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Biochemical analysis of a DNA crosslink repair protein, FAN1

Research Project

Project/Area Number 26830128
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Genome biology
Research InstitutionWaseda University

Principal Investigator

SATO Koichi  早稲田大学, 理工学術院, 次席研究員(研究院助教) (60708585)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2014: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsゲノム維持修復 / Fanconi anemia / DNA crosslink / FAN1 / FANCD2 / FANCI / RAD51 / RPA / DNA鎖間架橋 (ICL) / Nuclease
Outline of Final Research Achievements

DNA interstrand crosslink (ICL) prevents the progression of DNA replication and transcription by covalent crosslinking between complementary strands of double-stranded DNA. ICL repair is essential for suppression of chromosomal aberrations that contribute to cell death and tumorigenesis. Dual-incision around the crosslinked bases (ICL unhook) is a central step in the ICL repair. FAN1 is a structure-specific endonuclease that is considered to be involved in the ICL unhook. However, the mechanism how FAN1 recognizes the damaged bases and mediates the ICL unhook has remained elusive. In this study, our biochemical analyses with the purified FAN1 protein revealed the mechanism of the substrate-recognition and -incision by FAN1. In addition, we found that the FANCI-FANCD2 complex that recruits FAN1 to ICL sites functions to regulate the nuclease activity of FAN1.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (11 results)

All 2016 2015 2014

All Journal Article (7 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 7 results,  Open Access: 6 results,  Acknowledgement Compliant: 2 results) Presentation (4 results)

  • [Journal Article] Structure and function of human histone H3.Y nucleosome2016

    • Author(s)
      Kujirai T, Horikoshi N, Sato K, Maehara K, Machida S, Osakabe A, Kimura H, Ohkawa Y, Kurumizaka H
    • Journal Title

      Nucleic Acids Research

      Volume: in press

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Histone H3.5 forms an unstable nucleosome and accumulates around transcription start sites in human testis.2016

    • Author(s)
      Urahama T, Harada A, Maehara K, Horikoshi N, Sato K, Sato Y, Shiraishi K, Sugino N, Osakabe A, Tachiwana H, Kagawa W, Kimura H, Ohkawa Y, Kurumizaka H.
    • Journal Title

      Epigenetics Chromatin

      Volume: 9 Issue: 1 Pages: 1-16

    • DOI

      10.1186/s13072-016-0051-y

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mutations in the gene encoding the E2 conjugating enzyme UBE2T cause Fanconi anemia.2015

    • Author(s)
      Hira A, Yoshida K, Sato K, Okuno Y, Shiraishi Y, Chiba K, Tanaka H, Miyano S, Shimamoto A, Tahara H, Ito E, Kojima S, Kurumizaka H, Ogawa S, Takata M, Yabe H, Yabe M.
    • Journal Title

      Am J Hum Genet.

      Volume: 96(6) Issue: 6 Pages: 1001-7

    • DOI

      10.1016/j.ajhg.2015.04.022

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Human FAN1 promotes strand incision in 5´ flapped DNA complexed with RPA2015

    • Author(s)
      Daisuke Takahashi, Koichi Sato, Emiko Hirayama, Minoru Takata, Hitoshi Kurumizaka
    • Journal Title

      The Journal of Biochemistry

      Volume: in press

    • NAID

      40020593603

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] FANCD2 Binds CtIP and Regulates DNA-End Resection during DNA Interstrand Crosslink Repair.2014

    • Author(s)
      Unno J
    • Journal Title

      Cell Rep.

      Volume: 7 Issue: 4 Pages: 1039-1047

    • DOI

      10.1016/j.celrep.2014.04.005

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Expression and purification of human FANCI and FANCD2 using Escherichia coli cells.2014

    • Author(s)
      Daisuke Takahashi, Koichi Sato, Mayo Shimomuki, Minoru Takata, Hitoshi Kurumizaka
    • Journal Title

      Protein Expression and Purification

      Volume: 103 Pages: 8-15

    • DOI

      10.1016/j.pep.2014.08.012

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Defective FANCI Binding by a Fanconi Anemia-Related FANCD2 Mutant.2014

    • Author(s)
      Sato K, Ishiai M, Takata M, Kurumizaka H.
    • Journal Title

      PLoS One

      Volume: 9 Issue: 12 Pages: e114752-e114752

    • DOI

      10.1371/journal.pone.0114752

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 相同組換え修復に重要なFANCI-FANCD2複合体の生化学的機能解析2015

    • Author(s)
      佐藤浩一、下向真代、胡桃坂仁志
    • Organizer
      第23回 DNA複製・組換え・修復ワークショップ
    • Place of Presentation
      静岡県焼津
    • Year and Date
      2015-10-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] Biochemical analysis of DNA crosslink repair proteins, FANCI-FANCD2 complex in homologous recombination2015

    • Author(s)
      佐藤浩一、下向真代、胡桃坂仁志
    • Organizer
      International Symposium on Chromatin Structure, Dynamics, and Function
    • Place of Presentation
      兵庫県淡路島
    • Year and Date
      2015-08-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] Fanconi貧血患者にみられるFANCD2変異体の機能解析2014

    • Author(s)
      佐藤浩一、石合正道、高田穣、胡桃坂仁志
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Research-status Report
  • [Presentation] ファンコニ貧血タンパク質に相互作用するFAN1ヌクレアーゼの機能解析2014

    • Author(s)
      佐藤浩一、髙橋大介、平山恵美子、高田穣、胡桃坂仁志
    • Organizer
      第 2 回若手の会「クロマチン動構造 若手交流ワークショップ」
    • Place of Presentation
      サホロリゾート
    • Year and Date
      2014-07-02 – 2014-07-03
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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