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Visualization of plant cell wall lignification via metabolic labelling using novel synthetic monolignol mimics.

Research Project

Project/Area Number 26892014
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Wood science
Research InstitutionKyoto University

Principal Investigator

Tobimatsu Yuki  京都大学, 生存圏研究所, 准教授 (20734221)

Research Collaborator TAKANO Toshiyuki  京都大学, 農学研究科, 教授 (50335303)
Kamitakahara Hiroshi  京都大学, 農学研究科, 准教授 (10293911)
John Ralph  University of Wisconsin, Department of Biochemistry, 教授
Project Period (FY) 2014-08-29 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsリグニン / 植物細胞壁 / バイオマス / 生体イメージング / 蛍光プローブ / クリックケミストリー / 蛍光イメージング / モノリグノール
Outline of Final Research Achievements

Bioorthogonal click chemistry was commissioned to visualize the plant cell wall lignification process in vivo. This approach uses synthetic monolignol mimics tagged with chemical reporters (azide and alkyne groups) that can be metabolically incorporated into lignins in live plants, and subsequently derivatized via in vivo click reactions. We developed a synthetic strategy for producing γ-azide or γ-alkyne-tagged monolignol probes. Furthermore, we explored the utility of the chemical reporter-tagged monolignols to visualize cell wall lignification process in Arabidopsis. Overall, we anticipate that the developed monolignol probes and the methods using them will find broad applications in plant cell wall research.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • Research Products

    (11 results)

All 2016 2015 Other

All Int'l Joint Research (1 results) Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (8 results) (of which Invited: 3 results) Remarks (1 results)

  • [Int'l Joint Research] University of Wisconsin/Great Lakes Bioenergy Research Center(米国)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] A click chemistry strategy for visualization of plant cell wall lignification2015

    • Author(s)
      Tobimatsu, Yuki, Dorien Van de Wouwer, Eric Allen, Robert Kumpf, Bartel Vanholme, Wout Boerjan, John Ralph
    • Journal Title

      Chemical Communications

      Volume: 50 Issue: 82 Pages: 12262-12265

    • DOI

      10.1039/c4cc04692g

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Presentation] リグニンの分子構造・形成メカニズムと制御2016

    • Author(s)
      飛松裕基
    • Organizer
      第66回日本木材学会大会
    • Place of Presentation
      名古屋
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] リグニン形成のフレキシビリティとそれを活用したバイオマス利用2015

    • Author(s)
      飛松裕基
    • Organizer
      2015年度バイオマス変換研究会秋季講演会/第60回リグニン討論会若手の会
    • Place of Presentation
      つくば
    • Year and Date
      2015-11-06
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 合成モノリグノールプローブを活用した細胞壁リグニンの蛍光生体標識2015

    • Author(s)
      有賀哲、飛松裕基、鈴木史朗、Eric Allen、John Ralph、上高原浩、梅澤俊明、高野俊幸
    • Organizer
      第60回リグニン討論会
    • Place of Presentation
      つくば
    • Year and Date
      2015-11-05
    • Related Report
      2015 Annual Research Report
  • [Presentation] リグニン分子構造の多様性とフレキシビリティ2015

    • Author(s)
      飛松裕基
    • Organizer
      新学術領域若手ワークショップ/第9回細胞壁ネットワ ーク定例研究会
    • Place of Presentation
      大阪
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] リグニン前駆体合成酵素遺伝子群の発現制御による植物細胞壁の構造改変2015

    • Author(s)
      飛松裕基
    • Organizer
      食品酵素化学研究会第15回学術講演会
    • Place of Presentation
      京都
    • Year and Date
      2015-09-12
    • Related Report
      2015 Annual Research Report
  • [Presentation] 生体直交型反応を活用したリグニンのメタボリックラベルと蛍光標識2015

    • Author(s)
      飛松 裕基, Dorien Van de Wouwer, 有賀 哲, Eric Allen, Robert Kumpf, Bartel Vanholme, 上高原 浩, 高野 俊幸, Wout Boerjan, John Ralph
    • Organizer
      第59回リグニン討論会
    • Place of Presentation
      福井工業大学
    • Year and Date
      2015-09-11 – 2015-09-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] リグニンの生体標識を指向したモノリグノールプローブ群の合成2015

    • Author(s)
      有賀 哲, 飛松 裕基, Eric Allen John Ralph, 上高原 浩,高野 俊幸
    • Organizer
      第65回日本木材学会
    • Place of Presentation
      タワーホール船堀
    • Year and Date
      2015-03-16 – 2015-03-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] Visualization of cell wall lignins by metabolic labeling and bioorthogonal click chemistry2015

    • Author(s)
      Yuki Tobimatsu, Satoshi Aruga, Dorien Van de Wouwer, Allen Eric, Robert Kumpf, Hiroshi Kamitakahara, Toshiyuki Takano, Bartel Vanholme, Boerjan Wout and John Ralph
    • Organizer
      International Symposium on Wood Science and Technology 2015 (IAWPS2015)
    • Place of Presentation
      Tower Hall Funabori, Tokyo
    • Year and Date
      2015-03-15 – 2015-03-17
    • Related Report
      2014 Annual Research Report
  • [Remarks] 京都大学生存圏研究所 森林代謝機能化学分野ホームページ

    • URL

      http://www.rish.kyoto-u.ac.jp/lmsfpm/index.html

    • Related Report
      2015 Annual Research Report

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Published: 2014-09-09   Modified: 2022-02-02  

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