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Horizontal Gene Transfer from snakes to frogs: investigations of the phylogenetic and geographic origins and vector organisms

Research Project

Project/Area Number 26291080
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biodiversity/Systematics
Research InstitutionHiroshima University

Principal Investigator

Kurabayashi Atsushi  広島大学, 両生類研究センター, 助教 (00327701)

Co-Investigator(Kenkyū-buntansha) 大島 一彦  長浜バイオ大学, バイオサイエンス学部, 准教授 (60282852)
松田 洋一  名古屋大学, 生命農学研究科, 教授 (70165835)
森 哲  京都大学, 理学研究科, 准教授 (80271005)
細 将貴  京都大学, 白眉センター, 特定助教 (80557695)
佐藤 宏  山口大学, 共同獣医学部, 教授 (90211945)
長谷川 英男  大分大学, 医学部, 教授 (00126442)
Co-Investigator(Renkei-kenkyūsha) OTA Hidetoshi  兵庫県立大学, 自然・環境科学研究所, 教授 (70165835)
Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥15,730,000 (Direct Cost: ¥12,100,000、Indirect Cost: ¥3,630,000)
Fiscal Year 2017: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2016: ¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Fiscal Year 2015: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2014: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Keywords遺伝子水平伝播 / 生物系統地理 / 爬虫両棲類 / 寄生虫 / ベクター生物 / マダガスカル / 次世代シークエンス / 分子系統解析 / 転移因子 / 両生類 / 爬虫類 / 魚類 / 分子系統 / 次世代シークエンサー / 系統地理 / ゲノム生物学 / 系統分類学 / 遺伝子の水平伝播 / 国際研究者交流_アフリカ_ドイツ / 国際情報交換_アフリカ_アメリカなど / ヘビ類 / 生物地理学
Outline of Final Research Achievements

We had discovered a unique LINE retrotransposon (hereinafter TE-X) that horizontally transferred from snake to frog. In this study, we aimed to elucidate the geographic areas and phylogenetic origins of the horizontal transfer (HT) events and identify the vector organisms intermediate the HT. We collected 194, 139, and 166 specimens from 29 anuran families, 17 snake families, and parasite and blood-sacking invertebrate taxa of five animal phyla, respectively. We PCR amplified the TE-X from these specimens and analyzed them using PCR and next generation sequencer. Finally we performed molecular phylogenetic analyses of the resultant TE-X sequences. As the results, we revealed the following matters. The TE-X HTs have occurred many times in various parts of the world and the transfer would be mediated by various parasites and blood sacking animals. Remarkably, our data seem to show that the TE-X HT is continuing among many vertebrate taxa in Madagascar.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (28 results)

All 2018 2017 2016 2015 2014 Other

All Int'l Joint Research (15 results) Journal Article (6 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 6 results,  Open Access: 2 results,  Acknowledgement Compliant: 5 results) Presentation (7 results) (of which Int'l Joint Research: 5 results,  Invited: 3 results)

  • [Int'l Joint Research] ブラウンシュバイク工科大学/ミュンヘン動物学博物館(ドイツ)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ベルギー王立自然史博物館(ベルギー)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ニューサウスウェールズ大学(オーストラリア)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] アンタナナリボ大学(マダガスカル)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ビショップ博物館(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ブラウンシュバイク工科大学(ドイツ)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ニューサウスウェールズ大学(オーストラリア)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ベルギー王立自然史博物館(ベルギー)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ビショップ博物館(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ベトナム科学技術アカデミー/ベトナム国立自然史博物館(ベトナム)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ブラウンシュバイク工科大学(ドイツ)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] ビショップ博物館(米国)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] 南オーストラリア博物館(オーストラリア)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] ベトナム科学技術アカデミー/ビン大学(ベトナム)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Mechanisms underlying variations in the dentition asymmetry of Asian snail-eating snakes.2018

    • Author(s)
      Hoso, M.
    • Journal Title

      Ecological Research Monographs

      Volume: 印刷中

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Asymmetry of mandibular dentition is associated with dietary specialization in snail-eating snakes.2017

    • Author(s)
      Hoso, M.
    • Journal Title

      PeerJ

      Volume: 5 Pages: e3011-e3011

    • DOI

      10.7717/peerj.3011

    • NAID

      120005997653

    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Roles of maternal effects in maintaining genetic variation: Maternal storage effect.2017

    • Author(s)
      Masato Yamamichi and Masaki Hoso
    • Journal Title

      Evolution

      Volume: 71 Issue: 2 Pages: 449-457

    • DOI

      10.1111/evo.13118

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Scanning electron microscopy of Strongyluris calotis (Nematoda: Ascaridida: Heterakidae) in the large intestine of agamid lizards in Asia2016

    • Author(s)
      Tran, B.T., H. Sato, H. Hasegawa, C.H. Diong, & P.V. Luc
    • Journal Title

      Jpn. J. Vet. Parasitol.

      Volume: 14 Pages: 13-21

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Endoparasites of Vietnamese lizards recorded in the last 50 years(1966-2015)2016

    • Author(s)
      Tran, B.T., S.T. Nguyen, T.T. Nguyen, P.V. Luc, E. Mafie, F.H. Rupa, & H. Sato
    • Journal Title

      Jpn. J. Vet. Parasitol.

      Volume: 15 Pages: 34-58

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Morphological and molecular genetic diversity of Strongyluris calotis (Nematoda: Ascaridida: Heterakidae) in South East and East Asian lizards2016

    • Author(s)
      Binh Thi Tran, An Vinh Ong, Pham Van Luc, and Hiroshi Sato
    • Journal Title

      Parasitology Research

      Volume: 印刷中 Issue: 7 Pages: 2807-2816

    • DOI

      10.1007/s00436-016-5030-5

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] A unique gene horizontal transfer from snake to frog frequently occurred in Madagascar2017

    • Author(s)
      Kurabayashi, A.
    • Organizer
      CPIS International Symposium on Biodiversity in Madagascar: Advancement of Ancient DNA Studies for Exploring Biodiversity in Lost Ecological Systems
    • Place of Presentation
      Kanagawa, Japan
    • Year and Date
      2017-02-04
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] ヘビからカエルへの遺伝子水平伝播:発見の経緯と地理的特異性2017

    • Author(s)
      倉林 敦, 佐藤祐輔, 神林千晶, 掛橋竜祐, 水野英明, 大島一彦, 熊澤慶伯, Zoltan T. Nagy, 森 哲, Allen Allison, Stephen C. Donnellan, 太田英利, 細将貴, 古野伸明, 佐藤宏, Miguel Vences
    • Organizer
      第3回大会次世代両生類研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Investigation of Potential Vectors that Mediated the Horizontal Gene Transfer from Snakes to Frogs.2017

    • Author(s)
      Kambayashi, C., R. Kakehashi, Y. Sato, T. Yanagida, H. Sato, A. Kurabayashi.
    • Organizer
      The 8th International Conference on Global Resource Conservation
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Gene horizontal transfer from predator to prey: its phylogeny, frequency and locality.2017

    • Author(s)
      Kurabayashi, A.
    • Organizer
      The 8th International Conference on Global Resource Conservation
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] A unique gene horizontal transfer from predator to prey occurred between distinct vertebrate classes.2016

    • Author(s)
      Sato, Y., H. Mizuno, K. Ohshima, Y. Kumazawa, Z.T. Nagy, A. Mori, A. Allison, S.C. Donnellan, H. Ota, H. Masaki, N. Furuno, M. Vences, & A. Kurabayashi
    • Organizer
      The 22nd International Congress of Zoology
    • Place of Presentation
      Okinawa, Japan
    • Year and Date
      2016-11-17
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Horizontal gene transfer from snakes to frogs2015

    • Author(s)
      Atsushi Kurabayashi, Hideaki Mizuno, Kazuhiko Ohshima, Miguel Vences
    • Organizer
      The 1st Symposium on South East Asia Herpetology and Envenomation
    • Place of Presentation
      ブラビジャヤ大学, インドネシア
    • Year and Date
      2015-08-28
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ヘビからカエルへの遺伝子水平伝播:発見の経緯と発生頻度の地理的相違2014

    • Author(s)
      倉林敦, 住田正幸, 大島一彦, Miguel Vences
    • Organizer
      日本爬虫両棲類学会 第53回大会
    • Place of Presentation
      神戸山手大学
    • Year and Date
      2014-11-08 – 2014-11-09
    • Related Report
      2014 Annual Research Report

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Published: 2014-04-04   Modified: 2022-02-28  

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