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Understanding specification of neuronal identity through the lens of transcription factors Nhlh1&2

研究課題

研究課題/領域番号 23K05969
研究種目

基盤研究(C)

配分区分基金
応募区分一般
審査区分 小区分46010:神経科学一般関連
研究機関国立遺伝学研究所

研究代表者

ZHU YAN  国立遺伝学研究所, 遺伝形質研究系, 助教 (50464235)

研究期間 (年度) 2023-04-01 – 2026-03-31
研究課題ステータス 交付 (2023年度)
配分額 *注記
4,680千円 (直接経費: 3,600千円、間接経費: 1,080千円)
2025年度: 910千円 (直接経費: 700千円、間接経費: 210千円)
2024年度: 2,080千円 (直接経費: 1,600千円、間接経費: 480千円)
2023年度: 1,690千円 (直接経費: 1,300千円、間接経費: 390千円)
キーワードNhlh1/2 / Lhx2/9 / Isl1 / forebrain / commissural / Robo3 / Nhlh1 and Nhlh2 / Neuronal identiy / regulatory network
研究開始時の研究の概要

In this research, I address the question of what gene regulatory programs specify neuronal attributes that are shared across divergent neuron classes via the lens of a pair of bHLH transcription factors, Nhlh1 and Nhlh2, recently identified by us as a global mechanism to assign axon laterality.

研究実績の概要

The objective of this research is to understand how Nhlh1/2 regulate commissural neuronal fate, and what other functions Nhlh1/2 may have in the differentiation of neurons. I have so far identified regionally-acting molecular mechanisms that intersect with the global Nhlh1/2 mechanism to regulate the axon laterality of commissural neurons. A part of this finding has been incorporated in our recent accepted paper. I have also performed RNA-seq experiments to identify comprehensively the downstream targets of Nhlh1/2. In addition, I have generated epitope-tagged knock-in mouse lines, namely FLAG-Nhlh1 and HA-Nhlh2 mice, which would aid the identification of co-factors and downstream targets.

現在までの達成度 (区分)
現在までの達成度 (区分)

2: おおむね順調に進展している

理由

We were able to uncover regionally-acting modulatory mechanisms of Nhlh1/2 in regulating Robo3 expression by carefully studying literatures and making use of published single cell RNA-seq data from others. We also produced the epitope tag knock-in mouse lines smoothly by collaborating with the mouse unit in our institute.

今後の研究の推進方策

In the second year of this 3 year project, I plan to put our main effort in identifying the role of Nhlh1/2 during the forebrain development. RNA-seq experiment comparing wild type, Nhlh1/2 double mutant or Nhlh1/2 overexpressed forebrain tissues should generate candidate downstream target molecules with which we can generate hypothesis on the function of Nhlh1/2 in this brain region. With the availability of the epitope knock-in mice lines, we can also examine in detail the cell types Nhlh1 and Nhlh2 are expressed in, as well as performing Chip-Seq experiment to pull out downstream target. The above two approaches should generate working model which we can test using the Nhlh1/2 double mutant mice.

報告書

(1件)
  • 2023 実施状況報告書
  • 研究成果

    (2件)

すべて 2024 2023

すべて 雑誌論文 (1件) (うち国際共著 1件、 査読あり 1件、 オープンアクセス 1件) 学会発表 (1件)

  • [雑誌論文] A global gene regulatory program and its region-specific regulator partition neurons into commissural and ipsilateral projection types2024

    • 著者名/発表者名
      Aki Masuda, Kazuhiko Nishida, Rieko Ajima, Yumiko Saga, Marah Bakhtan, Avihu Klar, Tatsumi Hirata, Yan Zhu
    • 雑誌名

      Science Advances

      巻: 10 号: 21

    • DOI

      10.1126/sciadv.adk2149

    • 関連する報告書
      2023 実施状況報告書
    • 査読あり / オープンアクセス / 国際共著
  • [学会発表] Uncovering a novel global transcriptional program and its interaction with local gene regulatory network for the specification of commissural neurons2023

    • 著者名/発表者名
      Yan Zhu
    • 学会等名
      Japanese Society of Neuroscince annula meeting
    • 関連する報告書
      2023 実施状況報告書

URL: 

公開日: 2023-04-13   更新日: 2024-12-25  

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