• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

A trial to isolate novel pathogenic viruses

Research Project

Project/Area Number 26670223
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Virology
Research InstitutionKanazawa University

Principal Investigator

Muramatsu Masamichi  金沢大学, 医学系, 教授 (20359813)

Co-Investigator(Renkei-kenkyūsha) WAKAE Kosho  金沢大学, 医学系, 助教 (70638303)
KONDO Satoru  金沢大学, 付属病院, 助教 (70436822)
FUJIWARA Hiroshi  金沢大学, 医学系, 教授 (30252456)
Research Collaborator YOSHIZAKI Tomokazu  金沢大学, 医学系, 教授 (70262582)
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2014: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
KeywordsCircular DNA / virus / Polyomavirus / 環状DNA / 常在ウイルス / ローリングサイクル / DNAウイルス / ウイルス / 発癌 / ポリオーマウイルス / 環状DNAゲノム / 日和見感染
Outline of Final Research Achievements

Recently, many novel polyomaviruses have been identified as a candidate pathogenic virus that is responsible for particular diseases in immune compromised patients. This study has tried to isolate novel viruses responsible for a disease by rolling cycle amplification which can strongly amplify viral circular genomic DNA. Using test samples, we set up a condition where we can amplify a very small amount of circular DNA from total DNA sample. Then, we tested series of healthy- and disease- derived samples to amplify circular DNA. Most of amplified DNA are either artifacts or mitochondrial DNA. Skin samples provide amplification of MCV polyomavirus, that is consistent with previous published reports. However, we do not find a novel polyomavirus. Origin unknown circular DNA are also found, which is a clear outcome of this study, in spit of few information of pathogenicity.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (10 results)

All 2015 2014 Other

All Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 3 results,  Acknowledgement Compliant: 1 results) Presentation (4 results) (of which Int'l Joint Research: 2 results,  Invited: 2 results) Remarks (3 results)

  • [Journal Article] Hypermutation in the E2 gene of human papillomavirus type 16 in cervical intraepithelial neoplasia.2015

    • Author(s)
      Kukimoto I, Mori S, Aoyama S, Wakae K, Muramatsu M, Kondo K.
    • Journal Title

      Journal of Medical Virology

      Volume: 87 Issue: 10 Pages: 1754-1760

    • DOI

      10.1002/jmv.24215

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Detection of hypermutated human papillomavirus type 16 genome by Next-Generation Sequencing.2015

    • Author(s)
      Wakae K, Aoyama S, Wang Z, Kitamura K, Liu G, Monjurul AM, Koura M, Imayasu M, Sakamoto N, Nakamura M, Kyo S, Kondo S, Fujiwara H, Yoshizaki T, Kukimoto I, Yamaguchi K, Shigenobu S, Nishiyama T, Muramatsu M.
    • Journal Title

      Virology.

      Volume: 485 Pages: 460-466

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Hypermutation in the E2 Gene of Human Papillomavirus Type 16 in Cervical Intraepithelial Neoplasia2015

    • Author(s)
      Iwao kukimoto, Seiichiro Mori, Satoru Aoyama, Kosho Wakae, Masamichi Muramatsu, Kazunari Kondo
    • Journal Title

      Journal of Medical Virology

      Volume: 印刷中

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] APOBECs: antiviral or oncogenic ?(口頭発表)2015

    • Author(s)
      村松正道
    • Organizer
      Dalian Cancer Symposium from basic research to clinical application
    • Place of Presentation
      大連大学(大連市、中国)
    • Year and Date
      2015-09-23
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 『APOBECとウイルス感染』2015

    • Author(s)
      村松正道
    • Organizer
      ウイルス研セミナー「ウイルス研究の潮流」(共同利用・共同研究拠点事業)
    • Place of Presentation
      京都大学ウイルス研究所本館1階セミナー
    • Year and Date
      2015-09-02
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 『Next Generation Sequencing detects APOBEC3 mediated Hypermutation in Human Papillomavirus Type 16 Genome in vivo』2015

    • Author(s)
      Kosho Wakae (1), Mitsuhiro Nakamura (2), Satoru Kondo (3), Hiroshi Fujiwara (2), Tomokazu Yoshizaki (3), Iwao Kukimoto (4), Tomoaki Nishiyama (5), and Masamichi Muramatsu : 口頭発表
    • Organizer
      2015 DNA tumor virus Meeting,International Centre for Genetic Engineering and Biotechnology(ICGEB), An IUBMB symposium (国際学会)
    • Place of Presentation
      イタリア  Congress Centre of the Stazione Marittima
    • Year and Date
      2015-07-24
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] APOBECデアミナーゼの新規抗ウイルス活性2014

    • Author(s)
      村松 正道
    • Organizer
      北陸腸内細菌研究会 総会・研究発表会
    • Place of Presentation
      ホテル日航金沢(石川・金沢)
    • Year and Date
      2014-07-19
    • Related Report
      2014 Research-status Report
  • [Remarks] 研究室HP

    • URL

      http://molgenet.w3.kanazawa-u.ac.jp/index.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] 研究室のHP

    • URL

      http://molgenet.w3.kanazawa-u.ac.jp/

    • Related Report
      2014 Research-status Report
  • [Remarks] 大学のHP内にある研究室の紹介

    • URL

      http://www.m.kanazawa-u.ac.jp/outline/gaiyou/dep01/dep1-04.html

    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2017-05-10  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi