361-14361

    • DOI

      10.1038/s41598-017-14334-8

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chordin and dickkopf-1b are essential for the formation of head structures through activation of the FGF signaling pathway in zebrafish2017

    • Author(s)
      S. Tanaka, H. Hosokawa, E. S. Weinberg, S. Maegawa
    • Journal Title

      Developmental Biology

      Volume: 424 Issue: 2 Pages: 189-197

    • DOI

      10.1016/j.ydbio.2017.02.018

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Discrimination of singleton and periodic attractors in Boolean networks2017

    • Author(s)
      Cheng Xiaoqing、Tamura Takeyuki、Ching Wai-Ki、Akutsu Tatsuya
    • Journal Title

      Automatica

      Volume: 84 Pages: 205-213

    • DOI

      10.1016/j.automatica.2017.07.012

    • NAID

      120006542020

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data2017

    • Author(s)
      Y. Kato, T. Mori, K. Sato, S. Maegawa, H. Hosokawa, T. Akutsu
    • Journal Title

      Bioinformatics

      Volume: 33 Issue: 2 Pages: 202-209

    • DOI

      10.1093/bioinformatics/btw603

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] SecretEPDB: a comprehensive web-based resource for secreted effector proteins of the bacterial types III, IV and VI secretion systems2017

    • Author(s)
      Y. An, J. Wang, J. Song, C. Li, J. Revote, T. Naderer, M. Hayashida, T. Akutsu, Y. Zhang, G. I. Webb, T. Lithgow
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 41031-41031

    • DOI

      10.1038/srep41031

    • NAID

      120005997781

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] On the parameterized complexity of associative and commutative unification2017

    • Author(s)
      T. Akutsu, J. Jansson, A. Takasu, T. Tamura
    • Journal Title

      Theoretical Computer Science

      Volume: 660 Pages: 57-74

    • DOI

      10.1016/j.tcs.2016.11.026

    • NAID

      120006537095

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Complex network-based approaches to biomarker discovery2016

    • Author(s)
      M. Hayashida, T. Akutsu
    • Journal Title

      Biomarkers in Medicine

      Volume: 10 Pages: 621-632

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Enumeration method for structural isomers containing user-defined structures based on breadth-first search approach2016

    • Author(s)
      J. Jindalertudomdee, M. Hayashida, T. Akutsu
    • Journal Title

      Journal of Computational Biology

      Volume: 23 Issue: 8 Pages: 625-640

    • DOI

      10.1089/cmb.2016.0056

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] LBSizeCleav: improved support vector machine (SVM)-based prediction of Dicer cleavage sites using loop/bulge length2016

    • Author(s)
      Y. Bao, M. Hayashida, T. Akutsu
    • Journal Title

      BMC Bioinformatics

      Volume: 17 Issue: 1 Pages: 487-487

    • DOI

      10.1186/s12859-016-1353-6

    • NAID

      120005973378

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Host-pathogen protein interaction prediction based on local topology structures of a protein interaction network2016

    • Author(s)
      J. Jindalertudomdee, M. Hayashida, J. Song, T. Akutsu
    • Journal Title

      Proc. IEEE 16th International Conference on Bioinformatics and Bioengineering

      Volume: - Pages: 7-12

    • DOI

      10.1109/bibe.2016.26

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Finding influential genes using gene expression data and Boolean models of metabolic networks2016

    • Author(s)
      T. Tamura, C-Y. Lin, J-M. Yang, T. Akutsu
    • Journal Title

      Proc. IEEE 16th International Conference on Bioinformatics and Bioengineering

      Volume: - Pages: 57-63

    • DOI

      10.1109/bibe.2016.25

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Enumeration method for tree-like chemical compounds with benzene rings and naphthalene rings by breadth-first search order2016

    • Author(s)
      J. Jindalertudomdee, M. Hayashida, Y. Zhao, T. Akutsu
    • Journal Title

      BMC Bioinformatics

      Volume: 17 Issue: 1 Pages: 113-113

    • DOI

      10.1186/s12859-016-0962-4

    • NAID

      120005822781

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Maximum margin classifier working in a set of strings2016

    • Author(s)
      H. Koyano, M. Hayashida, T. Akutsu
    • Journal Title

      Proceedings of the Royal Society A

      Volume: 472 Issue: 2187 Pages: 20150551-20150551

    • DOI

      10.1098/rspa.2015.0551

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Enumerating naphthalene isomers of tree-like chemical graphs2016

    • Author(s)
      F. He, A. Hanai, H. Nagamochi, T. Akutsu
    • Journal Title

      Proc. 9th International Joint Conference on Biomedical Engineering Systems and Technologies

      Volume: 3 Pages: 258-265

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Grammar-based compression approach to extraction of common rules among multiple trees of glycans and RNAs2015

    • Author(s)
      Y. Zhao, M. Hayashida, Y. Cao, J. Hwang, T. Akutsu
    • Journal Title

      BMC Bioinformatics

      Volume: 16 Issue: 1 Pages: 128-128

    • DOI

      10.1186/s12859-015-0558-4

    • NAID

      120005749951

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Parallelization of enumerating tree-like chemical compounds by breadth-first search order2015

    • Author(s)
      M. Hayashida, J. Jindalertudomdee, Y. Zhao, T. Akutsu
    • Journal Title

      BMC Medical Genomics

      Volume: 8 (Suppl 2) Issue: S2

    • DOI

      10.1186/1755-8794-8-s2-s15

    • NAID

      120005947140

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Computational methods for modification of metabolic networks2015

    • Author(s)
      T. Tamura, W. Liu, T. Akutsu
    • Journal Title

      Computational and Structural Biotechnology Journal

      Volume: 12 Pages: 376-381

    • DOI

      10.1016/j.csbj.2015.05.004

    • NAID

      120005712915

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] On the complexity of finding a largest common subtree of bounded degree2015

    • Author(s)
      T. Akutsu, T. Tamura, A.A. Melkman, A. Takasu
    • Journal Title

      Theoretical Computer Science

      Volume: 590 Pages: 2-16

    • DOI

      10.1016/j.tcs.2014.10.012

    • NAID

      120005689204

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Similar subtree search using extended tree inclusion2015

    • Author(s)
      T. Mori, A. Takasu, J. Jansson, J. Hwang, T. Tamura, T. Akutsu
    • Journal Title

      IEEE Transactions on Knowledge and Data Engineering

      Volume: 27 Issue: 12 Pages: 3360-3373

    • DOI

      10.1109/tkde.2015.2457922

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Matrix Network: A New Data Structure for Efficient Enumeration of Microstates of a Genetic Regulatory Network2015

    • Author(s)
      X. Cong, T. Akutsu
    • Journal Title

      Journal of Information Processing

      Volume: 23 Issue: 6 Pages: 804-813

    • DOI

      10.2197/ipsjjip.23.804

    • NAID

      130005109167

    • ISSN
      1882-6652
    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Determining associations between human diseases and non-coding RNAs with critical roles in network control2015

    • Author(s)
      H. Kagami, T. Akutsu, S. Maegawa, H. Hosokawa, J. C. Nacher
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 14577-14577

    • DOI

      10.1038/srep14577

    • NAID

      120005818233

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Computing smallest intervention strategies for multiple metabolic networks in a boolean model.2015

    • Author(s)
      Lu, W., Tamura, T., Song, J. & Akutsu, T.
    • Journal Title

      Journal of computational biology

      Volume: 22 Issue: 2 Pages: 85-110

    • DOI

      10.1089/cmb.2014.0274

    • NAID

      120005657917

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Efficient Enumeration of Monocyclic Chemical Graphs with Given Path Frequencies2014

    • Author(s)
      Masaki Suzuki, Hiroshi Nagamochi, Tatsuya Akutsu
    • Journal Title

      Journal of Cheminformatics

      Volume: 6 Issue: 1 Pages: 31-31

    • DOI

      10.1186/1758-2946-6-31

    • NAID

      120005456003

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Prediction of Protein-protein Interaction Strength Using Domain Features with Supervised Regression2014

    • Author(s)
      Kamada, M., Sakuma, Y., Hayashida, M., Akutsu, T.
    • Journal Title

      The Scientific World Journal

      Volume: 2014 Pages: 240673-240673

    • DOI

      10.1155/2014/240673

    • NAID

      120005462601

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Proteome Compression via Protein Domain Compositions2014

    • Author(s)
      Hayashida, M., Ruan, P., Akutsu, T.
    • Journal Title

      Methods

      Volume: 67 Issue: 3 Pages: 380-385

    • DOI

      10.1016/j.ymeth.2014.01.012

    • NAID

      120005466444

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Resource cut, a new bounding procedure to algorithms for Enumerating tree-like chemical graphs2018

    • Author(s)
      Y. Nishiyama, A. Shurbevski, H. Nagamochi and T. Akutsu
    • Organizer
      The Sixteenth Asia Pacific Bioinformatics Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Enumerating chemical mono-block 3-augmented trees with two junctions2018

    • Author(s)
      Y. Tamura, A. Shurbevski, H. Nagamochi, and T. Akutsu
    • Organizer
      The 8th International Conference on Bioscience, Biochemistry and Bioinformatics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ncRNA-disease association prediction based on sequence information and tripartite network2018

    • Author(s)
      T. Mori, H. Ngouv, M. Hayashida, T. Akutsu and J. Nacher
    • Organizer
      The Sixteenth Asia Pacific Bioinformatics Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Grammar-based compression for directed and undirected generalized series-parallel graphs using integer linear programming2018

    • Author(s)
      M. Hayashida, H. Koyano, T. Akutsu:
    • Organizer
      The 11th International Joint Conference on Biomedical Engineering Systems and Technologies
    • Related Report
      2017 Annual Research Report
  • [Presentation] A short review of methods for Caspase cleavage site prediction2017

    • Author(s)
      B. Yu、M. Simone、T. Takeyuki、K. Mayumi、M. Shingo、H. Hiroshi、S. Jiangning、T. Akutsu
    • Organizer
      情報処理学会第51回バイオ情報学研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] The 28th International Conference on Genome Informatics2017

    • Author(s)
      P. Ruan, M. Hayashida, T. Akutsu and J-P. Vert
    • Organizer
      Improving prediction of heterodimeric protein complexes using combination with pairwise kernel
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 最小支配集合に基づく有向生体ネットワーク解析のための高速アルゴリズム2017

    • Author(s)
      石塚雅之, 阿久津達也, ナチェルホセ
    • Organizer
      情報処理学会第113回MPS・第50回BIO合同研究発表会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Host-pathogen protein interaction prediction based on local topology structures of a protein interaction network2016

    • Author(s)
      J. Jindalertudomdee, M. Hayashida, J. Song, T. Akutsu
    • Organizer
      IEEE 16th International Conference on Bioinformatics and Bioengineering
    • Place of Presentation
      台湾・台中・Sprendor Hotel
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Minimum Dominating Set-based Approaches for Analyzing and Controlling Biological Networks2016

    • Author(s)
      T. Tamura, C-Y. Lin, J-M. Yang, T. Akutsu
    • Organizer
      IEEE 16th International Conference on Bioinformatics and Bioengineering
    • Place of Presentation
      台湾・台中・Sprendor Hotel
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] On the efficient identification of proteins with control roles in large networks2015

    • Author(s)
      M. Ishitsuka, T. Akutsu, J. C. Nacher
    • Organizer
      生命医薬情報学連合大会2015年大会
    • Place of Presentation
      京都大学宇治キャンパス
    • Year and Date
      2015-10-29
    • Related Report
      2015 Annual Research Report
  • [Presentation] Prediction of ncRNA-disease association based on sequence expression and tripartite network2015

    • Author(s)
      H. Ngouv, M. Hayashida, J.C. Nacher, T. Akutsu
    • Organizer
      生命医薬情報学連合大会2015年大会
    • Place of Presentation
      京都大学宇治キャンパス
    • Year and Date
      2015-10-29
    • Related Report
      2015 Annual Research Report
  • [Presentation] Integer programming-based method for designing synthetic metabolic networks by Minimum Reaction Insertion in a Boolean Model2015

    • Author(s)
      W. Lu, T. Tamura, J. Song, T. Akutsu
    • Organizer
      情報処理学会 バイオ情報学研究会
    • Place of Presentation
      慶応義塾大学
    • Year and Date
      2015-09-12
    • Related Report
      2015 Annual Research Report
  • [Presentation] ナフタレン環を持つ木状化学構造の幅優先探索による列挙手法2014

    • Author(s)
      Jindalertudomdee Jira, 林田守広, 趙楊, 阿久津達也
    • Organizer
      第37回情報化学討論会
    • Place of Presentation
      豊橋商工会議所
    • Year and Date
      2014-11-27 – 2014-11-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] Parallelization of Enumerating Tree-like Chemical Compounds by Breadth-first Search Order2014

    • Author(s)
      Morihiro Hayashida, Jira Jindalertudomdee, Yang Zhao, Tatsuya Akutsu
    • Organizer
      The 8th International Conference on Systems Bioloy
    • Place of Presentation
      Qingdao, China
    • Year and Date
      2014-10-24 – 2014-10-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Computing Smallest Intervention Strategies for Multiple Metabolic Networks in a Boolean Model2014

    • Author(s)
      Wei Lu, Takeyuki Tamura, Jiangning Song, Tatsuya Akutsu
    • Organizer
      14th International Workshop on Bioinformatics and Systems Biology
    • Place of Presentation
      Humboldt University, Berlin, Germany
    • Year and Date
      2014-07-20 – 2014-07-23
    • Related Report
      2014 Annual Research Report
  • [Remarks] 木状化合物構造列挙サーバ

    • URL

      http://sunflower.kuicr.kyoto-u.ac.jp/tools/enumol/

    • Related Report
      2017 Annual Research Report
  • [Remarks] 木状化学構造列挙サーバ

    • URL

      http://sunflower.kuicr.kyoto-u.ac.jp/tools/enumol2/

    • Related Report
      2016 Annual Research Report
  • [Remarks] 木状化学構造列挙サーバ

    • URL

      http://sunflower.kuicr.kyoto-u.ac.jp/tools/enumol/

    • Related Report
      2015 Annual Research Report
  • [Remarks] EnuMol (ENUmerating MOLecular structures)

    • URL

      http://sunflower.kuicr.kyoto-u.ac.jp/tools/enumol/

    • Related Report
      2014 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2022-02-16  

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