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Melt-like growth of protein crystals

Research Project

Project/Area Number 26390054
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Crystal engineering
Research InstitutionThe University of Tokushima

Principal Investigator

Suzuki Yoshihisa  徳島大学, 大学院理工学研究部, 准教授 (60325248)

Co-Investigator(Kenkyū-buntansha) 藤原 貴久  徳島大学, 大学院理工学研究部, 教務補佐員 (10648695)
佐藤 正英  金沢大学, 総合メディア基盤センター, 教授 (20306533)
佐崎 元  北海道大学, 低温科学研究所, 教授 (60261509)
勝野 弘康  立命館大学, 理工学部, 助教 (70377927)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords脱塩 / 遠心濃縮 / 結晶構造解析 / 液液相分離 / 融液様成長 / リゾチーム / グリセロール / グルコースイソメラーゼ / 酵素活性 / 分子ステップ
Outline of Final Research Achievements

Salt-free protein crystallization method with centrifugal concentration apparatus has been developed. With this method, nucleation of hen egg-white lysozyme (HEWL) crystals occurs in hyper-concentrated liquid phase obtained by liquid-liquid phase separation during centrifugal concentration processes. We could successfully observed molecular steps on the obtained crystal surface. Three-dimensional structure of lysozyme molecule obtained in this method is significantly different from that obtained by normal salting-out method.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (36 results)

All 2017 2016 2015 2014 Other

All Journal Article (17 results) (of which Peer Reviewed: 17 results,  Open Access: 8 results,  Acknowledgement Compliant: 9 results) Presentation (16 results) (of which Int'l Joint Research: 6 results,  Invited: 3 results) Remarks (3 results)

  • [Journal Article] Two mechanisms forming a comblike step pattern induced by a moving linear adatom source2017

    • Author(s)
      Masahide Sato, Hitoshi Miura, and Makio Uwaha
    • Journal Title

      Physical Review E

      Volume: 95 Issue: 3

    • DOI

      10.1103/physreve.95.032803

    • NAID

      120006226515

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Effect of Direction of an External Force on Crystallization of Colloidal Particles in a V-Groove by Sedimentation2017

    • Author(s)
      Masahide Sato
    • Journal Title

      Japanese Journal of Applied Physics

      Volume: 55 Issue: 9 Pages: 095601-095601

    • DOI

      10.7567/jjap.55.095601

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Adsorption, Desorption, Surface Diffusion, Lattice Defect Formation, and Kink Incorporation Processes of Particles on Growth Interfaces of Colloidal Crystals with Attractive Interactions2016

    • Author(s)
      Yoshihisa Suzuki, Yoshiaki Hattori, Jun Nozawa, Satoshi Uda, Akiko Toyotama and Junpei Yamanaka
    • Journal Title

      Crystals

      Volume: 6 Issue: 7 Pages: 80-80

    • DOI

      10.3390/cryst6070080

    • NAID

      120006941117

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Two-dimensional Crystal Structure Formed by Two Components of DNA Nano- Particles on a Substrate2016

    • Author(s)
      Hiroyasu Katsuno, Yuya Maegawa, and Masahide Sato
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 85 Issue: 7 Pages: 074605-074605

    • DOI

      10.7566/jpsj.85.074605

    • NAID

      210000134011

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] In-situ observation of crystal surfaces by optical miscroscopy2016

    • Author(s)
      Gen Sazaki, Ken Nagashima, Kenichiro Murata, and Yoshinori Furukawa
    • Journal Title

      Progress in Crystal Growth and Characterization of Materials

      Volume: 62 Issue: 2 Pages: 408-412

    • DOI

      10.1016/j.pcrysgrow.2016.04.024

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Two types of quasi-liquid layers on ice crystals are formed kineticcally2016

    • Author(s)
      Harutoshi. Asakawa, Gen. Sazaki, Ken. Nagashima, S. Nakatsubo, Y. Furukawa
    • Journal Title

      Proceedings of the National Academy of Sciences of the United States of America

      Volume: 113 Issue: 7 Pages: 1749-1753

    • DOI

      10.1073/pnas.1521607113

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mechanism of Chirality Conversion by Periodic Change of Temperature: Role of Chiral Clusters2016

    • Author(s)
      H. Katsuno and M. Uwaha
    • Journal Title

      Phys. Rev. E

      Volume: 93 Issue: 1 Pages: 013002-013002

    • DOI

      10.1103/physreve.93.013002

    • NAID

      120005690880

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] First Direct Observation of Impurity Effects on the Growth Rate of Tetragonal Lysozyme Crystals under Microgravity as Measured by Interferometry2015

    • Author(s)
      Yoshihisa Suzuki, Katsuo Tsukamoto, Izumi Yoshizaki, Hitoshi Miura and Takahisa Fujiwara
    • Journal Title

      Crystal Growth & Design

      Volume: 15 Issue: 10 Pages: 4787-4794

    • DOI

      10.1021/acs.cgd.5b00456

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Correction of the equilibrium temperature caused by slight evaporation of water in protein crystal growth cells during long-term space experiments at International Space Station2015

    • Author(s)
      Takahisa Fujiwara, Yoshihisa Suzuki, Izumi Yoshizaki, Katsuo Tsukamoto, Kenta Murayama, Seijiro Fukuyama, Kouhei Hosokawa, Kentaro Oshi, Daisuke Ito, Tomoya Yamazaki, Masaru Tachibana and Hitoshi Miura
    • Journal Title

      Review of Scientific Instruments

      Volume: 86 Issue: 8

    • DOI

      10.1063/1.4928491

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Relation between the Step Pattern and the Velocity of the Moving Linear Adatom Source2015

    • Author(s)
      K. Kishi, M. Kawaguchi, H. Miura, M. Sato, M. Uwaha
    • Journal Title

      e-J. Surf. Sci. Nanotech.

      Volume: 13 Issue: 0 Pages: 269-274

    • DOI

      10.1380/ejssnt.2015.269

    • NAID

      130005074891

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Double spiral steps on Ih ice crystal surfaces grown from water vapor just below the melting point2014

    • Author(s)
      G. Sazaki, H. Asakawa, K. Nagashima, S. Nakatsubo, Y. Furukawa
    • Journal Title

      Crystal Growth & Design

      Volume: 14 Issue: 5 Pages: 2133-2137

    • DOI

      10.1021/cg4014448

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Crystallization of Brownian particles in thin systems constrained by walls2014

    • Author(s)
      Mamoru Fujine, Masahide Sato, Tetsuya Toyooka, Hiroyasu Katsuno, Yoshihisa Suzuki, and Tsutomu Sawada
    • Journal Title

      Physical Review E

      Volume: 90 Issue: 3

    • DOI

      10.1103/physreve.90.032404

    • NAID

      120005516438

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Colloidal crystallization on tilted substrates under gravitational fields2014

    • Author(s)
      Yoshihisa Suzuki, Atsushi Mori, Masahide Sato, Hiroyasu Katsuno and Tsutomu Sawada
    • Journal Title

      Journal of Crystal Growth

      Volume: 401 Pages: 905-909

    • DOI

      10.1016/j.jcrysgro.2013.11.101

    • NAID

      120005411666

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Dislocations in High-quality Glucose Isomerase Crystals Grown from Seed Crystals2014

    • Author(s)
      Koizumi, Haruhiko; Tachibana, Masaru; Yoshizaki, Izumi; Fukuyama, Seijiro; Tsukamoto, Katsuo; Suzuki, Yoshihisa; Uda, Satoshi; Kojima, Kenichi
    • Journal Title

      Crystal Growth & Design

      Volume: 14 Issue: 10 Pages: 5111-5116

    • DOI

      10.1021/cg500731v

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Identification oftriangular-shapeddefectsoftenappeared in hard-spherecrystalsgrownonasquarepatternunder gravitybyMonteCarlosimulations2014

    • Author(s)
      Atsushi Mori and Yoshihisa Suzuki
    • Journal Title

      Physica B

      Volume: 452 Pages: 58-65

    • DOI

      10.1016/j.physb.2014.07.012

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Gravitational Tempering in Colloidal Epitaxy To Reduce Defects Further2014

    • Author(s)
      Atsushi Mori, Yoshihisa Suzuki and Masahide Sato
    • Journal Title

      Crystal Growth & Design

      Volume: 14 Issue: 5 Pages: 2083-2086

    • DOI

      10.1021/cg401884k

    • NAID

      120005463355

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Cluster diffusion on two-dimensional surface with immobile impurities2014

    • Author(s)
      Hiroyasu Katsuno and Masahide Sato
    • Journal Title

      Journal of Crystal Growth

      Volume: 401 Pages: 504-507

    • DOI

      10.1016/j.jcrysgro.2013.10.050

    • NAID

      120005411667

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] グルコースイソメラーゼの沈澱剤フリー結晶化と結晶構造解析2016

    • Author(s)
      鈴木 良尚, 真板 宣夫
    • Organizer
      日本物理学会第71回年次大会
    • Place of Presentation
      東北学院大学(宮城県仙台市)
    • Year and Date
      2016-03-21
    • Related Report
      2015 Research-status Report
  • [Presentation] Protein Crystallization by Slow Evaporation of Precipitant-free Solution in the Presence of Hydrochloric Acid2016

    • Author(s)
      Yoshihisa Suzuki, Takahisa Fujiwara, and Shoko Ueta
    • Organizer
      The 18th International Conference on Crystal Growth and Epitaxy
    • Place of Presentation
      名古屋国際会議場(愛知県・名古屋市)
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Step velocities of glucose isomerase crystals in the presence of hen egg-white lysozyme in solution2016

    • Author(s)
      Takahisa Fujiwara, Daido Nakahashi, Shin-ichiro Yanagiya, and Yoshihisa Suzuki
    • Organizer
      The 18th International Conference on Crystal Growth and Epitaxy
    • Place of Presentation
      名古屋国際会議場(愛知県・名古屋市)
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Relation between the period of protrusions in a comb-like step pattern and the velocity of adatom source moving in front of the step2016

    • Author(s)
      Masahide Sato, and Makio Uwaha
    • Organizer
      The 18th International Conference on Crystal Growth and Epitaxy
    • Place of Presentation
      名古屋国際会議場(愛知県・名古屋市)
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Crystal lattice structure of two components of DNA nano particles on a substrate2016

    • Author(s)
      Yuya Maegawa, Hiroyasu Katsuno, and Masahide Sato
    • Organizer
      The 18th International Conference on Crystal Growth and Epitaxy
    • Place of Presentation
      名古屋国際会議場(愛知県・名古屋市)
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Effect of Direction of External Force on Crystallization of Colloidal Particles in a V-Groove in Sedimentation2016

    • Author(s)
      Masahide Sato
    • Organizer
      The 18th International Conference on Crystal Growth and Epitaxy
    • Place of Presentation
      名古屋国際会議場(愛知県・名古屋市)
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] In Situ Observation of Ice Crystal Surfaces by Advanced Optical Microscopy2016

    • Author(s)
      Gen Sazaki, Harutoshi Asakawa, Ken-ichiro Murata, Ken Nagashima, Shunichi Nakatsubo, and Yoshinori Furukawa
    • Organizer
      The 18th International Conference on Crystal Growth and Epitaxy
    • Place of Presentation
      名古屋国際会議場(愛知県・名古屋市)
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 異種タンパク質存在下で結晶化させたグルコースイソメラーゼ結晶の成長速度2015

    • Author(s)
      藤原 貴久, 鈴木 良尚, 佐藤 正英, 佐崎 元, 勝野 弘康
    • Organizer
      第45回結晶成長国内会議
    • Place of Presentation
      北海道大学(北海道札幌市)
    • Year and Date
      2015-10-20
    • Related Report
      2015 Research-status Report
  • [Presentation] 遠心濃縮によるグルコースイソメラーゼの結晶化2015

    • Author(s)
      鈴木良尚
    • Organizer
      第45回結晶成長国内会議
    • Place of Presentation
      北海道大学(北海道札幌市)
    • Year and Date
      2015-10-19
    • Related Report
      2015 Research-status Report
  • [Presentation] Recent Advances on the Ground-Based Experiments of Protein Crystallization after the NanoStep Project2015

    • Author(s)
      Yoshihisa Suzuki, Katsuo Tsukamoto, Takahisa Fujiwara, Tomohiro Shiomoto, Daido Nakahashi, Izumi Yoshizaki, Seijiro Fukuyama, Masaru Tachibana, Haruhiko Koizumi, Shin-ichiro Yanagiya, Yasutomo Arai and Makoto Natuisaka
    • Organizer
      The Joint Conference of 6th International Symposium on Phshycs in Space & 10th Inerntional Conference on Two-Phase System for Space and Ground Applications
    • Place of Presentation
      同志社大学(京都府京都市)
    • Year and Date
      2015-09-18
    • Related Report
      2015 Research-status Report
  • [Presentation] 温度サイクルによるカイラル結晶のカイラリティ転換機構2015

    • Author(s)
      勝野弘康, 上羽牧夫
    • Organizer
      日本物理学会第70回年次大会
    • Place of Presentation
      早稲田大学(東京都新宿区)
    • Year and Date
      2015-03-21 – 2015-03-24
    • Related Report
      2014 Research-status Report
  • [Presentation] In situ observation of surface melting processes of ice crystals by advanced optical microscopy2015

    • Author(s)
      G. Sazaki, H. Asakawa, K. Murata, K. Nagashima, S. Nakatsubo, Y. Furukawa
    • Organizer
      International Symposium on Semiconductor Materials and Devices
    • Place of Presentation
      Anna University (India)
    • Year and Date
      2015-02-02 – 2015-02-05
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 06PS10 ブラウン動力学法を用いた容器形状と外力による結晶構造制御2014

    • Author(s)
      藤根守,佐藤正英、勝野弘康,鈴木良尚
    • Organizer
      第44回日本結晶成長国内会議
    • Place of Presentation
      学習院大学(東京都豊島区)
    • Year and Date
      2014-11-06 – 2014-11-08
    • Related Report
      2014 Research-status Report
  • [Presentation] 異種タンパク質存在下で結晶化させたタンパク質結晶2014

    • Author(s)
      藤原貴久, 鈴木良尚, 佐藤正英, 佐崎元, 勝野弘康, 柳谷伸一郎, 加藤有介
    • Organizer
      第44回日本結晶成長国内会議
    • Place of Presentation
      学習院大学(東京都豊島区)
    • Year and Date
      2014-11-06 – 2014-11-08
    • Related Report
      2014 Research-status Report
  • [Presentation] 環境相の変化に伴うリゾチーム結晶の界面モルフォロジーの変化2014

    • Author(s)
      190.鈴木良尚, 栁谷伸一郎, 塚本勝男, 吉崎泉, 橘勝, 藤原貴久, 加藤有介
    • Organizer
      第44回日本結晶成長国内会議
    • Place of Presentation
      学習院大学(東京都豊島区)
    • Year and Date
      2014-11-06 – 2014-11-08
    • Related Report
      2014 Research-status Report
  • [Presentation] High pressure crystallization and crystallography of glucose isomerase2014

    • Author(s)
      Yoshihisa Suzuki, Masayuki Tsukamoto, Takahisa Fujiwara and Yuta Uehara
    • Organizer
      23rd Congress and General Assembly of the International Union of Crystallography (IUCr2014)
    • Place of Presentation
      Palais des congres de Montreal (Canada)
    • Year and Date
      2014-08-05 – 2014-08-12
    • Related Report
      2014 Research-status Report
    • Invited
  • [Remarks] 徳島大学教育研究者総覧

    • URL

      http://pub2.db.tokushima-u.ac.jp/ERD/person/10688/work-ja.html

    • Related Report
      2015 Research-status Report
  • [Remarks] 結晶成長基礎研究会(成果報告会)

    • URL

      http://www.chem.tokushima-u.ac.jp/B2/TamuraLab/H27KAKENmeeting_program01.htm

    • Related Report
      2014 Research-status Report
  • [Remarks] 徳島大学教育研究者総覧(鈴木良尚)

    • URL

      http://pub2.db.tokushima-u.ac.jp/ERD/person/10688/work-ja.html

    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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