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Comprehensive analysis of recombination auxiliary factors

研究課題

研究課題/領域番号 20K15713
研究種目

若手研究

配分区分基金
審査区分 小区分43010:分子生物学関連
研究機関東京工業大学

研究代表者

Argunhan Bilge  東京工業大学, 科学技術創成研究院, 特任助教 (30792759)

研究期間 (年度) 2020-04-01 – 2021-03-31
研究課題ステータス 中途終了 (2020年度)
配分額 *注記
4,160千円 (直接経費: 3,200千円、間接経費: 960千円)
2021年度: 1,560千円 (直接経費: 1,200千円、間接経費: 360千円)
2020年度: 2,600千円 (直接経費: 2,000千円、間接経費: 600千円)
キーワード相同組換 / DNA二重鎖切断 / DSB 修復 / Rad51 / タンパク質相互作用 / Swi5-Sfr1 / Rad52 / Rad55-Rad57 / DNA repair / Homologous recombination / Rad51 paralog / Auxiliary factor
研究開始時の研究の概要

DNA contains the information that is essential for life; maintaining the integrity of DNA is therefore crucial for every organism. Both internal and external sources are responsible for damaging DNA, but in most cases, the activity of DNA repair proteins renders this damage inconsequential. One such protein is Rad51, which is central to the repair of DNA double-strand breaks, the severest form of DNA damage. There are many other proteins that help Rad51, but the differences in how they help Rad51 is not well understood. This research aims to address this through biochemical approaches.

研究実績の概要

DNA double-strand breaks (DSBs) are the severest form of DNA damage. Homologous recombination (HR) is a mechanism that utilizes identical genetic information located elsewhere in the genome as a template for accurate DSB repair. Rad51 is the central protein in HR, but multiple auxiliary factors are involved in modulating Rad51, including Rad52, Rad54, Rad55-Rad57, and Swi5-Sfr1. These auxiliary factors all bind to Rad51, and this binding is thought to be critical for their role in Rad51 potentiation. Despite this, little is known about the nature of these interactions, especially with regards to Rad55-Rad57.
We originally tried to biochemically characterize Rad55-Rad57. Although we succeeded in purification, we were unable to characterize the interaction in-depth due to the biochemical intractability of Rad55-Rad57. We therefore employed a different approach. Structural analysis of Rad51 highlighted a solvent-exposed protruding acidic patch (PAP) comprised of three residues: E205, E206, D209. Our genetic analysis demonstrated that the E206A mutation specifically impairs the interaction with Rad55-Rad57. Moreover, mutation of all three residues to Ala (Rad51-EED) abrogated the interaction with Rad52, further impaired the interaction with Rad55-Rad57, and even impaired the interaction with Rad54. These results demonstrate that the PAP, a newly identified motif of Rad51, functions as an interaction hub for multiple auxiliary factors to facilitate the potentiation of Rad51. These results provided critical new insights into the regulation of HR by auxiliary factors.

報告書

(1件)
  • 2020 実績報告書
  • 研究成果

    (7件)

すべて 2021 2020 その他

すべて 雑誌論文 (6件) (うち国際共著 3件、 査読あり 6件、 オープンアクセス 6件) 備考 (1件)

  • [雑誌論文] A novel motif of Rad51 serves as an interaction hub for recombination auxiliary factors2021

    • 著者名/発表者名
      Afshar Negar、Argunhan Bilge、Palihati Maierdan、Taniguchi Goki、Tsubouchi Hideo、Iwasaki Hiroshi
    • 雑誌名

      eLife

      巻: 10

    • DOI

      10.7554/elife.64131

    • NAID

      120007124436

    • 関連する報告書
      2020 実績報告書
    • 査読あり / オープンアクセス
  • [雑誌論文] A conserved Ctp1/CtIP C-terminal peptide stimulates Mre11 endonuclease activity2021

    • 著者名/発表者名
      Zdravkovic Aleksandar、Daley James M.、Dutta Arijit、Niwa Tatsuya、Murayama Yasuto、Kanamaru Shuji、Ito Kentaro、Maki Takahisa、Argunhan Bilge、Takahashi Masayuki、Tsubouchi Hideo、Sung Patrick、Iwasaki Hiroshi
    • 雑誌名

      Proceedings of the National Academy of Sciences

      巻: 118 号: 11 ページ: 1-7

    • DOI

      10.1073/pnas.2016287118

    • 関連する報告書
      2020 実績報告書
    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Two auxiliary factors promote Dmc1-driven DNA strand exchange via stepwise mechanisms2020

    • 著者名/発表者名
      Tsubouchi Hideo、Argunhan Bilge、Ito Kentaro、Takahashi Masayuki、Iwasaki Hiroshi
    • 雑誌名

      Proceedings of the National Academy of Sciences

      巻: 115 号: 22 ページ: 17419-17419

    • DOI

      10.1073/pnas.1917419117

    • 関連する報告書
      2020 実績報告書
    • 査読あり / オープンアクセス
  • [雑誌論文] Real-time tracking reveals catalytic roles for the two DNA binding sites of Rad512020

    • 著者名/発表者名
      Ito Kentaro、Murayama Yasuto、Kurokawa Yumiko、Kanamaru Shuji、Kokabu Yuichi、Maki Takahisa、Mikawa Tsutomu、Argunhan Bilge、Tsubouchi Hideo、Ikeguchi Mitsunori、Takahashi Masayuki、Iwasaki Hiroshi
    • 雑誌名

      Nature Communications

      巻: 11 号: 1 ページ: 1-17

    • DOI

      10.1038/s41467-020-16750-3

    • NAID

      120007117439

    • 関連する報告書
      2020 実績報告書
    • 査読あり / オープンアクセス
  • [雑誌論文] Draft Genome Sequence of Naganishia liquefaciens Strain N6, Isolated from the Japan Trench2020

    • 著者名/発表者名
      Han Yong-Woon、Kajitani Rei、Morimoto Hiroya、Palihati Maierdan、Kurokawa Yumiko、Ryusui Rie、Argunhan Bilge、Tsubouchi Hideo、Abe Fumiyoshi、Kajiwara Susumu、Iwasaki Hiroshi、Itoh Takehiko
    • 雑誌名

      Microbiology Resource Announcements

      巻: 9 号: 47

    • DOI

      10.1128/mra.00827-20

    • NAID

      120007124437

    • 関連する報告書
      2020 実績報告書
    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Cooperative interactions facilitate stimulation of Rad51 by the Swi5-Sfr1 auxiliary factor complex.2020

    • 著者名/発表者名
      Argunhan B, Sakakura M, Afshar N, Kurihara M, Ito K, Maki T, Kanamaru S, Murayama Y, Tsubouchi H, Takahashi M, Takahashi H, Iwasaki H.
    • 雑誌名

      eLife

      巻: 9

    • DOI

      10.7554/elife.52566

    • NAID

      120007117502

    • 関連する報告書
      2020 実績報告書
    • 査読あり / オープンアクセス / 国際共著
  • [備考] 相同組換えを活性化するメカニズムを解明

    • URL

      https://www.titech.ac.jp/news/2020/047191

    • 関連する報告書
      2020 実績報告書

URL: 

公開日: 2020-04-28   更新日: 2022-12-28  

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