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Engineering of type III polyketide synthase by deletion and addition of residues

Research Project

Project/Area Number 26560435
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biomolecular chemistry
Research InstitutionUniversity of Toyama

Principal Investigator

MORITA HIROYUKI  富山大学, 和漢医薬学総合研究所, 教授 (20416663)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords酵素工学 / ポリケタイド合成酵素 / X線結晶構造解析 / 立体構造解析
Outline of Final Research Achievements

In order to modify the function of type III polyketide synthase, we carried out deletion mutagenesis studies on octaketide synthase (OKS), which catalyzes sequential condensations of eight molecules of malonyl-CoA to produce SEK4/SEK4b. The deletion mutagenesis studies revealed that the loss of Varine351, lining the active site cavity of OKS, results in specializing its starter substrate specificity in fatty acyl CoAs. Furthermore, a crystal structure analysis of the mutant enzyme suggested that an expansion of the active-site cavity near catalytic residue, cysteine, specialized the substrate specificity of the mutant in the fatty acyl CoAs.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (18 results)

All 2016 2015 2014 Other

All Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 5 results,  Open Access: 2 results,  Acknowledgement Compliant: 4 results) Presentation (12 results) (of which Int'l Joint Research: 6 results,  Invited: 4 results) Remarks (1 results)

  • [Journal Article] Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases2016

    • Author(s)
      T. Mori, L. Zhang, T. Awakawa, S. Hoshino, M. Okada, H. Morita, I. Abe
    • Journal Title

      Nature Communications

      Volume: 7 Issue: 1 Pages: 10849-10851

    • DOI

      10.1038/ncomms10849

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa2016

    • Author(s)
      X. Yang, T. Matsui, T. Kodama, T. Mori, X. Zhou, F. Taura, H. Noguchi, I. Abe, H. Morita
    • Journal Title

      FEBS J

      Volume: 283 Issue: 6 Pages: 1088-1106

    • DOI

      10.1111/febs.13654

    • NAID

      120006559813

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Structural basis for the formation of acylalkylpyrones from two β-ketoacyl units by the fungal type III polyketide synthase CsyB2015

    • Author(s)
      Mori, T., Yang, D., Matsui, T, Hashimoto, M., Morita, H., Fujii, I., Abe, I.
    • Journal Title

      J. Biol. Chem.

      Volume: 290 Issue: 8 Pages: 5214-5225

    • DOI

      10.1074/jbc.m114.626416

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Expression, purification, and crystallization of a plant polyketide cyclase from Cannabis sativa2015

    • Author(s)
      X. Yang, T. Matsui, T. Mori, F. Taura, H. Noguchi, I. Abe, H. Morita
    • Journal Title

      Acta Crystallographica Section F

      Volume: 71 Issue: 12 Pages: 1470-1474

    • DOI

      10.1107/s2053230x15020385

    • NAID

      120006389597

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] 植物由来Ⅲ型ポリケタイド合成酵素の触媒機能の拡張2014

    • Author(s)
      森田洋行
    • Journal Title

      日本応用酵素協会誌

      Volume: 49 Pages: 1-8

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] アサ由来ポリケタイド閉環酵素のX線結晶構造解析2016

    • Author(s)
      森田洋行,楊新美,松井崇,児玉猛,森貴裕,周暁希,野口博司,阿部郁朗
    • Organizer
      日本薬学会第136年会
    • Place of Presentation
      横浜
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] Crystal structure analysis of the novel plant polyketide cyclase2016

    • Author(s)
      Morita H
    • Organizer
      International Conference on Natural Products (ICNP) 2016
    • Place of Presentation
      Kuala Terengganu, Malaysia
    • Year and Date
      2016-03-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] アサ由来ポリケタイド閉環酵素のX線結晶構造解析2016

    • Author(s)
      松井崇,楊新美,児玉猛,周暁希,森貴裕,野口博司,阿部郁朗,森田洋行
    • Organizer
      2015年度量子ビームサイエンスフェスタ
    • Place of Presentation
      つくば
    • Year and Date
      2016-03-15
    • Related Report
      2015 Annual Research Report
  • [Presentation] Structural basis for novel plant polyketide cyclase2016

    • Author(s)
      Morita H
    • Organizer
      32nd International Annual Meeting in Pharmaceutical Sciences
    • Place of Presentation
      Chulalongkorn, Thailand
    • Year and Date
      2016-03-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Structure-function analyses of two novel plant type III polyketide synthases obtained from medicinal plant Evodia rutaecarpa2015

    • Author(s)
      Kodama T., Matsui T., Mori T., Tadakoshi T., Noguchi H., Abe I., Morita H
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Precursor-directed biosynthesis of unnatural novel alkaloids by using a plant type III polyketide synthase obtained from Evodia rutaecarpa2015

    • Author(s)
      Ito T., Kodama T., Noguchi H., Abe I., Morita H
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Characterization of two novel plant type III polykeitde synthases obtained from medicinal plant Evodia rutaecarpa2015

    • Author(s)
      Morita H
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] アサ由来ポリケタイド閉環酵素のX線結晶構造解析2015

    • Author(s)
      森田洋行,楊新美,松井崇,児玉猛,周暁希,森貴裕,野口博司,阿部郁朗
    • Organizer
      酵素工学研究会第74回講演会
    • Place of Presentation
      東京
    • Year and Date
      2015-10-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] Structural basis of polyketide cyclase from Cannabis sativa2015

    • Author(s)
      Yang X., Matsui T., Kodama T., Abe I., Morita H.: Structural basis of polyketide cyclase from Cannabis sativa
    • Organizer
      ISPSA2015
    • Place of Presentation
      Tokushima
    • Year and Date
      2015-08-30
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 植物ポリケタイド骨格形成酵素群を利用した非天然型化合物群の創出2015

    • Author(s)
      森田洋行
    • Organizer
      理研NMR天然物シンポジウム
    • Place of Presentation
      横浜
    • Year and Date
      2015-08-21
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 植物ポリケタイド合成酵素へのアミノ酸欠損/導入変異による多環性化合物群の創出2014

    • Author(s)
      森田洋行
    • Organizer
      とやま産学官金交流会2014
    • Place of Presentation
      富山
    • Year and Date
      2014-12-02
    • Related Report
      2014 Research-status Report
  • [Presentation] 植物ポリケタイド合成酵素へのアミノ酸欠損/導入変異による多環性化合物群の創出2014

    • Author(s)
      森田洋行
    • Organizer
      富山大学コラボフェスタ2014
    • Place of Presentation
      富山
    • Year and Date
      2014-09-19
    • Related Report
      2014 Research-status Report
  • [Remarks] 富山大学和漢医薬学総合研究所 天然物化学分野

    • URL

      http://www.inm.u-toyama.ac.jp/napc/index.html

    • Related Report
      2015 Annual Research Report

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Published: 2014-04-04   Modified: 2017-05-10  

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