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Global survey of endogenous substrates for Hero proteins upon proteostasis dysfunction and implication in anti-aggregation strategy.

研究課題

研究課題/領域番号 22K14801
研究種目

若手研究

配分区分基金
審査区分 小区分37030:ケミカルバイオロジー関連
研究機関国立研究開発法人理化学研究所

研究代表者

ChhipiShrestha Jagat  国立研究開発法人理化学研究所, 環境資源科学研究センター, 特別研究員 (40851233)

研究期間 (年度) 2022-04-01 – 2023-03-31
研究課題ステータス 中途終了 (2022年度)
配分額 *注記
4,550千円 (直接経費: 3,500千円、間接経費: 1,050千円)
2023年度: 1,950千円 (直接経費: 1,500千円、間接経費: 450千円)
2022年度: 2,600千円 (直接経費: 2,000千円、間接経費: 600千円)
キーワードHero-proteins / aggregation / proteostasis / Hero protein / protein aggregation
研究開始時の研究の概要

Protein homeostasis is a vital factor to warrant human health and longevity. HEat Resistant Obscure (Hero) proteins have been identified as the factors which
prevents aggregation of several functional client proteins. Yet their substrates are largely unknown. The global suvery could reveal the promising insights on molecular role of Hero proteins in proteostasis balance and therapeutic application. Thus, here, the purpose of this project is to 1) investigate
aggregating proteome upon chaperone and UPS dysfunction, 2) understand aggregating client proteins of Hero proteins.

研究実績の概要

Different chemical insults to mimic proteostatic disbalance such as Proteasome inhibition, autophagy inhibition and chaperone inhibition were used to induce the protein aggregation. Hero proteins were surveyed globally for their natural clients to potentially minimize the aggregation formation by their co-expression. Filter trap method was mostly used to investigate global aggregation and aggregating proteome wide study was extended by mass spectrometry. Top hit aggregating protein candidates which could be possibly co-localized with the Hero proteins were validated such as Hero9 might have essential function in stabilizing the candidate proteins in nucleolus to maintain the ribosome biogenesis. It is still the subject of study what properties of these aggregating proteins could be important for the action of Hero proteins for their disaggregation properties.

Yet number of other aggregating clients for each of the Hero proteins (Hero7, Hero9, Hero11, Hero13, Hero20, Hero45) were studied upon proteasome inhibition system-wide utilizing mass spectrometry after the filter trapping process. This technique is novel approach to study the aggregating proteins in system-wide manner which is essentially modified from the classical technique of filter trapping the aggregates. Further, the future study will imply for the mechanism of endogenous protein stabilization to relieve their potential aggregation and functionality of that proteins preventing the physiological disorders such as neurological disorders.

報告書

(1件)
  • 2022 実績報告書
  • 研究成果

    (3件)

すべて 2022

すべて 雑誌論文 (1件) (うち国際共著 1件、 査読あり 1件、 オープンアクセス 1件) 学会発表 (2件) (うち国際学会 1件)

  • [雑誌論文] Filter trapping protocol to detect aggregated proteins in human cell lines.2022

    • 著者名/発表者名
      Chhipi-Shrestha JK, Yoshida M, and Iwasaki S
    • 雑誌名

      STAR Protoc

      巻: 3(3) 号: 3 ページ: 101571-101571

    • DOI

      10.1016/j.xpro.2022.101571

    • 関連する報告書
      2022 実績報告書
    • 査読あり / オープンアクセス / 国際共著
  • [学会発表] Proteins from translated introns repress global protein synthesis2022

    • 著者名/発表者名
      Jagat Krishna Chhipi Shrestha
    • 学会等名
      23rd Annual meeting of RNA Society of Japan
    • 関連する報告書
      2022 実績報告書
    • 国際学会
  • [学会発表] Splicing modulation produces proteins from introns to induce a proteotoxic stress response2022

    • 著者名/発表者名
      Jagat Krishna Chhipi Shrestha
    • 学会等名
      RIKEN CSRS Annual meeting 2022
    • 関連する報告書
      2022 実績報告書

URL: 

公開日: 2022-04-19   更新日: 2024-04-02  

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