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Regulation of heme oxygenase-2 activity elucidated by the analysis of structural dynamics

Research Project

Project/Area Number 26840040
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Functional biochemistry
Research InstitutionYokohama City University (2015-2016)
Suntory Foundation for Life Sciences (2014)

Principal Investigator

Furukawa Ayako  横浜市立大学, 生命医科学研究科, 特任助教 (90453050)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords動的構造解析 / 酵素 / タンパク質の動的構造解析 / 酵素の調節機構 / 蛋白質の動的構造解析
Outline of Final Research Achievements

Heme oxygenase-2 (HO-2) is composed of a structured region including the heme-binding site and a C-terminal disordered region.However, the C-terminal region's role in the activity is elusive and is difficult to explain by the crystal structure alone because it is disordered. We hypothesized that the C-terminal region transiently interacts with the structured region to regulate the structural dynamics responsible for the activity. To test this hypothesis, we have examined the enzyme activity and structural dynamics of two HO-2 constructs with (long HO-2) and without (short HO-2) the C-terminal region. Enzyme activity assay showed that long HO-2 had 1.5 times higher activity than short HO-2. To explain the difference in the enzyme activity, we performed PRE, R2 dispersion, and CLEANEX-PM experiments. The results of these experiments suggest that the change of the fluctuating mode by the interaction with the C-terminal disordered region regulates the HO-2 activity.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (4 results)

All 2016 2014

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (2 results) (of which Invited: 1 results)

  • [Journal Article] Quantitative analysis of protein–ligand interactions by NMR2016

    • Author(s)
      Furukawa A., Konuma T., Yanaka S., Sugase K.,
    • Journal Title

      Progress in Nuclear Magnetic Resonance Spectroscopy

      Volume: 96 Pages: 47-57

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Quantitative analysis of location- and sequence-dependent deamination by APOBEC3G using real-time NMR spectroscopy2014

    • Author(s)
      Furukawa, A., Sugase, K., Morishita, R., Nagata, T., Kodaki, T., Takaori-Kondo, A., Ryo, A., Katahira, M.
    • Journal Title

      Angew. Chem. Int. Ed. Engl.

      Volume: 53 Issue: 9 Pages: 2349-2352

    • DOI

      10.1002/anie.201309940

    • NAID

      120005647511

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Heme oxygenase-2 activity regulated by the C-terminal intrinsically disordered2014

    • Author(s)
      Sugase K.
    • Organizer
      The 11th Japan-Korea Bilateral Symposium on Biological NMR
    • Place of Presentation
      大阪大学 蛋白研
    • Year and Date
      2014-12-19
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Regulation of heme oxygenase-2 activity elucidated by the analysis of structural dynamics2014

    • Author(s)
      Furukawa A.,, Yamamoto T., Matsuki Y., Suematsu M., Sugase K.
    • Organizer
      International Conference on Magnetic Resonance in Biological Systems
    • Place of Presentation
      Dallas, USA
    • Year and Date
      2014-08-24 – 2014-08-29
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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