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Elucidation of the transcriptional pathways in which amino acids act as a nutritional signal

研究課題

研究課題/領域番号 23K13900
研究種目

若手研究

配分区分基金
審査区分 小区分38050:食品科学関連
研究機関筑波大学

研究代表者

Mehrazad・Saber Zahra  筑波大学, 医学医療系, 研究員 (50966182)

研究期間 (年度) 2023-04-01 – 2025-03-31
研究課題ステータス 交付 (2023年度)
配分額 *注記
4,680千円 (直接経費: 3,600千円、間接経費: 1,080千円)
2024年度: 2,210千円 (直接経費: 1,700千円、間接経費: 510千円)
2023年度: 2,470千円 (直接経費: 1,900千円、間接経費: 570千円)
キーワードNutrigenomics / Klf15 / High protein diet
研究開始時の研究の概要

Lifestyle diseases benefit from high protein diet (HPD) in a therapeutic and preventive fashion. Transcriptional regulation is considered one of the main contributors of gene expression regulation process that is followed by diet manipulation. In this project, the mechanism of regulatory role of KLF15 on gene expression induced by high protein uptake in the living liver of mice is analyzed by the in vivo promoter analysis method "in vivo Ad-luc method" and the comprehensive transcription factor search "TFEL scan" method.

研究実績の概要

Regarding the Klf15 independent pathway, based on the RNA-Seq analysis of mice fed HPD vs LPD and Klf15 knockout experiment we determined which of the genes involved in amino acid metabolism have altered regulation in response to lack of Klf15 gene while receiving HPD. The genes that their regulation pattern has not been changed are considered Klf15 independent. Regarding in vivo Ad-Luc analysis of candidate genes that estimated promoter site got linked to luciferase reporter gene and formed and Ad-promotrt-Luc plasmid. The adenovirus was applied in the liver of mice fed HPD. The results showed the activity of Ad-promoter-Luc in response to protein intake, and we acquired the genomic region that functions independently from regulatory role of Klf15.

現在までの達成度 (区分)
現在までの達成度 (区分)

2: おおむね順調に進展している

理由

According to the submitted research plan, progress has been smooth. Regarding KLF15 independent pathways of gene regulation, we determined which of the genes have altered regulation in response to lack of Klf15 gene while receiving HPD. Construction of the Ad-promoter-Luc plasmid was successful. Regarding the in vivo Ad-luc analysis of KLF15 promoter, the experimental methods has been established and the process is expected to go well.

今後の研究の推進方策

Regarding the in vivo Ad-luc analysis of KLF15 promoter, the mechanism of KLF15 expression regulation induced by HPD intake will be analyzed by the in vivo Ad-luc method, and the amino acid-responsive enhancer region that recognizes changes in amino acid composition will be identified. Next, we will identify expression regulators that bind to amino acid-responsive enhancers by the TFEL scan method. The molecular interaction will be clarified by trans omics analysis. By proteome analysis, we will proceed with the elucidation of the identified complex centered on the expression regulator and its molecular modification, and at the same time, superimpose the metabolome analysis results of the amino acid metabolites in the nucleus to regulate the expression.

報告書

(1件)
  • 2023 実施状況報告書
  • 研究成果

    (2件)

すべて 2023

すべて 雑誌論文 (1件) (うち査読あり 1件、 オープンアクセス 1件) 学会発表 (1件)

  • [雑誌論文] <scp>GR‐KLF15</scp> pathway controls hepatic lipogenesis during fasting2023

    • 著者名/発表者名
      Takeuchi Y, Murayama Y, Aita Y, Mehrazad Saber Z, Karkoutly S, Tao D, Katabami K, Ye C, Shikama A, Masuda Y, Izumida Y, Miyamoto T, Matsuzaka T, Kawakami Y, Shimano H, Yahagi N.
    • 雑誌名

      The FEBS Journal

      巻: 291 号: 2 ページ: 259-271

    • DOI

      10.1111/febs.16957

    • 関連する報告書
      2023 実施状況報告書
    • 査読あり / オープンアクセス
  • [学会発表] in vivo Ad-luc法とTFEL scan法を用いたニュートリゲノミクスへのアプローチ2023

    • 著者名/発表者名
      武内謙憲、矢作直也、會田雄一、Mehrazad Saber Zahra、Karkoutly Samia、Tao Duhan、方波見京香、Ye Chen、Wang Xinyu、村山友樹、志鎌明人、升田紫、泉田欣彦、川上康、島野仁
    • 学会等名
      第46回日本分子生物学会年会(2023年12月6~8日, 神戸)
    • 関連する報告書
      2023 実施状況報告書

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公開日: 2023-04-13   更新日: 2024-12-25  

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