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Assessment of micro residual disease with ultra deep sequencing

Research Project

Project/Area Number 26670492
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Pediatrics
Research InstitutionNational Center for Child Health and Development (2015)
The University of Tokyo (2014)

Principal Investigator

Kato Motohiro  国立研究開発法人国立成育医療研究センター, その他部局等, その他 (40708690)

Co-Investigator(Renkei-kenkyūsha) Takita Junko  東京大学, 小児科, 准教授 (00359621)
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords白血病 / バイオマーカー / 癌 / 小児白血病
Outline of Final Research Achievements

To improve “stratification strategy based on prognostic factors”, we planned to establish detection system of micro residual disease (miRD) with higher sensitivity compared to standard methods. First, we assessed sensitivity using virtual tumor specimen with serial dilution by next generation sequencer, and 10-3 to 10-4 of miRD could be detected. Using this method, by obtaining miRD status, we could illustrate dynamic evolutionary process of a case with unique coincidence of ALL and LCH. Furthermore, we performed miRD detection using droplet digital PCR technology, and its sensitivity and quantitativity.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (1 results)

All 2015

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results)

  • [Journal Article] Genomic analysis of clonal origin of Langerhans cell histiocytosis following acute lymphoblastic leukemia2015

    • Author(s)
      2.Kato M, Seki M, Yoshida K, Sato Y, Oyama R, Arakawa Y, Kishimoto H, Taki T, Akiyama M, Shiraishi Y, Chiba K, Tanaka H, Mitsuiki N, Kajiwara M, Mizutani S, Sanada M, Miyano S, Ogawa S, Koh K, Takita J.
    • Journal Title

      British Journal of Haematology

      Volume: Nov 5 Issue: 1 Pages: 169-172

    • DOI

      10.1111/bjh.13841

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant

URL: 

Published: 2014-04-04   Modified: 2017-05-10  

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