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Single-cell analysis for the identification of metastatic breast cancer cells

研究課題

研究課題/領域番号 19K16761
研究種目

若手研究

配分区分基金
審査区分 小区分50010:腫瘍生物学関連
研究機関東京医科大学

研究代表者

PrietoVila Marta  東京医科大学, 医学部, 助教(特任) (40804646)

研究期間 (年度) 2019-04-01 – 2020-03-31
研究課題ステータス 中途終了 (2019年度)
配分額 *注記
4,160千円 (直接経費: 3,200千円、間接経費: 960千円)
2020年度: 1,170千円 (直接経費: 900千円、間接経費: 270千円)
2019年度: 2,990千円 (直接経費: 2,300千円、間接経費: 690千円)
キーワードsingle-cell / drug resistance / breast cnacer / single cell / transcriptome / single-cell sequencing / metastasis / breast cancer
研究開始時の研究の概要

In this study, we will use single-cell techniques with the objective to identify cells with metastatic ability within breast cancer primary tumors. First, using scRNA-seq we will characterize the metastatic nodes, to later, search for similar cells within the paired primary tumor. Moreover, we will analyze the possible presence of CTC in blood and their relation with the primary and metastatic tumors. Knowing the genes responsible for CSC phenotype and their role, will be the first step to develop a novel targeted-therapy to eventually increase the surveillance of cancer patients.

研究実績の概要

During the obtainment of Young Scientist JSPS KAKENHI Grant we mainly focused on two topics.
The first one was in continuation to our previous studies on RNA single-cell qPCR, in which we found that the transcription factor Lef1 regulated a conjunct of genes responsible for drug resistance, paper published in the journal Cancer research. During this period of one year, we studied the application of the small molecule Quercetin to inhibit Lef1 and restore the sensitivity to docetaxel of Luminal A subtype of drug resistant breast cancer cells. These studies were presented in November in an International Conference, in New York, USA and will be presented this October, in the 79th Japanese Cancer Association. Moreover, the paper in which Quercetin properties were analyzed is summarized has been published this June in the journal Molecules.
In relation with single-cell analysis procedures and protocols, a protocol-paper was published in the journal Bioprotcol.
Finally, we started the main project regarding RNA single-cell sequencing. We stablished the protocol for single-cell dissociation and sequencing with patient-derived tumor samples on the 10X Genomics system. Overall, we started the collection of those samples and initiated with single-cell analysis and sequencing. This project was planned to be carried for 2-3 years. However, after one year of the acceptance of KANKENHI grant, the main researcher was granted with JSPS fellowship, which unable the reception of other grants including this one. We will continuous this project under the concession of JSPS fellowship.

報告書

(1件)
  • 2019 実績報告書
  • 研究成果

    (5件)

すべて 2020 2019

すべて 雑誌論文 (3件) (うち国際共著 3件、 査読あり 3件) 学会発表 (2件) (うち国際学会 2件)

  • [雑誌論文] Single-cell qPCR Assay with Massively Parallel Microfluidic System2020

    • 著者名/発表者名
      Prieto-Vila Marta、Ochiya Takahiro、Yamamoto Yusuke
    • 雑誌名

      BIO-PROTOCOL

      巻: 10 号: 6 ページ: 1-15

    • DOI

      10.21769/bioprotoc.3563

    • 関連する報告書
      2019 実績報告書
    • 査読あり / 国際共著
  • [雑誌論文] Quercetin Inhibits Lef1 and Resensitizes Docetaxel-Resistant Breast Cancer Cells2020

    • 著者名/発表者名
      Marta Prieto-Vila, Iwao Shimomura, Akiko Kogure, Wataru Usuba, Ryou-u Takahashi, Takahiro Ochiya and Yusuke Yamamoto
    • 雑誌名

      Molecules

      巻: 25 号: 11 ページ: 1-11

    • DOI

      10.3390/molecules25112576

    • 関連する報告書
      2019 実績報告書
    • 査読あり / 国際共著
  • [雑誌論文] Single-Cell Analysis Reveals a Preexisting Drug-Resistant Subpopulation in the Luminal Breast Cancer Subtype2019

    • 著者名/発表者名
      Prieto-Vila Marta、Usuba Wataru、Takahashi Ryou-u、Shimomura Iwao、Sasaki Hideo、Ochiya Takahiro、Yamamoto Yusuke
    • 雑誌名

      Cancer Research

      巻: 79 号: 17 ページ: 4412-4425

    • DOI

      10.1158/0008-5472.can-19-0122

    • 関連する報告書
      2019 実績報告書
    • 査読あり / 国際共著
  • [学会発表] Single-cell Analysis reveals a Preexisting Drug Resistant Subpopulation in Luminal Subtype of Breast Cancer Cells.2019

    • 著者名/発表者名
      Marta Prieto-Vila, Wataru Usuba, Ryou-u Takahashi, Iwao Shimomura, Hideo Sasaki, Takahiro Ochiya and Yusuke Yamamoto
    • 学会等名
      78th Japanese Cancer Association
    • 関連する報告書
      2019 実績報告書
    • 国際学会
  • [学会発表] Single-Cell Analysis Identified a LEF-1 positive Drug-Resistant Subpopulation in Luminal Subtype of Breast Cancer Cells.2019

    • 著者名/発表者名
      Marta Prieto-Vila, Wataru Usuba, Ryou-u Takahashi, Iwao Shimomura, Hideo Sasaki, Takahiro Ochiya and Yusuke Yamamoto
    • 学会等名
      Single cell analyses. Cold Spring Harbour Laboratory conferences.
    • 関連する報告書
      2019 実績報告書
    • 国際学会

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公開日: 2019-04-18   更新日: 2021-01-27  

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