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2015 年度 実施状況報告書

Study on cold and heat denaturation of amyloid fibrils of intrinsically disordered alpha-synuclein

研究課題

研究課題/領域番号 15K18518
研究機関大阪大学

研究代表者

李 映昊  大阪大学, たんぱく質研究所, 講師 (70589431)

研究期間 (年度) 2015-04-01 – 2017-03-31
キーワードAlpha-synuclein / Amyloid fibril / Cold denaturation / Heat denaturation / Kinetics / Protein aggregation / Protein misfolding / Thermodynamics
研究実績の概要

The stability of amyloid fibrils remains poorly understood. Thus, I studied the conformational stability of amyloid fibrils of alpha-synuclein (aSN) against the temperature change as a model system. I examined cold and heat denaturation of aSN amyloid fibrils prepared at various temperature (298, 310, 323, 333, and 343 K). At all temperature, the formation of typical amyloid fibrils was confirmed by ThT assay, far-UV CD spectra, and AFM images. As temperature increased from 298 to 383 K, all types of fibrils heat-denatured to monomers from approximately 343 K. Decreasing temperature from 298 to 273 K caused cold denaturation of fibrils to monomers. Intriguingly, the stability of aSN fibrils depended on temperature of preparation of aSN fibrils. aSN fibrils generated at higher temperature showed higher stability at high and low temperature than fibrils formed at lower temperature. The stability of aSN fibrils prepared at higher temperature against chemical stress also was higher than that of fibrils formed at lower temperature. Kinetics of cold and heat denaturation of individual aSN fibrils with and without a denaturant were also traced. As temperature where aSN fibrils grow became higher, fibrils showed faster denaturation. Even with a chemical denaturant, similar trends of denaturation kinetics were observed. Overall, the stability of aSN amyloid fibrils depended on growing temperature of fibrils.

現在までの達成度 (区分)
現在までの達成度 (区分)

2: おおむね順調に進展している

理由

The study on cold and heat denaturation of aSN amyloid fibrils has well been performed as I planned without problems. I clearly revealed that aSN amyloid fibrils denatured to soluble monomers at high and low temperature and growing temperature influenced largely the conformational stability of aSN amyloid fibrils. Several approaches will be performed for elucidating factors which control the conformational stability of aSN fibrils against temperature change in the following section.

今後の研究の推進方策

In order to elucidate the mechanism and factor for cold and heat denaturation of aSN amyloid fibrils, following experiments will be performed.
1. Checking reversibility to ensure the thermodynamic analysis: after cold and heat denaturation of fibrils, temperature will be set to the original temperature, and the reformation of fibrils will be monitored.
2. Conformational analysis of aSN amyloid fibrils: (1) The secondary structure of aSN amyloid fibrils prepared at distinct temperature will be examined by Fourier transform infrared spectrometry. (2) The morphology of each aSN amyloid fibril will be analyzed using the high-resolution EM at the single fibril level. (3) The core regions of individual aSN fibrils will be examined by proteolysis and mass spectrometry.
In order to enhance pathological and biological relevance of the present study, cold and heat denaturation behaviors of amyloid fibrils of aSN mutants as well as roles of the membrane and crowding effect on the conformational stability of aSN fibrils will be also investigated.

次年度使用額が生じた理由

実験の進行状態、結果そして効率の良い研究費の使用を考慮し、3月末に試料を購入する必要が生じたた。

次年度使用額の使用計画

残額「101,368円」に関しては、future planで計画しているmembraneを摸倣したvesicleを作製するための材料および試薬の購入に主に使用する予定であり、既に注文してある。

  • 研究成果

    (14件)

すべて 2016 2015 その他

すべて 国際共同研究 (4件) 雑誌論文 (4件) (うち国際共著 4件、 査読あり 3件、 謝辞記載あり 4件) 学会発表 (5件) (うち招待講演 5件) 図書 (1件)

  • [国際共同研究] Eotvos Lorand University(Hungary)

    • 国名
      ハンガリー
    • 外国機関名
      Eotvos Lorand University
  • [国際共同研究] University of Michigan(米国)

    • 国名
      米国
    • 外国機関名
      University of Michigan
  • [国際共同研究] University of Leeds(英国)

    • 国名
      英国
    • 外国機関名
      University of Leeds
  • [国際共同研究] Malvern(英国)

    • 国名
      英国
    • 外国機関名
      Malvern
  • [雑誌論文] A linker for the isopeptide mimetics by the peptide ligation2016

    • 著者名/発表者名
      Kawakami Toru, Mishima Yuichi, Kinoshita Misaki, Lee Young-Ho, Suetake Isao
    • 雑誌名

      Tetrahedron Letters

      巻: - ページ: 印刷中

    • DOI

      -

    • 査読あり / 国際共著 / 謝辞記載あり
  • [雑誌論文] Amorphous Aggregation of Cytochrome c with Inherently Low Amyloidogenicity Is Characterized by the Metastability of Supersaturation and the Phase Diagram2016

    • 著者名/発表者名
      Lin Yuxi, Kardos József, Imai Mizue, Ikenoue Tatsuya, Kinoshita Misaki, Sugiki Toshihiko, Ishimori Koichiro, Goto Yuji, and Lee Young-Ho
    • 雑誌名

      Langmuir

      巻: 32 ページ: 2010-2022

    • DOI

      10.1021/acs.langmuir.5b03810

    • 査読あり / 国際共著 / 謝辞記載あり
  • [雑誌論文] X-ray Structure and Nuclear Magnetic Resonance Analysis of the Interaction Sites of the Ga-Substituted Cyanobacterial Ferredoxin2015

    • 著者名/発表者名
      Mutoh Risa, Muraki Norifumi, Shinmura Kanako, Kubota-Kawai Hisako, Lee Young-Ho, Marc M. Nowaczyk, Matthias Rögner, Hase Toshiharu, Ikegami Takahisa, Kurisu Genji
    • 雑誌名

      Biochemistry

      巻: 54 ページ: 6052-6061

    • DOI

      10.1021/acs.biochem.5b00601

    • 査読あり / 国際共著 / 謝辞記載あり
  • [雑誌論文] Physicochemical Nature of Interfaces Controlling Ferredoxin NADP+ Reductase Activity through Its Interprotein Interactions with Ferredoxin2015

    • 著者名/発表者名
      Kinoshita Misaki, Kim Ju Yaen, Kume Satoshi, Sakakibara Yukiko, Sugiki Toshihiko, Kojima Chojiro, Kurisu Genji, Ikegami Takahisa, Hase Toshiharu, Kimata-Ariga Yoko, Lee Young-Ho
    • 雑誌名

      Biochimica et Biophysica Acta-Bioenergetics

      巻: 1847 ページ: 1200-1211

    • DOI

      10.1016/j.bbabio.2015.05.023

    • 国際共著 / 謝辞記載あり
  • [学会発表] Principle of protein misfolding and aggregation ‐ new findings of amyloid formation from thermodynamics2016

    • 著者名/発表者名
      Lee Young-Ho
    • 学会等名
      RIKEN CLST invited seminar
    • 発表場所
      Kobe, Japan
    • 年月日
      2016-03-18 – 2016-03-18
    • 招待講演
  • [学会発表] The interaction of sulfite reductase with ferredoxin and its relation to enzyme activity2016

    • 著者名/発表者名
      Lee Young-Ho
    • 学会等名
      Invited seminar in Hokkaido University
    • 発表場所
      Hokkaido, Japan
    • 年月日
      2016-03-12 – 2016-03-12
    • 招待講演
  • [学会発表] Thermodynamic study on interprotein interaction between oppositely-charged electron transfer proteins2016

    • 著者名/発表者名
      Lee Young-Ho
    • 学会等名
      Institute for Protein Research seminar
    • 発表場所
      Osaka, Japan
    • 年月日
      2016-02-02 – 2016-02-03
    • 招待講演
  • [学会発表] The study on thermodynamic property of protein misfolding and aggregation2015

    • 著者名/発表者名
      Lee Young-Ho
    • 学会等名
      第38回日本分子生物学会・第88回日本生化学会大会
    • 発表場所
      Kobe, Japan
    • 年月日
      2015-12-01 – 2015-12-04
    • 招待講演
  • [学会発表] Toward the establishment of thermodynamics on protein misfolding and aggregatio2015

    • 著者名/発表者名
      Lee Young-Ho
    • 学会等名
      Open seminar in Osaka Prefecture University
    • 発表場所
      Osaka, Japan
    • 年月日
      2015-04-22 – 2015-04-22
    • 招待講演
  • [図書] Methods in Molecular Biology (In vitro mutagenesis: Methods and Protocol)2016

    • 著者名/発表者名
      Kinoshita Misaki, Kim Ju Yaen, Lin Yuxi, Natalia Markova, Toshiharu Hase, Lee Young-Ho
    • 総ページ数
      500
    • 出版者
      Springer Science+Business Media

URL: 

公開日: 2017-01-06   更新日: 2022-02-03  

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