| 研究課題/領域番号 |
17F17797
|
|---|
| 研究機関 | 東京大学 |
|---|
研究代表者 |
中井 謙太 東京大学, 医科学研究所, 教授 (60217643)
|
|---|
| 研究分担者 |
BERTHIER VINCENT 東京大学, 医科学研究所, 外国人特別研究員
|
|---|
| 研究期間 (年度) |
2017-11-10 – 2020-03-31
|
| キーワード | Optimization / Genetic Algorithm / DNA / motif finding |
|---|
| 研究実績の概要 |
In the past four month since I've arrived in the Functional Analysis in Silico Lab (Nakai Lab), I've dedicated my research to familiarize myself with the domain by developping a new algorithm able to identify target motifs in DNA. The methos is novel, and has now been tested on artificial data. At the moment, I am in the process of evaluating and tweaking the algorithm on a community approved testbed.
If the results there are as good as hoped, I will write a paper in the next couple of months.
|
| 現在までの達成度 (区分) |
現在までの達成度 (区分)
2: おおむね順調に進展している
理由
The first goals where well defined and I quickly got access to everything I needed to allow me to reach the objectives.
|
| 今後の研究の推進方策 |
In this year, the goal will be to improve the techniques already used, first to increase their performances, and second to allow them to be more robust, making them usable on a wider domain. This will necessitate a lot of computing power, requiring a very good working station with a high number of efficient CPU cores. Speeding up this process could require access to a computing cluster.
|
