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Localization and Alignment of Non-rigid Organs by Exhaustive Search of Position, Orientation,Scale and Deformation Parameters

Research Project

Project/Area Number 26330212
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Perceptual information processing
Research InstitutionRitsumeikan University

Principal Investigator

Xu Gang  立命館大学, 情報理工学部, 教授 (90226374)

Co-Investigator(Kenkyū-buntansha) 陳 延偉  立命館大学, 情報理工学部, 教授 (60236841)
韓 先花  国立研究開発法人産業技術総合研究所, 人工知能研究センター, 主任研究員 (60469195)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2016: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords画像認識 / 医用画像処理 / 3次元 / アラインメント / 変形 / ボリュームデータ / CT / MRI / 3次元
Outline of Final Research Achievements

This research shows that against the intuition of impossibility of exhaustive search of a relatively large number of parameters, by a number of techniques to reduce computational cost, we succeeded in localization and alignment of livers in MR volume data by exhaustive search of 15 parameters including 3 for position, 3 for orientation, 1 for scale, and 8 for deformation. Deformation is represented as a linear combination of principal components of a set of some 50 aligned 3D sample models.
Using GPU for acceleration, we were able to find livers withour any human intervention at a speed of 1.5 minutes, which is now manually done by human operators at a speed of half a day.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (21 results)

All 2017 2016 2015 2014

All Journal Article (10 results) (of which Peer Reviewed: 10 results,  Open Access: 4 results,  Acknowledgement Compliant: 2 results) Presentation (11 results) (of which Int'l Joint Research: 8 results)

  • [Journal Article] Co-occurrence Context of the data-driven Quantized Local Ternary Patterns for Visual Recognition2017

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen and Gang Xu
    • Journal Title

      IPSJ Transactions on Computer Vision and Applications

      Volume: 9 Issue: 1 Pages: 1-10

    • DOI

      10.1186/s41074-017-0017-4

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Integration of spatial and orientation contexts in local ternary patterns for HEp-2 cell classification2016

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen and Gang Xu
    • Journal Title

      Pattern Recognition Letters

      Volume: 82-1 Pages: 23-27

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Integration of spatial and orientation contexts in local ternary patterns for HEp-2 cell classification2016

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen, Gang Xu
    • Journal Title

      Pattern Recognition Letters

      Volume: 印刷中 Pages: 23-27

    • DOI

      10.1016/j.patrec.2016.02.004

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Segmentation of liver and spleen based on computational anatomy models2015

    • Author(s)
      Chunhua Dong, Yen-wei Chen, Amir Hossein Foruzan, Lanfen Lin, Xian-hua Han,Tomoko Tateyama, Xing Wu, Gang Xu, Huiyan Jiang
    • Journal Title

      Computers in Biology and Medicine

      Volume: 67 Pages: 146-160

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] High-order Statistics of Weber Local Descriptors for Image Representation2015

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen and Gang Xu
    • Journal Title

      IEEE Transaction on Cybernetics

      Volume: 45-99-6 Pages: 1180-1193

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Non-rigid image registration with anatomical structure constraint for assessing locoregional therapy of hepatocellular carcinoma2015

    • Author(s)
      Chunhua Dong, Yen-Wei Chen, Toshihito Seki, Ryosuke Inoguchi, Chen-Lun Lin and Xian-Hua Han
    • Journal Title

      Computerized Medical Imaging and Graphics

      Volume: 45 Pages: 75-83

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] スパース表現と自己相似性を用いた三次元医用画像の超解像処理2015

    • Author(s)
      岩本裕太郎,韓先花,椎野顕彦,陳延偉
    • Journal Title

      電子情報通信学会論文誌 D

      Volume: J98-D Pages: 1312-1324

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Interactive Segmentation and Visualization System for Medical Images on Mobile Devices2015

    • Author(s)
      Titinunt Kitrungrotsakul, Chunhua Dong, Tomoko Tateyama, Xian-Hua Han, Yen-Wei Chen
    • Journal Title

      J. Adv. Simulat. Sci Eng.

      Volume: 2, No.1 Pages: 96-107

    • NAID

      130005073858

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] High-order Statistics of Micro-Texton for HEp-2 Staining Pattern Classification2014

    • Author(s)
      Xian-Hua Han, Jian Wang, Gang Xu and Yen-Wei Chen
    • Journal Title

      IEEE Transaction on Biomedical Engineering

      Volume: 61 Issue: 8 Pages: 2223-2234

    • DOI

      10.1109/tbme.2014.2320294

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Sparse and Low-Rank Matrix Decomposition for Local Morphological Analysis to Diagnose Cirrhosis2014

    • Author(s)
      JunPing Deng, Xian-Hua Han, Yen-Wei Chen, Gang Xu Yoshinobu Sato, Masatoshi Hori, Noriyuki Tomiyama
    • Journal Title

      IEICE Transactions on Information and Systems

      Volume: E97.D Issue: 12 Pages: 3210-3221

    • DOI

      10.1587/transinf.2014EDP7180

    • NAID

      130004841754

    • ISSN
      0916-8532, 1745-1361
    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] A Robust Registration Method using Huber ICP and Low Rank and Sparse Decomposition2015

    • Author(s)
      Qiaochu Zhao, Xian-Hua Han, Yan-Wei Chen
    • Organizer
      Asia-Pacific Signal and Information Processing Association annual summit and conference (APSIPA ASC2015)
    • Place of Presentation
      Hongkong(China)
    • Year and Date
      2015-12-16
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Automatic Alignment of Deformable Organs in Medical Volume Data2015

    • Author(s)
      Masahiro Isobe, Shota Niga, Kei Ito, Xian-Hua Han, Yen-Wei Chen and Gang Xu
    • Organizer
      The 11th Joint Workshop on Machine Perception and Robotics (MPR2015)
    • Place of Presentation
      JR博多シティ(福岡県福岡市)
    • Year and Date
      2015-11-26
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Co-occurrence Context of the data-driven Quantized Local Ternary Patterns for Visual Recognition2015

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen, Gang Xu
    • Organizer
      The 3rd IAPR Asian Conference on Pattern Recognition (ACPR2015)
    • Place of Presentation
      Kuala Lumpur(Malaysia)
    • Year and Date
      2015-11-06
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Discriminant Statistical Analysis of Local Facial Geometrical Regions2015

    • Author(s)
      Misae Nakatsu, Xian-Hua Han, Ryosuke Kimura and Yen-Wei Chen
    • Organizer
      3rd Asian Conference on Pattern Recognition (ACPR2015)
    • Place of Presentation
      Kuala Lumpur(Malaysia)
    • Year and Date
      2015-11-05
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Nuclear Detection in 4D Microscope Images of Developing Embryo Using Enhanced Probability Map of Top-ranked Intensity-ordered Descriptors2015

    • Author(s)
      Xian-Hua Han, Yukako Tohsato, Koji Kyoda, Shuichi Onami, Ikuko Nishikawa and Yen-Wei Chen
    • Organizer
      3rd Asian Conference on Pattern Recognition (ACPR2015)
    • Place of Presentation
      Kuala Lumpur(Malaysia)
    • Year and Date
      2015-11-05
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] HEp-2 Staining Pattern Recognition Using Stacked Fisher Network for Encoding Weber Local Descriptor2015

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen, and Gang Xu
    • Organizer
      6th International Workshop on Machine Learning in Medical Imaging (MLMI 2015)
    • Place of Presentation
      Munich(German)
    • Year and Date
      2015-10-05
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Liver Segmentation Using Superpixel-Based Graph Cuts and Regions of Shape2015

    • Author(s)
      Titinunt Kitrungrotsakul, Xian-Hua Han, and Yen-Wei Chen
    • Organizer
      IEEE International Conference on Image Processing (ICIP2015)
    • Place of Presentation
      Quebec(Canada)
    • Year and Date
      2015-09-30
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Coccurrence Statistics of Local Ternary Patterns for HEp-2 Cell Classification2015

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen, Gang Xu
    • Organizer
      Innovation in Medicine and Healthcare 2015
    • Place of Presentation
      立命館大学朱雀キャンパス(京都府京都市)
    • Year and Date
      2015-09-11
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Automatic Localization of Deformable Organs in Medical Volume Data by Exhaustive Search2014

    • Author(s)
      Shota Niga, Kei Ito, Masahiro Isobe, Xian-Hua Han, Yen-Wei Chen and Gang Xu
    • Organizer
      The 10th Joint Workshop on Machine Perception and Robotics (MPR2014)
    • Place of Presentation
      Beijing, China
    • Year and Date
      2014-10-17
    • Related Report
      2014 Research-status Report
  • [Presentation] Data-Driven Model of Weber Local Descriptors for Visual Recognition2014

    • Author(s)
      Xian-Hua Han, Yen-Wei Chen, Gang Xu
    • Organizer
      MIRU2014 第17回画像の認識・理解シンポジウム
    • Place of Presentation
      岡山コンベンションセンター(岡山県)
    • Year and Date
      2014-07-31
    • Related Report
      2014 Research-status Report
  • [Presentation] Bayesian-based Saliency Model for Liver Tumor Enhancement2014

    • Author(s)
      Xianhua HAN, Yen-Wei CHEN, Gang XU
    • Organizer
      Smart Digital Futures 2014
    • Place of Presentation
      Chania, Greece
    • Year and Date
      2014-06-18
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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